HHsearch alignment for GI: 254780153 and conserved domain: PRK05968
>PRK05968 hypothetical protein; Provisional.
Probab=99.37 E-value=3.6e-10 Score=84.01 Aligned_cols=284 Identities=14% Similarity=0.107 Sum_probs=171.3
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
T Consensus 61 ~NPT~~~lE~~l---a~LEgg~~---a-~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~v~~v 133 (389)
T PRK05968 61 DNPTVRAFEEML---AKLEGAED---A-RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAYRLFGTLLKRMGVEVDYV 133 (389)
T ss_pred CCHHHHHHHHHH---HHHHCCCE---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 886699999999---99829963---8-8854889999999999608999898588766758999998886078469996
Q ss_pred ECCCCCCCCHHHCCCC-CCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf 0577765786767855-657997420242022032---0--3502568614886401--101102545568579997001
Q gi|254780153|r 121 TAPYGSLPDFSKVDFD-RDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ 192 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~~-~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ 192 (391)
T Consensus 134 d~~-----d~~~~~~~i~~Tklv~~EtpsNP~l~v~DI~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~T 207 (389)
T PRK05968 134 DGR-----DEEAVAKALPGAKLLYLESPTSWVFELQDIAALAALAKRHGVVTVIDNSWASPVFQRPITL-GVDLVIHSAS 207 (389)
T ss_pred CCC-----CHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHHH-CCCEEEEECC
T ss_conf 899-----9999996276872899978999887273899999999983995999778611642584240-7987997045
Q ss_pred HCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 200176651--544567788876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r 193 KVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS 270 (391)
Q Consensus 193 K~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~ 270 (391)
T Consensus 208 Kyi~GHsDvl~G~v~~~~~~~~~~~~~~--------------~-----~~lG~---~lsP~~a~l~lRGL------~TL~ 259 (389)
T PRK05968 208 KYLGGHSDTVAGVVAGSKEHIARINAEA--------------Y-----PYLGG---KLSPFEAWLLLRGL------RTLP 259 (389)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHH--------------H-----HHCCC---CCCHHHHHHHHCCC------CCHH
T ss_conf 3446898844269945699999999999--------------9-----86277---78858889998479------8699
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---------CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE
Q ss_conf 999999977999999987479716766882003---------65317898247310113734567888999998886282
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENLAVDETTR---------SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEI 341 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r---------S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~ 341 (391)
T Consensus 260 lRm~rh~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~~~l~g~gg~~sf~l~~~~-----------~~~~f~~~L~lf~~ 327 (389)
T PRK05968 260 LRMKAHEASALLIARRLKAHPVVETV-CHPALANHPPAGLSGTSGLFSFIFREGV-----------DVRRFADALKLFRL 327 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCHHHHCCCCCEEEEEEECCHH-----------HHHHHHHHCCCCEE
T ss_conf 99999999999999999619998663-3888522313421786437999957779-----------99999984880756
Q ss_pred EECCCCCCCC--------------------C--C-EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8726655676--------------------7--5-056861588899999999999999999999
Q gi|254780153|r 342 AYDIGSYRDA--------------------P--L-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 342 ~~~~~~~r~~--------------------~--~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
T Consensus 328 a~SlGg~eSLi~~~~~~~~~~~~~~~~~~~Gi~~~liRlSVG----lEd~eDLi~Dl~qAL~~a~ 388 (389)
T PRK05968 328 GVSWGGHESLVVPAEVVLQQKAQPNSAARFGISPRSVRLHVG----LEGTEALWADLEQALAAAS 388 (389)
T ss_pred ECCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHHC
T ss_conf 316686430218706641677998899865969496999931----0999999999999999843