HHsearch alignment for GI: 254780153 and conserved domain: PRK06062
>PRK06062 hypothetical protein; Provisional.
Probab=99.14 E-value=1.4e-07 Score=67.58 Aligned_cols=327 Identities=12% Similarity=0.089 Sum_probs=165.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC--CCCCCEEEEEECC
Q ss_conf 96899998632103653289889-99999999999999688998579997487348999875320--5789707997073
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL--LGYRGVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl--~~~~~~~~~~~g~ 100 (391)
T Consensus 54 ~p~-i~~Ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~--p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~ 130 (434)
T PRK06062 54 HPK-VVAAIQEQAARLCTVAPAHANDARSEAARLIAERA--PGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRS 130 (434)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 799-99999999975476467524599999999999747--777587998378438999999999985299837664046
Q ss_pred HHHHHHHHHHHC----------CCCCEEEEECCC------CCCCC-------HHHC------CCCCCEEEEEEECCCC--
Q ss_conf 688888765323----------876306740577------76578-------6767------8556579974202420--
Q gi|254780153|r 101 FGLGWMSDIRQL----------SLQDVREFTAPY------GSLPD-------FSKV------DFDRDVVFVWNGTTSG-- 149 (391)
Q Consensus 101 ~~~r~~~~~~~~----------~~~~~~~~~~~~------g~~~~-------~~~~------~~~~~v~~~h~ETstG-- 149 (391)
T Consensus 131 yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~~iAAvivEPiqg~g 210 (434)
T PRK06062 131 YHGGTGTAINLTGDPRRWPNDTGNAGVVHFFGPFLYRSSFHATTEEEECERALAHLERVIALEGPSTIAAIVLESVPGTA 210 (434)
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
T ss_conf 67886520784068201468888899534158876676677888689999999999999985199977999947867889
Q ss_pred -EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHH
Q ss_conf -22032------035025686148864011011025---4--5568579997001200176-651544567788876541
Q gi|254780153|r 150 -VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEK 216 (391)
Q Consensus 150 -v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~ 216 (391)
T Consensus 211 G~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~e~~gv~PDiv~~gK~l~gG~~Plsav~~~~~i~~~~~~ 290 (434)
T PRK06062 211 GIMVPPPGYLAGVRELCDRHGIVFIADEVMAGFGRTGKWFAIEHFDVVPDLITFAKGVNSGYVPLGGVAISEAIADTFAD 290 (434)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHCCCCCCEEEEEECHHHHHHHCC
T ss_conf 98668767876899999985950674643227876666421005897976210103314887761788745999987422
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH-HH-HHHHHHHHHHHCCCCC
Q ss_conf 144577831232001123210334786446664488999999998620103189999999-97-7999999987479716
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERC-NA-NAAVLFQFIQENDWIE 294 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~-~~-~a~~l~~~i~~~~~~~ 294 (391)
T Consensus 291 ----~~----------------~~~g~T~~Gnpl-a~Aaa~a~L~~i~~~-~l~~~~~~~G~~~l~~~L~~l~~~~---- 344 (434)
T PRK06062 291 ----RP----------------YPGGLTYSGHPL-ACAAAVATINAMEEE-GIVENAARIGAEVLGPGLRELAERH---- 344 (434)
T ss_pred ----CC----------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_conf ----67----------------567878889879-999999999999735-8999999999999999999998658----
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 7668820036531789824731011373--45678889999988862828726655676750568615888999999999
Q gi|254780153|r 295 NLAVDETTRSNTSICMKIVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLC 372 (391)
Q Consensus 295 ~~~~~~~~rS~~~v~~~~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~ 372 (391)
T Consensus 345 p~v~~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-----gn~irl~PpL~it~~eid~~l 419 (434)
T PRK06062 345 PSVGEVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGL 419 (434)
T ss_pred CCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----CCEEEEECCCCCCHHHHHHHH
T ss_conf 986888616626999982264435555544332799999999999799278335-----998999789238899999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 373 DWLRWVFYFQKI 384 (391)
Q Consensus 373 ~aLe~~~~~~k~ 384 (391)
T Consensus 420 ~~l~~al~~~~a 431 (434)
T PRK06062 420 AILDAALAVADA 431 (434)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999998765