HHsearch alignment for GI: 254780153 and conserved domain: PRK06541
>PRK06541 hypothetical protein; Provisional.
Probab=99.16 E-value=2.4e-07 Score=66.15 Aligned_cols=330 Identities=11% Similarity=0.029 Sum_probs=170.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------CC-CCC-E
Q ss_conf 968999986321036532898-89-99999999999999688998579997487348999875320------57-897-0
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------LG-YRG-V 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~~-~~~-~ 93 (391)
T Consensus 70 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~f~~SGsEA~E~AiklAr~y~~~~G~~~r~~ 146 (460)
T PRK06541 70 RAE-LAEAAAEQAGTLAFFPLWSYAHPPAIELAERLAALA--PGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHK 146 (460)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 899-999999999757875677557879999999999748--88869899708748999999999999999619998618
Q ss_pred EEEEECCHHHHHHHHHHHCCCC-----------CEEEEECCC-------CCCCC------HHHC------CCCCCEEEEE
Q ss_conf 7997073688888765323876-----------306740577-------76578------6767------8556579974
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQ-----------DVREFTAPY-------GSLPD------FSKV------DFDRDVVFVW 143 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~-----------~~~~~~~~~-------g~~~~------~~~~------~~~~~v~~~h 143 (391)
T Consensus 147 iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavI 226 (460)
T PRK06541 147 VISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRAPEHGDDPEAFGRWAADRIEEAIEFEGPDTVAAVF 226 (460)
T ss_pred EEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 99966871678657887518800037887889991676888644577678998899999999999999851998578998
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf 202420---22032------035025686148864011011025---4--5568579997001200176-6515445677
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP 208 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~ 208 (391)
T Consensus 227 ~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVqtGfGRtG~~fa~e~~gv~PDiv~~gKglg~G~~Pl~av~~~~ 306 (460)
T PRK06541 227 LEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASD 306 (460)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCH
T ss_conf 45777878865686899999999746479537667512078653373220168948951412231258877704674039
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
T Consensus 307 ~i~~~~~~---~~~---------------~~~hg~T~~gnpl-a~aaa~avL~~i~~~~----l~~~v~~~G~~l~~~L~ 363 (460)
T PRK06541 307 RLVEPFLD---GKT---------------MFLHGYTFGGHPV-SAAVALANLDIFEREG----LLDHVRDNEPAFRATLE 363 (460)
T ss_pred HHHHHHCC---CCC---------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHH
T ss_conf 99876526---885---------------3135767888989-9999999999998657----99999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCEEE-EEE-CCCCCCCC-CHHHHHHHHHH-HHHHHHHCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 479716766882003653178-982-47310113-73456788899-999888628287266556767505686158889
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSIC-MKI-VDSDIASL-DINSQKSFCKS-MLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVE 364 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~-~~~-~d~~~~~~-~~~~~~~~~~~-~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~ 364 (391)
T Consensus 364 ~l~~-~p~v~--dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~~--~~~virl~PPL~it 438 (460)
T PRK06541 364 KLLD-LPIVG--DVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDR--GDPVVQLAPPLISG 438 (460)
T ss_pred HHHC-CCCEE--EEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCC--CCCEEEEECCEECC
T ss_conf 9746-99778--7410773899995457654566764677899999999999978959974589--99889997893378
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999
Q gi|254780153|r 365 KEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 365 ~~dv~~L~~aLe~~~~~~k~ 384 (391)
T Consensus 439 ~~eid~~l~~l~~aL~e~~~ 458 (460)
T PRK06541 439 QEEFDEIEAILRSVLTEAWR 458 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999996