HHsearch alignment for GI: 254780153 and conserved domain: TIGR01976
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=99.78 E-value=7.2e-16 Score=120.25 Aligned_cols=332 Identities=17% Similarity=0.131 Sum_probs=229.0
Q ss_pred CCC-CCCCCCCCHHHHHHHHHHHCC-------CCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC--HHHHHH
Q ss_conf 886-888776896899998632103-------653289-889999999999999996889985799974873--489998
Q gi|254780153|r 14 PFF-SSGPCAKRPGWSLGILEGALL-------GRSHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASD--TGAVEM 82 (391)
Q Consensus 14 ~~F-~pGP~~~~p~~v~~~~~~~~l-------~~sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~Gsg--T~~~ea 82 (391)
T Consensus 23 ~~~DnpAG~q~-Pq~V~dAv~~~L~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~G~~~T~L~~~ls~ 101 (410)
T TIGR01976 23 VFFDNPAGTQI-PQSVLDAVSAALTRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVFGANATSLAYLLSR 101 (410)
T ss_pred EEEECCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHH
T ss_conf 89757888877-73479999999874130137677663068999999999999997267988856767866899999999
Q ss_pred HHHHCCCCCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCC-CCHHHC-----CCCCCEEEEEEECCCCEEEC
Q ss_conf 7532057897079970---73688888765323876306740577765-786767-----85565799742024202203
Q gi|254780153|r 83 ALWSLLGYRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSL-PDFSKV-----DFDRDVVFVWNGTTSGVCVP 153 (391)
Q Consensus 83 ~~~nl~~~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~-----~~~~~v~~~h~ETstGv~~~ 153 (391)
T Consensus 102 a~~~~~~~GDEvivt~LDHeaNispW~~~a~~~G-a~Vkw~~~d~~~~~L~~~~L~~Lls~rTRLVAvt~ASn~~Gs~~d 180 (410)
T TIGR01976 102 ALSRRWGPGDEVIVTRLDHEANISPWLQAAEDAG-AKVKWARVDEADGELHPDDLASLLSPRTRLVAVTAASNLLGSIVD 180 (410)
T ss_pred HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
T ss_conf 9851268985589716766001368999998389-789996336231544869982366882255562344023255115
Q ss_pred CEEE--ECCCCCCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 2035--02568614886401101102545--5685799970012001766515445677888765411445778312320
Q gi|254780153|r 154 DVGF--IPESREGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 154 ~~~~--~~~~~~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
T Consensus 181 l~A~~~~vh~aGA~v~VDaVhyaPH~L~Dvqa~gaD~l~cSaYK~f-GPH-~G~l~~R~~~~~~l~~~k~~~~------~ 252 (410)
T TIGR01976 181 LAALTELVHAAGALVYVDAVHYAPHGLIDVQALGADFLVCSAYKFF-GPH-LGILWGRPELLKSLPPYKLEFS------E 252 (410)
T ss_pred HHHHHHHHHHCCCEEEECHHHHCCCCCCCHHHHCCCEEEECCEECC-CCC-EEEEEECHHHHCCCCCCCCCCC------C
T ss_conf 8899999987598798811100456664134227887998563116-885-0178711466404687633677------8
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----C-------------HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 01123210334786446664488999999998620103----1-------------899999999779999999874797
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG----G-------------LSACVERCNANAAVLFQFIQENDW 292 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g----G-------------l~~~~~r~~~~a~~l~~~i~~~~~ 292 (391)
T Consensus 253 ----d~~P~r~E---~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~~~Ll~~L~~~P~ 325 (410)
T TIGR01976 253 ----DTGPERFE---LGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLAERLLAGLSDLPG 325 (410)
T ss_pred ----CCCCCEEE---ECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf ----88885145---14556026789999999999823210689886558999999999999999999999999874895
Q ss_pred CCCCCC---C-CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-C-----CCC-----CCEEEE
Q ss_conf 167668---8-200365317898247310113734567888999998886282872665-5-----676-----750568
Q gi|254780153|r 293 IENLAV---D-ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-Y-----RDA-----PLGLRV 357 (391)
Q Consensus 293 ~~~~~~---~-~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~-----r~~-----~~~~RI 357 (391)
T Consensus 326 ~t~yG~~d~~R~~~RvP-Tv~F~v~~~~------------P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~~GvvR~ 392 (410)
T TIGR01976 326 VTVYGVQDEKRLAERVP-TVAFTVAGLS------------PQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEADGGVVRV 392 (410)
T ss_pred EEEECHHHHHHHHHCCC-EEEEEECCCC------------HHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCEEEE
T ss_conf 69973557864642597-5889727878------------7999999853686331264116899986589898873898
Q ss_pred ECCCCCCHHHHHHHHHHH
Q ss_conf 615888999999999999
Q gi|254780153|r 358 WVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 358 g~~g~i~~~dv~~L~~aL 375 (391)
T Consensus 393 gLaHY~t~eevd~l~~aL 410 (410)
T TIGR01976 393 GLAHYNTAEEVDRLLEAL 410 (410)
T ss_pred EECCCCCHHHHHHHHHCC
T ss_conf 525779889999998509