RPS-BLAST 2.2.22 [Sep-27-2009]
Database: mmdb70
33,805 sequences; 4,956,049 total letters
Searching..................................................done
Query= gi|254780156|ref|YP_003064569.1| putative
inositol-1-monophosphatase [Candidatus Liberibacter asiaticus str.
psy62]
(256 letters)
>2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor,
dimerization, hydrolase; 1.90A {Escherichia coli} (A:)
Length = 267
Score = 172 bits (437), Expect = 3e-44
Identities = 87/256 (33%), Positives = 146/256 (57%), Gaps = 5/256 (1%)
Query: 6 LLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGARPKYG 65
+LN+ V AA KAG +++++ ++ S+KG +DFV + +I + + P++
Sbjct: 4 MLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHT 63
Query: 66 FYSG-GKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFNPITDE 124
+ G D +W++DPL+G TNF +PHF +SIA+ +V+++P+ +E
Sbjct: 64 IITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNE 123
Query: 125 LYTAERGIGSFLNDRRIRVSSRRILSNSIIC----YATFKRNSRFLMQLCRIMDEAVGVR 180
L+TA RG G+ LN R+R S+ R L +I+ + + + ++ + ++ +E R
Sbjct: 124 LFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECADFR 183
Query: 181 SFGSEALDLAYIAAGRFDGFLGKGLSIWCVAAGLLIICEAGGFATDFLGKNMGAETKSII 240
+ GS ALDLAY+AAGR DGF GL W AAG L++ EAGG +DF G + T +I+
Sbjct: 184 ATGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIV 243
Query: 241 SGNMPIHEQLLAIIND 256
+GN + + +LA + D
Sbjct: 244 AGNPRVVKAMLANMRD 259
>2pcr_A Inositol-1-monophosphatase; bipolar disorder, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; 2.60A {Aquifex aeolicus VF5}
(A:)
Length = 264
Score = 170 bits (430), Expect = 2e-43
Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 4 SALLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGARPK 63
L V AAL G+ L +FG+V+ + KG DFV +E I + +L P
Sbjct: 5 KKYLEVAKIAALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILKFFPD 64
Query: 64 YGFYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFNPITD 123
+ G S RW +DPL+G N+ P F +S+ L + +E I ++ P D
Sbjct: 65 HEVVGEEXGAEGSGSEYRWFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYFD 124
Query: 124 ELYTAERGIGSFLNDRRIRVSSRRILSNSIIC----YATFKRNSRFLMQLCRIMDEAVGV 179
+LY +G+G+++N +RI+V L ++ + + + S +L + E
Sbjct: 125 KLYWGAKGLGAYVNGKRIKVKDNESLKHAGVVYGFPSRSRRDISIYLNIFKDVFYEVGSX 184
Query: 180 RSFGSEALDLAYIAAGRFDGFLGKGLSIWCVAAGLLIICEAGGFATDFLGKNMGAETKSI 239
R G+ A+DL +A G FDG W + AGL+I+ EAGG T I
Sbjct: 185 RRPGAAAVDLCXVAEGIFDGXXEFEXKPWDITAGLVILKEAGGVYTLVGE---PFGVSDI 241
Query: 240 ISGNMPIHEQLLAIIND 256
I+GN +H+ +L +
Sbjct: 242 IAGNKALHDFILQVAKK 258
>2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha
sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis
H37RV} (A:)
Length = 299
Score = 168 bits (425), Expect = 8e-43
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 27/282 (9%)
Query: 1 MSRSA-----LLNVMVSAALKAGKFLSRDFGEVQDLQ---------VSRKGPSDFVMKSH 46
M+R L +V + A +A F+ EV + ++ P+D V
Sbjct: 1 MTRPDNEPARLRSVAENLAAEAAAFVRGRRAEVFGISRAGDGDGAVRAKSSPTDPVTVVD 60
Query: 47 SKCQEIIYQELLGARPKYGF-----YSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFC 101
+ + ++ L RP W++DP++G NF Y IP +
Sbjct: 61 TDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYA 120
Query: 102 ISIALERDQEIIASVIFNPITDELYTAERGIGSFLND----RRIRVSSRRILSNSIICY- 156
+SI + +A + + +Y+A G+G+ L D +R + LS +++
Sbjct: 121 VSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTG 180
Query: 157 --ATFKRNSRFLMQLCRIMDEAVGVRSFGSEALDLAYIAAGRFDGFLGKGLSIWCVAAGL 214
+ + + L ++ VR GS ALDL +AAGR D + G+ +W AAG
Sbjct: 181 FGYSVRCREKQAELLAHVVPLVRDVRRIGSAALDLCMVAAGRLDAYYEHGVQVWDCAAGA 240
Query: 215 LIICEAGGFATDFLGKNMGAETKSIISGNMPIHEQLLAIIND 256
LI EAG + G +++ I ++LLA +
Sbjct: 241 LIAAEAGARVLLSTPRAGG-AGLVVVAAAPGIADELLAALQR 281
>2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A
{Thermotoga maritima MSB8} PDB: 2p3v_A* (A:)
Length = 256
Score = 166 bits (420), Expect = 3e-42
Identities = 78/251 (31%), Positives = 122/251 (48%), Gaps = 5/251 (1%)
Query: 6 LLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGARPKYG 65
L+ + K G L +G V D + G D V + + Q +I E+ P
Sbjct: 3 RLDFSIKLLRKVGHLLMIHWGRV-DNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDEN 61
Query: 66 FYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFNPITDEL 125
+ + + WI+DP++G NF + +P+F IS+A + E+ V+ P +E
Sbjct: 62 I--MAEEGIFEKGDRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNET 119
Query: 126 YTAERGIGSFLNDRRIRVSSRRILSNSIICYATFKRNSRFLMQLCRIMDEAVGVRSFGSE 185
AE G G+F N RIRVS L + T + R+ +R GS
Sbjct: 120 LYAEEGSGAFFNGERIRVSENASLEECVGS--TGSYVDFTGKFIERMEKRTRRIRILGSA 177
Query: 186 ALDLAYIAAGRFDGFLGKGLSIWCVAAGLLIICEAGGFATDFLGKNMGAETKSIISGNMP 245
AL+ AY+ AGR D F+ ++ W +AAGL+I+ EAGG TDF GK A +K+ I N
Sbjct: 178 ALNAAYVGAGRVDFFVTWRINPWDIAAGLIIVKEAGGMVTDFSGKEANAFSKNFIFSNGL 237
Query: 246 IHEQLLAIIND 256
IH++++ ++N+
Sbjct: 238 IHDEVVKVVNE 248
>2fvz_A Inositol monophosphatase 2; inositol metabolism, structural
genomics, structural genomics consortium, SGC,
hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A
2czk_A 2ddk_A (A:)
Length = 273
Score = 165 bits (417), Expect = 7e-42
Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 12/261 (4%)
Query: 6 LLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGARPKYG 65
V AL+AG+ + + E ++ +D V ++ +++I EL P +
Sbjct: 4 CFQAAVQLALRAGQIIRKALTEE-KRVSTKTSAADLVTETDHLVEDLIISELRERFPSHR 62
Query: 66 FYS----GGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFNPI 121
F + A WI+DP++G NF + P +SI QE+ VI++
Sbjct: 63 FIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCT 122
Query: 122 TDELYTAERGIGSFLNDRRIRVSSRRILSNSIICYATFKRNSRFLMQL------CRIMDE 175
+ LYT RG G+F N +R+RVS LS +++ + ++L + +
Sbjct: 123 EERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAK 182
Query: 176 AVGVRSFGSEALDLAYIAAGRFDGFLGKGLSIWCVAAGLLIICEAGGFATDFLGKNMGAE 235
A GVR GS L L ++A+G D + GL W +AA +II EAGG D G +
Sbjct: 183 AHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLM 242
Query: 236 TK-SIISGNMPIHEQLLAIIN 255
+ + + + +
Sbjct: 243 ACRVVAASTREMAMLIAQALQ 263
>1vdw_A Hypothetical protein PH1897; homodimer, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, unknown function; 1.30A {Pyrococcus
horikoshii} (A:)
Length = 254
Score = 164 bits (416), Expect = 8e-42
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 20/264 (7%)
Query: 1 MSRSALLNVMVSAALKAGKFLSRDFGEVQDLQ-VSRKGPSDFVMKSHSKCQEIIYQELLG 59
MS + + + FG + + +S D + II +
Sbjct: 1 MSVKTWRKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKF-- 58
Query: 60 ARPKYGFYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFN 119
S + Q S +VDPL+G NF IP F +S+A+ +++ I + I+
Sbjct: 59 KDLGVNVVSEEIGRIDQGSDYTVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYE 118
Query: 120 PITDELYTAERGIGSFLNDRRIRVSSRRILSNSIICYATFKRNSRFLMQLCRIMDEAVGV 179
PI + LY G GS+LN +I+V + + +I+D+
Sbjct: 119 PIVERLYEGIPGKGSYLNGEKIKVRELAEKPSISFYTK---------GKGTKIIDKVKRT 169
Query: 180 RSFGSEALDLAYIAAGRFDGF--LGKGLSIWCVAAGLLIICEAGGFATDFLGKNMGAETK 237
R+ G+ AL+LAY+A G D + L +AAG++I EAG D GK++
Sbjct: 170 RTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFS 229
Query: 238 S------IISGNMPIHEQLLAIIN 255
+ I + N + E +L I
Sbjct: 230 ATEKVNIIAANNEELLETILRSIE 253
>1xi6_A Extragenic suppressor; structural genomics, southeast
collaboratory for structural genomics hyperthermophIle,
PSI; 2.80A {Pyrococcus furiosus} (A:)
Length = 262
Score = 163 bits (412), Expect = 3e-41
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 19/260 (7%)
Query: 4 SALLNVMVSAALKAGKFLSRDFGEVQDLQ-VSRKGPSDFVMKSHSKCQEIIYQELLGARP 62
V + + FG + V D +++I +
Sbjct: 12 KFWREVAIDIISDFETTIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRITELGV 71
Query: 63 KYGFYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFNPIT 122
S + +S IVDPL+G NF IP F +S+A+ + + I ++I+ P+T
Sbjct: 72 --NVVSEEVGVIDNESEYTVIVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAIIYEPMT 129
Query: 123 DELYTAERGIGSFLNDRRIRVSSRRILSNSIICYATFKRNSRFLMQLCRIMDEAVGVRSF 182
+ + G G+FLN +RI+V SI Y+ + I+ R+
Sbjct: 130 ERFFEGIPGEGAFLNGKRIKVRKTPDEKPSISFYSR--------GKGHEIVKHVKRTRTL 181
Query: 183 GSEALDLAYIAAGRFDGF--LGKGLSIWCVAAGLLIICEAGGFATDFLG------KNMGA 234
G+ AL+LAY+A G DG + K + +AAG +I EAG D G N
Sbjct: 182 GAIALELAYLAMGALDGVVDVRKYVRPTDIAAGTIIAKEAGALIKDSAGKDIDISFNATD 241
Query: 235 ETKSIISGNMPIHEQLLAII 254
I + + + +L+++
Sbjct: 242 RLDVIAVNSEELLKTILSLL 261
>2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic
proteinase mechanism, aspartyl protease, succinimide,
zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A
1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A (A:)
Length = 277
Score = 160 bits (406), Expect = 1e-40
Identities = 56/264 (21%), Positives = 114/264 (43%), Gaps = 12/264 (4%)
Query: 4 SALLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGARPK 63
++ V+ A +AG+ + + + P+D V + K ++++ + P
Sbjct: 6 QECMDYAVTLAGQAGEVVREALKNE-MNIMVKSSPADLVTATDQKVEKMLITSIKEKYPS 64
Query: 64 YGFYS----GGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFN 119
+ F WI+DP++G TNF + P +SI ++++ ++++
Sbjct: 65 HSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYS 124
Query: 120 PITDELYTAERGIGSFLNDRRIRVSSRRILSNSIICY------ATFKRNSRFLMQLCRIM 173
+ D++YT +G G+F N ++++VS + ++ S++ +
Sbjct: 125 CLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERLLC 184
Query: 174 DEAVGVRSFGSEALDLAYIAAGRFDGFLGKGLSIWCVAAGLLIICEAGGFATDFLGKNMG 233
G+R G+ AL++ +AAG D + G+ W VA +I+ EAGG D G
Sbjct: 185 LPIHGIRGVGTAALNMCLVAAGAADAYYEMGIHCWDVAGAGIIVTEAGGVLLDVTGGPFD 244
Query: 234 AETK-SIISGNMPIHEQLLAIIND 256
++ I S N + E++ I
Sbjct: 245 LMSRRVIASSNKTLAERIAKEIQI 268
>1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and
I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus
jannaschii} (A:)
Length = 252
Score = 156 bits (394), Expect = 3e-39
Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 17/258 (6%)
Query: 6 LLNVMVSAALKAGKFLSRDFGEVQDLQVS-RKGPSDFVMKSHSKCQEIIYQELLGARPKY 64
+ + A + K + FG V D ++I + L
Sbjct: 3 WDEIGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYL--KSLNV 60
Query: 65 GFYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFNPITDE 124
S + S ++DP++G NF IP F + ++ E + + +T
Sbjct: 61 NIVSEELGVIDNSSEWTVVIDPIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTYEFLTKS 120
Query: 125 LYTAERGIGSFLNDRRIRVSSRRILSNSIICYATFKRNSRFLMQLCRIMDEAVGVRSFGS 184
Y A +G G++LN R+I+V + I Y + L ++ ++ VR FG+
Sbjct: 121 FYEAYKGKGAYLNGRKIKVKDFNPNNIVISYY------PSKKIDLEKLRNKVKRVRIFGA 174
Query: 185 EALDLAYIAAGRFDGF--LGKGLSIWCVAAGLLIICEAGGFATDFLG------KNMGAET 236
L++ Y+A G D + + +A+ +I EAG TD G N
Sbjct: 175 FGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLNATDRL 234
Query: 237 KSIISGNMPIHEQLLAII 254
I++ + + + +L ++
Sbjct: 235 NIIVANSKEMLDIILDLL 252
>1inp_A Inositol polyphosphate 1-phosphatase; hydrolase(phosphoric
monoester); 2.30A {Bos taurus} (A:)
Length = 400
Score = 155 bits (391), Expect = 6e-39
Identities = 23/301 (7%), Positives = 59/301 (19%), Gaps = 45/301 (14%)
Query: 1 MSRSALLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGA 60
+ + + + V+ + E + + +
Sbjct: 69 FPGLGKKIFGEESNELTNDLGEKIIMRLGPTEEETVALLSKVLNGNKLASEALAKVVHQD 128
Query: 61 RPKYGFYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERD----------- 109
I VDP++ + + +
Sbjct: 129 VFFSDPALDSVEINIPQDILGIWVDPIDSTYQYIKGSADITPNQGIFPSGLQCVTVLIGV 188
Query: 110 -----QEIIASVIFNPITDEL----------YTAERGIGSFLNDRRIRVSSRRILSNSII 154
+ VI P + Y +G+ ++ VS+R
Sbjct: 189 YDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRSNSEAQSQ 248
Query: 155 ------------CYATFKRNSRFLMQLCRIMDEAVGVRSFGSEALDLAYIAAGRFDGFL- 201
+ + ++ + + G D ++
Sbjct: 249 GTQNPSSEGSCRFSVVISTSEKETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIF 308
Query: 202 -GKGLSIWCVAAGLLIICEAGGFATDFLGK-----NMGAETKSIISGNMPIHEQLLAIIN 255
W A I+ GG D + G + ++ +
Sbjct: 309 SEDTTFKWDSCAAHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWA 368
Query: 256 D 256
+
Sbjct: 369 N 369
>1ka1_A Halotolerance protein HAL2; nucleotidase, salt tolerance,
inositol, hydrolase; HET: A3P; 1.30A {Saccharomyces
cerevisiae} (A:)
Length = 357
Score = 152 bits (384), Expect = 4e-38
Identities = 45/297 (15%), Positives = 85/297 (28%), Gaps = 42/297 (14%)
Query: 1 MSRSALLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGA 60
+ +A+ + + + S ++ +D V + K + ++
Sbjct: 55 IIINAIKSNFPDDKVVGEESSSGLSDAFVSGILNEIKANDEVYNKNYKKDDFLFTNDQFP 114
Query: 61 RPKYGFYS---GGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVI 117
Y G W +DP++G F F + +AL D + I
Sbjct: 115 LKSLEDVRQIIDFGNYEGGRKGRFWCLDPIDGTKGFLRGE-QFAVCLALIVDGVVQLGCI 173
Query: 118 FNPITDELYTAERGI----------------GSFLNDRRIR-------VSSRRILSNSII 154
P + + G+F + V + + I
Sbjct: 174 GCPNLVLSSYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMIT 233
Query: 155 CYATFKRNSRFLMQLCRIMDEAVGVRSFGSEALDLAYIAAGRFDGFL------GKGLSIW 208
K +S Q + +A G D +L IW
Sbjct: 234 LEGVEKGHSSHDEQTAIKNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKLSYQEKIW 293
Query: 209 CVAAGLLIICEAGGFATDFLG---------KNMGAETKSIISGNMPIHEQLLAIIND 256
AAG +I+ EAGG TD + + + + SG +H+ +++ D
Sbjct: 294 DHAAGNVIVHEAGGIHTDAMEDVPLDFGNGRTLATKGVIASSGPRELHDLVVSTSCD 350
>1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol
monophosphatase; dual activity, archaeal phosphatase,
APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus}
(A:)
Length = 252
Score = 151 bits (382), Expect = 7e-38
Identities = 58/267 (21%), Positives = 96/267 (35%), Gaps = 27/267 (10%)
Query: 1 MSRSALLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGA 60
M L + A + K ++ + V + ++ + L
Sbjct: 1 MDERDALRISREIAGEVRKAIASMPLRERVKDVGMGKDGTPTKAADRVAEDAALEILRKE 60
Query: 61 RPKYGFYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASV--IF 118
R G V + +DPL+G N IP + +S+ ++ +
Sbjct: 61 RVTVVTEESG---VLGEGDVFVALDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGYV 117
Query: 119 NPITDELYTAERGIGSFLNDRRIRVSSRRILSNSIICYATFKRNSRFLMQLCRIMDEAVG 178
+ G++ N RI VS L + I Y
Sbjct: 118 YNLATGDEYYADSSGAYRNGERIEVSDAEELYCNAIIYY------------PDRKFPFKR 165
Query: 179 VRSFGSEALDLAYIAAGRFDGFL----GKGLSIWCVAAGLLIICEAGGFATDFLGKNM-- 232
+R FGS A +L + A G FD FL GK L I+ AAG+ I +AGG T+ G+++
Sbjct: 166 MRIFGSAATELCFFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTELDGESLGN 225
Query: 233 ----GAETKSIISGNMPIHEQLLAIIN 255
E +I++ N +H +LL +I
Sbjct: 226 KKFDMQERLNIVAANEKLHPKLLELIK 252
>3b8b_A CYSQ, sulfite synthesis pathway protein;
3'-phosphoadenosine-5'-phosphosulfate (PAPS)
3'-phosphatase, structural genomics; HET: MSE; 1.70A
{Bacteroides thetaiotaomicron vpi-5482} (A:)
Length = 292
Score = 148 bits (375), Expect = 5e-37
Identities = 49/269 (18%), Positives = 85/269 (31%), Gaps = 22/269 (8%)
Query: 1 MSRSALLNVMVSAALKAGKFLSRDFGEVQ-DLQVSRKGPSDFVMKSHSKCQEIIYQELLG 59
+ + + AALKAG+ + + + + D ++ RK + + + K E I L
Sbjct: 18 LYFQSNAXAAIDAALKAGEKILSIYEDPKSDFEIERKADNSPLTIADRKAHEAIVAILNE 77
Query: 60 ARPKYGFYS--GGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVI 117
V + T WIVDPL+G F F ++IAL ++ + VI
Sbjct: 78 TPFPVLSEEGKHXDYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVXGVI 137
Query: 118 FNPITDELYTAERGIGSFLNDRRIRVSSRRILSNSIIC------------------YATF 159
+ P+ ELY A G G++ + + + I +
Sbjct: 138 YVPVKKELYFAVEGTGAYKXSGIVGLEDEGVTLQQXIEKSERXPLADARDHFIAVASRSH 197
Query: 160 KRNSRFLMQLCRIMDEAVGVRSFGSEALDLAYIAAGRFDGFLGKG-LSIWCVAAGLLIIC 218
++ + +A G+ D + W AAG I
Sbjct: 198 LTPETETYIADLKKKHGNVELISSGSSIKICLVAEGKADVYPRFAPTXEWDTAAGHAIAR 257
Query: 219 EAGGFATDFLGKNMGAETKSIISGNMPIH 247
AG + K + I
Sbjct: 258 AAGXEVYQAGKEEPLRYNKEDLLNPWFIV 286
>1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product
complex, sugar nucleotidase fold, hydrolase; HET: AMP;
1.69A {Rattus norvegicus} (A:)
Length = 308
Score = 139 bits (351), Expect = 3e-34
Identities = 49/300 (16%), Positives = 88/300 (29%), Gaps = 44/300 (14%)
Query: 1 MSRSA-----LLNVMVSAALKAGKFLSRDFGEVQDLQVSRKGPSDFVMKSHSKCQEIIYQ 55
M+ S L+ S A KAG + E V + +D K+ Q I
Sbjct: 1 MASSHNVLMRLVASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICS 60
Query: 56 ELLGARPKYGFYS---GGKAYVGQDSITR------------------------WIVDPLN 88
L PK V Q+ I VDP++
Sbjct: 61 SLSRKFPKLTIIGEEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVD 120
Query: 89 GITNFFYA-IPHFCISIALERDQEIIASVIFNPITDELYTAERGIGSFLNDRRIRVSSRR 147
G + + + + I + + + IA +I P + + +G + +
Sbjct: 121 GTKEYTEGLLDNVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAFGF 180
Query: 148 ILSNSIICY---ATFKRNSRFLMQLCRIMDEAVGVRSFGSEALDLAYIAAGRFDG--FLG 202
L + T + +S L+ C V G + + G+ F
Sbjct: 181 QLKEAPAGKHIITTTRSHSNKLVTDCIAAMNPDNVLRVGGAGNKIIQLIEGKASAYVFAS 240
Query: 203 KGLSIWCVAAGLLIICEAGGFATDFLGKNM------GAETKSIISGNMPIHEQLLAIIND 256
G W A +I+ GG TD G + + + + +E + + +
Sbjct: 241 PGCKKWDTCAPEVILHAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAALRNYEYYASRVPE 300
>1nuw_A Fructose-1,6-bisphosphatase; allosteric enzymes,
gluconeogenesis, hydrolase; HET: F6P; 1.30A {Sus scrofa}
(A:)
Length = 337
Score = 129 bits (323), Expect = 5e-31
Identities = 42/303 (13%), Positives = 78/303 (25%), Gaps = 50/303 (16%)
Query: 4 SALLNVMVSAALKAGKFLSRDFGE-VQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGARP 62
+ LLN + +A + + + + S D V K +++ L +
Sbjct: 31 TQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVINVLKSSFA 90
Query: 63 KYGFYS-----GGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVI 117
S + DPL+G +N + I ++ S
Sbjct: 91 TCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEK 150
Query: 118 ----------------FNPITDELYTAERGIGSFLNDR----RIRVSSRRILSNSIICYA 157
+ T + G+ F+ D I V + Y+
Sbjct: 151 DALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRDVKIKKKGSIYS 210
Query: 158 TFKRNSRFLMQ----------LCRIMDEAVGVRSFGSEALDLAYIAAGRFDGFL------ 201
+ ++ G R GS D+
Sbjct: 211 INEGYAKEFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKS 270
Query: 202 --GKGLSIWCVAAGLLIICEAGGFATDFLGKNM------GAETKSIISGNMPIHEQLLAI 253
GK ++ ++ +AGG AT + + II G+ +LL I
Sbjct: 271 PKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEI 330
Query: 254 IND 256
Sbjct: 331 YQK 333
>2fhy_A Fructose-1,6-bisphosphatase 1; allosteric inhibitors human
fbpase, benzoxazole, intersubunit allosteric inhibition
of human fpbase, hydrolase; HET: A37; 2.95A {Homo
sapiens} (A:)
Length = 374
Score = 128 bits (322), Expect = 6e-31
Identities = 39/303 (12%), Positives = 78/303 (25%), Gaps = 50/303 (16%)
Query: 4 SALLNVMVSAALKAGKFLSRDF-GEVQDLQVSRKGPSDFVMKSHSKCQEIIYQELLGARP 62
+ LLN + +A + + + + S D V K +++ L +
Sbjct: 68 TQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVMNMLKSSFA 127
Query: 63 KYGFYS-----GGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVI 117
S + DPL+G +N + I + S
Sbjct: 128 TCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSVGTIFGIYRKKSTDEPSEK 187
Query: 118 ----------------FNPITDELYTAERGIGSFLNDR----RIRVSSRRILSNSIICYA 157
+ T + + G+ F+ D I V + Y+
Sbjct: 188 DALQPGRNLVAAGYALYGSATMLVLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYS 247
Query: 158 TFKRNSRFL----------MQLCRIMDEAVGVRSFGSEALDLAYIAAGRFDGFL------ 201
+ ++ + G R GS D+
Sbjct: 248 LNEGYAKDFDPAVTEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKS 307
Query: 202 --GKGLSIWCVAAGLLIICEAGGFATDFLGKNM------GAETKSIISGNMPIHEQLLAI 253
GK ++ ++ +AGG AT + + +I G+ + L +
Sbjct: 308 PNGKLRLLYECNPMAYVMEKAGGMATTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLKV 367
Query: 254 IND 256
Sbjct: 368 YEK 370
>1dcu_A Fructose-1,6-bisphosphatase; chloroplast, photosynthesis,
redox regulation, thioredoxin, allostery; 2.20A {Pisum
sativum} (A:1-228)
Length = 228
Score = 97.3 bits (241), Expect = 2e-21
Identities = 23/188 (12%), Positives = 51/188 (27%), Gaps = 11/188 (5%)
Query: 4 SALLNVMVSAALKAGKFLSRDFGEVQ-DLQVSRKGPSDFVMKSHSKCQEIIYQELLGARP 62
+ +L+ + A + + R Q + + K E+ L +
Sbjct: 39 TIVLSSISMACKQIASLVQRANISNLTGTQGAVNIQGEDQKKLDVISNEVFSNCLRSSGR 98
Query: 63 KYGFYS-----GGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVI 117
S + DPL+G +N A+ I + E +
Sbjct: 99 TGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNLDAAVSTGSIFGIYSPNDECLPDFG 158
Query: 118 FNPITDELYTAERGIGS--FLNDRRIRVSSRRILSNSIICYATFKRNS---RFLMQLCRI 172
+ + L T E+ + + + S+S+I T +
Sbjct: 159 DDSDDNTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLTIGKGVFVFTLDPLYGEF 218
Query: 173 MDEAVGVR 180
+ ++
Sbjct: 219 VLTQENLQ 226
>2gq1_A Fructose-1,6-bisphosphatase; allosteric activator site,
quaternary conformation, hydrolase; 1.45A {Escherichia
coli} PDB: 2owz_A* 2ox3_A* 2q8m_A* 2qvr_A* (A:1-197)
Length = 197
Score = 89.5 bits (221), Expect = 3e-19
Identities = 16/147 (10%), Positives = 41/147 (27%), Gaps = 7/147 (4%)
Query: 4 SALLNVMVSAALKAGKFLSRDFGEVQ-DLQVSRKGPSDFVMKSHSKCQEIIYQELLGARP 62
+ALL+ + A + +++ + + K E + L
Sbjct: 23 TALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDI 82
Query: 63 KYGFYS-----GGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVI 117
G S + + + DPL+G +N + ++ R + + +
Sbjct: 83 VAGIASEEEDEIVVFEGCEHAKYVVLXDPLDGSSNIDVNVS-VGTIFSIYRRVTPVGTPV 141
Query: 118 FNPITDELYTAERGIGSFLNDRRIRVS 144
+ + G + +
Sbjct: 142 TEEDFLQPGNKQVAAGYVVYGSSTXLV 168
>2vcl_A Cyanobacterial phycoerythrobilin; cyanophages, biliverdin
IXA, oxidoreductase, phycobilin reductase, phycobilin
synthesis; 1.55A {Prochlorococcus phage p-ssm2} PDB:
2vck_A 2vgr_A* (A:37-164)
Length = 128
Score = 29.7 bits (67), Expect = 0.35
Identities = 7/47 (14%), Positives = 16/47 (34%)
Query: 95 YAIPHFCISIALERDQEIIASVIFNPITDELYTAERGIGSFLNDRRI 141
+P F + D+++I F ++ + G+ R
Sbjct: 61 ADLPCFGXDLXKFSDKKVIIVFDFQHPREKYLFSVDGLPEDDGKYRF 107
>1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8
barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus}
(A:241-405)
Length = 165
Score = 26.8 bits (59), Expect = 3.0
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 13/52 (25%)
Query: 205 LSIWCVAAGLLIICEAGGFATDFLGKNMGAETKSIISGNMPIHEQLLAIIND 256
+++W + A L++ +TD + + K I+ + ++ I D
Sbjct: 14 MALWTIMAAPLLM------STDL--RTISPSAKKILQ-----NRLMIQINQD 52
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel,
greek KEY motif, beta-jellyroll, beta- trefoil,
hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces
avermitilis} PDB: 3a22_A* 3a23_A* (A:244-389)
Length = 146
Score = 26.4 bits (58), Expect = 3.5
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 13/52 (25%)
Query: 205 LSIWCVAAGLLIICEAGGFATDFLGKNMGAETKSIISGNMPIHEQLLAIIND 256
+++W ++ L+ D M +ET I+ + +++A+ D
Sbjct: 13 MNLWAISGAPLLA------GNDL--TTMTSETAGILK-----NPEVIAVDQD 51
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains,
glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A
{Hypocrea jecorina} (A:263-417)
Length = 155
Score = 26.4 bits (58), Expect = 3.5
Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 13/52 (25%)
Query: 205 LSIWCVAAGLLIICEAGGFATDFLGKNMGAETKSIISGNMPIHEQLLAIIND 256
++W L+I TD + +++ ++ LLA D
Sbjct: 13 FALWAAMKSPLLI------GTDL--AQLSQNNINLLK-----NKHLLAFNQD 51
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with
alpha helices, merohedral/ hemihedral twinning; 1.70A
{Canavalia ensiformis} (A:)
Length = 178
Score = 25.9 bits (56), Expect = 5.0
Identities = 2/61 (3%), Positives = 15/61 (24%)
Query: 59 GARPKYGFYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIF 118
+ ++ + + + ++ A + + + + I +
Sbjct: 107 DNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDEIEQTLL 166
Query: 119 N 119
Sbjct: 167 Q 167
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase
C; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB:
3f2c_A* 3f2d_A* (A:406-496,A:551-689)
Length = 230
Score = 25.8 bits (57), Expect = 6.8
Identities = 5/23 (21%), Positives = 8/23 (34%)
Query: 135 FLNDRRIRVSSRRILSNSIICYA 157
D V SR + +S +
Sbjct: 63 KSLDDGYLVGSRGSVGSSFVATM 85
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation,
hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis
vinacea} (A:246-397)
Length = 152
Score = 25.6 bits (56), Expect = 7.1
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 13/49 (26%)
Query: 205 LSIWCVAAGLLIICEAGGFATDFLGKNMGAETKSIISGNMPIHEQLLAI 253
+IW LI+ D N+ TK II +++++A+
Sbjct: 13 YTIWAALKSPLIL------GNDV--TNITNTTKEIIM-----NKEVIAV 48
>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase;
nucleotide metabolism, trimer, hydrolase; HET: DUT;
1.80A {Escherichia coli} (A:)
Length = 193
Score = 25.3 bits (55), Expect = 7.6
Identities = 9/60 (15%), Positives = 16/60 (26%), Gaps = 4/60 (6%)
Query: 79 ITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFNPI---TDELYTAERGIGSF 135
+T +DP + +AL I ++ F P+ Y
Sbjct: 122 VTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLI-GALSFEPLSGPAVRPYNRREDAKYR 180
Database: mmdb70
Posted date: Jun 20, 2010 3:12 AM
Number of letters in database: 4,956,049
Number of sequences in database: 33,805
Lambda K H
0.325 0.140 0.414
Gapped
Lambda K H
0.267 0.0715 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 1,904,948
Number of extensions: 84470
Number of successful extensions: 313
Number of sequences better than 10.0: 1
Number of HSP's gapped: 263
Number of HSP's successfully gapped: 29
Length of query: 256
Length of database: 4,956,049
Length adjustment: 87
Effective length of query: 169
Effective length of database: 2,015,014
Effective search space: 340537366
Effective search space used: 340537366
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (24.2 bits)