HHsearch results for GI: 254780157 and protein with PDBid: 3okf_A
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=95.01 E-value=0.17 Score=29.67 Aligned_cols=88 Identities=16% Similarity=0.171 Sum_probs=69.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE---HHCCHHHHHHHHHHHHHCCCE---EEEEEE-CCCCCCHHH
Q ss_conf 8749999588169899999999999809982654530---103879999889876535982---999972-676685113
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIIS---AHRTPDRLIEFAKNARFEGFK---LIIAGA-GGAAHLPGM 76 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~S---AHR~p~~l~~~~~~~~~~~~~---viIa~A-G~aaaLpgv 76 (165)
..|+.||.+..-..-+.++....|+..+++....+.. ..++.+.+.++.+.....+.+ ++|++- |...-+.|.
T Consensus 62 ~~r~~vI~D~~v~~l~~~~l~~~L~~~~~~v~~~~~~~gE~~Ks~~~~~~i~~~l~~~~~~r~~~viaiGGG~v~Dlagf 141 (390)
T 3okf_A 62 KQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGF 141 (390)
T ss_dssp TCEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
T ss_conf 99899998983679999999999986699469999689954289999999999987622687713797179720318899
Q ss_pred HHH--HCCCCEEEECCC
Q ss_conf 465--224203661257
Q gi|254780157|r 77 IAA--MTSLPVLGVPII 91 (165)
Q Consensus 77 va~--~t~~PVIgVP~~ 91 (165)
+|+ +--.|.|-+|+.
T Consensus 142 vAs~y~RGi~~i~iPTT 158 (390)
T 3okf_A 142 AAACYQRGVDFIQIPTT 158 (390)
T ss_dssp HHHHBTTCCEEEEEECS
T ss_pred HHHHHHCCCCEEECCCH
T ss_conf 99998289755640435