HHSEARCH alignment of GI: 254780157 and SCOP domain: d2bona1

Alignment
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=96.14  E-value=0.013  Score=35.38  Aligned_cols=83  Identities=20%  Similarity=0.374  Sum_probs=58.9

Q ss_pred             CEEEEEE-CCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHC--
Q ss_conf             7499995-8816989999999999980998265453010387999988987653598299997267668511346522--
Q gi|254780157|r    5 PPVAIIM-GSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMT--   81 (165)
Q Consensus         5 pkV~Ii~-GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t--   81 (165)
                      |+..+|. +...+-...+++...|++.|++++++...-   +.+..++++++..+++++ |+++|+.+.+.-|+.++.  
T Consensus         1 p~~l~i~N~~s~~~~~~~~~~~~l~~~g~~~~v~~T~~---~g~a~~~~~~~~~~~~d~-Ivv~GGDGTv~ev~~gl~~~   76 (295)
T d2bona1           1 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWE---KGDAARYVEEARKFGVAT-VIAGGGDGTINEVSTALIQC   76 (295)
T ss_dssp             CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCS---TTHHHHHHHHHHHHTCSE-EEEEESHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCC---CCHHHHHHHHHHHCCCCE-EEEECCCCHHHHHHHHHHHC
T ss_conf             94999987887786579999999997899799998188---345999999998669978-99977982798999878750


Q ss_pred             ---CCCEEEECCC
Q ss_conf             ---4203661257
Q gi|254780157|r   82 ---SLPVLGVPII   91 (165)
Q Consensus        82 ---~~PVIgVP~~   91 (165)
                         ..|.||+=|.
T Consensus        77 ~~~~~p~lgilP~   89 (295)
T d2bona1          77 EGDDIPALGILPL   89 (295)
T ss_dssp             CSSCCCEEEEEEC
T ss_pred             CCCCCCEEEEEEC
T ss_conf             6788965999977


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Lipid kinase YegS
species: Escherichia coli [TaxId: 562]