HHSEARCH alignment of GI: 254780157 and SCOP domain: d2pjua1

Alignment

Probab=91.84  E-value=0.46  Score=25.40  Aligned_cols=132  Identities=14%  Similarity=0.175  Sum_probs=77.0

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHH-HHHHHCCCEEEEEEECCCCCCHHHHHHHCC
Q ss_conf             8749999588169899999999999809982654530103879999889-876535982999972676685113465224
Q gi|254780157|r    4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFA-KNARFEGFKLIIAGAGGAAHLPGMIAAMTS   82 (165)
Q Consensus         4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~-~~~~~~~~~viIa~AG~aaaLpgvva~~t~   82 (165)
                      +|.+.-+.=|.    ..+-..++..+|.=..++.+...  +.+...+.+ +..+.++++|||+--|.+    ..+-.+++
T Consensus         1 ~p~i~~~~~sr----L~~l~~~i~~ey~~~~~i~v~~~--~~e~av~~~~~~~~~~~~DviISRG~ta----~~ir~~~~   70 (186)
T d2pjua1           1 KPVIWTVSVTR----LFELFRDISLEFDHLANITPIQL--GFEKAVTYIRKKLANERCDAIIAAGSNG----AYLKSRLS   70 (186)
T ss_dssp             CCEEEEECCHH----HHHHHHHHHTTTTTTCEEEEECC--CHHHHHHHHHHHTTTSCCSEEEEEHHHH----HHHHTTCS
T ss_pred             CCEEEEEEHHH----HHHHHHHHHHHHCCCCEEEEECC--CHHHHHHHHHHHHHCCCCCEEEECCHHH----HHHHHHCC
T ss_conf             98899988899----99999999997258862996507--4788999999998708998999796389----99998689


Q ss_pred             CCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC--------CCHHHHHHHHHHHHH
Q ss_conf             203661257766675001699840356986204431675312289999999706--------999999999999999
Q gi|254780157|r   83 LPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL--------DDKELTDRLNEWRTQ  151 (165)
Q Consensus        83 ~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~--------~d~~i~~kl~~~r~~  151 (165)
                      .|||-+++++  ++=+.+|.-.-+.  +-.++.+  |-.+-....-.-.++|++        +.++++..+++.+++
T Consensus        71 iPVV~I~vs~--~Dil~al~~a~~~--~~kiavV--~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~v~~l~~~  141 (186)
T d2pjua1          71 VPVILIKPSG--YDVLQFLAKAGKL--TSSIGVV--TYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKAN  141 (186)
T ss_dssp             SCEEEECCCH--HHHHHHHHHTTCT--TSCEEEE--EESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHT
T ss_pred             CCEEEECCCH--HHHHHHHHHHHHH--CCCEEEE--ECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             9879970887--6899999999975--8978999--17762569999999959964899963889999999999987

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: PrpR receptor domain-like
family: PrpR receptor domain-like
domain: Propionate catabolism operon regulatory protein PrpR
species: Escherichia coli [TaxId: 562]