HHsearch alignment for GI: 254780158 and conserved domain: COG0045
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=98.64 E-value=6.9e-07 Score=66.24 Aligned_cols=202 Identities=19% Similarity=0.211 Sum_probs=121.8
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC-CEEEEECCCC-CCCCC--CCCCCCCHHHHHHHHHHCCC------
Q ss_conf 27888887650588674321000688886410013-1255402346-75556--64544674677898751355------
Q gi|254780158|r 102 RLYEKKFFQESGLTTVDFYEINSQESLTNILGGFK-GKGILKTRRL-GYDGK--GQKVYHENDCTQNLYASLGN------ 171 (354)
Q Consensus 102 K~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g-~P~vlKp~~~-GydGk--G~~~i~~~~~l~~~~~~~~~------ 171 (354)
T Consensus 5 EYqaKelf~~~GiPvp~g~v~~s~eea~~~a~~lg~~~~VvKaQV~aGGRGKaGGVk~~~s~~ea~~~a~~~lg~~~q~~ 84 (387)
T COG0045 5 EYQAKELFAKYGIPVPPGYVATSPEEAEEAAKELGGGPVVVKAQVHAGGRGKAGGVKLAKSPEEAKEAAEEILGKNYQTD 84 (387)
T ss_pred HHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCC
T ss_conf 88899899972998999545408999999999818996799922530576666766883898999999999848665457
Q ss_pred ------CCEEHHHCCCCC-CCC--CCEECCCCCCCEEEEECC------CC---CCCCCCEEEEEECCC-CCHHHHHHHHH
Q ss_conf ------501011114564-433--201014665413997053------34---543555058985278-78789999999
Q gi|254780158|r 172 ------VPLILERFTDFN-CEI--SIIAARSLNGSICFYDPI------QN---THVNGILHKSIVPAS-ISQKTSLLAHS 232 (354)
Q Consensus 172 ------~~~iiEe~I~~~-~Ei--sviv~r~~~G~~~~~p~~------en---~~~~gil~~s~~Pa~-i~~~~~~~a~~ 232 (354)
T Consensus 85 ~~G~~v~~vlvee~~~~~~~E~Ylsiv~DR~~~-~p~~~~S~eGGmDIEeVa~~~PekI~~~~idp~~g~~~~~aR---- 159 (387)
T COG0045 85 IKGEPVNKVLVEEAVDIIKKEYYLSIVLDRSSR-RPVLMASTEGGMDIEEVAEKTPEKIVKVSVDPLTGLRPYQAR---- 159 (387)
T ss_pred CCCCEEEEEEEEECCCCCCCEEEEEEEEECCCC-CEEEEEECCCCCCHHHHHHHCHHHEEEEEECCCCCCCHHHHH----
T ss_conf 688454289997467776433799999973778-379999667795189950028345268974776687877999----
Q ss_pred HHHHHHHHCCCCCC--------C--CCEEEECCCCEEEEEEECCCCCCC-E-E-------EEHH------------HCCC
Q ss_conf 98867754024677--------5--310455388408999412570456-0-4-------6210------------0135
Q gi|254780158|r 233 AMRKVLETLDYVGI--------L--CIEFFVTNDGNVIANEMAPRVHNS-G-H-------WTEA------------SCVI 281 (354)
Q Consensus 233 ~a~~i~~~L~~~Gv--------~--~VEffv~~dg~i~vnEiaPR~Hns-g-h-------~t~~------------~~~~ 281 (354)
T Consensus 160 ---~la~~lgl~~~~~~~~~~ii~~ly~~f~~~Da~lv--EINPLvvt~~~g~v~aLDaKi~~DdnAlfRHp~~~~~~d~ 234 (387)
T COG0045 160 ---ELAFKLGLEGELVKQVADIIKKLYKLFVEKDATLV--EINPLVVTPDGGDVLALDAKITLDDNALFRHPDLAELRDE 234 (387)
T ss_pred ---HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE--EEECCEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHCC
T ss_conf ---99997499878999999999999999997587678--7525088179980899764540367643468344555323
Q ss_pred CHHHHHHHHHHCCCCCCCHHCCC-EEEEEEECC
Q ss_conf 88999999981889997000485-679997557
Q gi|254780158|r 282 SQFEQHIRSITNLPLGNPNRHSN-CVMYNIIGS 313 (354)
Q Consensus 282 sqfe~h~rai~glpl~~~~~~~~-~~m~nilg~ 313 (354)
T Consensus 235 ~~ed~~e~~a~~~~l~yV~LdG~IG~ivNGAGL 267 (387)
T COG0045 235 SEEDPREAEASGYGLNYVELDGNIGCIVNGAGL 267 (387)
T ss_pred CCCCHHHHHHHHCCCCEEEECCCEEEEECCHHH
T ss_conf 335855787612787518863837899627269