HHsearch alignment for GI: 254780158 and conserved domain: PRK05335

>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed.
Probab=93.06  E-value=0.36  Score=27.79  Aligned_cols=42  Identities=21%  Similarity=0.320  Sum_probs=32.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCCCHHH
Q ss_conf             9887899980989899999999887978999967--67771342
Q gi|254780158|r    1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDP--DSNCPANQ   42 (354)
Q Consensus         1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~--~~~~pa~~   42 (354)
T Consensus         1 ~m~~~ViVIGgGhAG~EAA~a~Ar~G~~v~L~emrp~~~tpah~   44 (434)
T PRK05335          1 MMMKPVNVIGAGLAGSEAAWQLAKRGVPVELYEMRPVKKTPAHH   44 (434)
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf             99885699898689999999999689967999933566777624