HHsearch alignment for GI: 254780158 and conserved domain: PRK10446
>PRK10446 ribosomal protein S6 modification protein; Provisional.
Probab=99.86 E-value=6.7e-20 Score=153.86 Aligned_cols=241 Identities=16% Similarity=0.202 Sum_probs=169.5
Q ss_pred EEEEECC-CHH--HHHHHHHHHHCCCEEEEEECCCCCCHHH--CCCEEEECCCCCHHHHHHHHHHCCEEEECC----CCC
Q ss_conf 8999809-898--9999999988797899996767771342--268279878999999999974199999877----222
Q gi|254780158|r 5 TIGIIGG-GQL--ARMLSMSAARLGFCTVILDPDSNCPANQ--VSNQQIAARHDDIKALNTFADICDYATYES----ENI 75 (354)
Q Consensus 5 ~IgIlG~-GqL--~rml~~aA~~lG~~v~v~d~~~~~pa~~--~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~----E~i 75 (354)
T Consensus 2 ki~iLs~~~~~yst~RL~eaa~~rGh~v~vidp~~~~~~i~~~~~~v~~~g-----~~----L~~~DavipR~g~~~t~~ 72 (300)
T PRK10446 2 KIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKG-----RK----LPHFDAVIPRIGTAITFY 72 (300)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEHHHCEEEECCCCCEEEECC-----EE----CCCCCEEEECCCCCCCHH
T ss_conf 799993699760799999999987995999614891898248986499898-----08----687888998267774558
Q ss_pred CHHHHHHHHH-CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCCCCCCC
Q ss_conf 1133344430-20034876778763152788888765058867432100068888641001-312554023467555664
Q gi|254780158|r 76 PEKSISYLST-LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGF-KGKGILKTRRLGYDGKGQ 153 (354)
Q Consensus 76 ~~~~l~~l~~-~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~-g~P~vlKp~~~GydGkG~ 153 (354)
T Consensus 73 ~~~vLr~lE~~Gv~viN~~~aI~~~~DKl~t~qlL~~~gip~P~T~~~~~~~~~~~~i~~~gg~PvViKpl~-Gs~G~GV 151 (300)
T PRK10446 73 GTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVE-GTQGIGV 151 (300)
T ss_pred HHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECC-CCCCCCE
T ss_conf 999999999889918648999998576999999998759799988983699999999998089978999678-9886036
Q ss_pred CCCCCHHHHHHHHHHC--CCCCEEHHHCCC--CCCCCCCEECCCCCCCEEE----EEC----CCCCCCCCCEEEEEECCC
Q ss_conf 5446746778987513--555010111145--6443320101466541399----705----334543555058985278
Q gi|254780158|r 154 KVYHENDCTQNLYASL--GNVPLILERFTD--FNCEISIIAARSLNGSICF----YDP----IQNTHVNGILHKSIVPAS 221 (354)
Q Consensus 154 ~~i~~~~~l~~~~~~~--~~~~~iiEe~I~--~~~Eisviv~r~~~G~~~~----~p~----~en~~~~gil~~s~~Pa~ 221 (354)
T Consensus 152 ~l~e~~~~~~~i~~~~~~~~~~~~iQeyI~~~~g~D~Rv~vv---gg~vvaam~R~~~~g~~rtN~~~Gg~----~~~~~ 224 (300)
T PRK10446 152 VLAETRQAAESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVV---GDEVVAAIERRAKEGDFRSNLHRGGA----ASVAS 224 (300)
T ss_pred EEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEE---CCEEHHHEEEECCCCCEEEEEECCCE----EEECC
T ss_conf 997378999999998862287377522025557986799999---98624438997378834777703977----65328
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCC
Q ss_conf 78789999999988677540246775310455388408999412570
Q gi|254780158|r 222 ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRV 268 (354)
Q Consensus 222 i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~ 268 (354)
T Consensus 225 l~~e~~----~la~~a~~~lgl-~~~GVDii~~~~g~-~v~EVN~~P 265 (300)
T PRK10446 225 ITPQER----EIAIKAARTMAL-DVAGVDILRANRGP-LVMEVNASP 265 (300)
T ss_pred CCHHHH----HHHHHHHHHHCC-CEEEEEEEEECCCC-EEEEECCCH
T ss_conf 999999----999999998699-68999998828998-899993874