HHsearch alignment for GI: 254780158 and conserved domain: pfam06849

>pfam06849 DUF1246 Protein of unknown function (DUF1246). This family represents the N-terminus of a number of hypothetical archaeal proteins of unknown function.

Probab=96.93  E-value=0.01  Score=38.22  Aligned_cols=112  Identities=14%  Similarity=0.165  Sum_probs=74.2

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC-CH--HHCCCEEEECC-CCCH--HHH-HHHHHHCCEEE-ECCCCCCH
Q ss_conf             999809898999999998879789999676777-13--42268279878-9999--999-99974199999-87722211
Q gi|254780158|r    6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNC-PA--NQVSNQQIAAR-HDDI--KAL-NTFADICDYAT-YESENIPE   77 (354)
Q Consensus         6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~-pa--~~~ad~~~~~~-~~D~--~~l-~~~~~~~Dvit-~E~E~i~~   77 (354)
T Consensus         1 I~tl~SH-SALqIl~GAK~EGF~Tv~vc~~gr~~~Y~~f~~~De~iv~d~f~di~~~~~q~~L~~-~N~I~IPhgSfv~Y   78 (124)
T pfam06849         1 IATLGSH-SALQILDGAKDEGFRTVAVCQKGREKFYRRFPFVDEFIVVDKFKDILDEEVQQKLRE-NNAIFIPHGSFVAY   78 (124)
T ss_pred             CCCCCCC-HHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH-CCEEEECCCCEEEE
T ss_conf             9312130-398997238873995789981797521332686737999565899872999999998-89799748884676


Q ss_pred             HHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCC
Q ss_conf             33344430--2003487677876315278888876505886743
Q gi|254780158|r   78 KSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDF  119 (354)
Q Consensus        78 ~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~  119 (354)
T Consensus        79 ~G~~~ie~~~~VP~FGNR~lLrwEseR~~~~~lLe~Agi~~Pk~  122 (124)
T pfam06849        79 VGYDRVENEFKVPIFGNRNLLRWESERDKERKLLEKAGIRYPKK  122 (124)
T ss_pred             ECHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             55899860278870047888887653677999999769999835