HHsearch alignment of GI: 254780160 and MMDB domain: 3kcp_A_155-252

>3kcp_A (A:155-252) Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 2b59_B
Probab=95.70  E-value=0.073  Score=29.66  Aligned_cols=70  Identities=10%  Similarity=-0.034  Sum_probs=46.9

Q ss_pred             EEEEEEEECCCCCCC-------CCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCE--EEEEEEE-CCCCCEEEEE
Q ss_conf             279999986887753-------46759999953888762058898246856630226721--8999961-5777527899
Q gi|254780160|r   38 RITCEARLTENSTSI-------DSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGD--YLISASF-GHVGVVKKIT  107 (298)
Q Consensus        38 ~i~l~a~~~~~~~~~-------~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~--Y~v~~s~-g~~~~~~~vt  107 (298)
                      ...++.+..+.....       +.|+.-.+  .. ...   ..+||.+|.+....+|+|.  |.|..+| ||......+.
T Consensus         3 ~~~i~G~V~d~~~~~~~~~~~~L~~a~v~~--~~-~~~---gt~TD~~G~F~l~~~~~g~~~y~l~iS~iGy~~~~~~v~   76 (98)
T 3kcp_A            3 GYKVSGYILPDFSFDATVAPLVKAGFKVEI--VG-TEL---YAVTDANGYFEITGVPANASGYTLKISRATYLDRVIANV   76 (98)
T ss_dssp             SEEEEEEEEESSCCCTTTHHHHHSCCEEEE--TT-SSC---EEECCTTSEEEEEEECCEEEEEEEEEECTEECCEEEEEE
T ss_pred             CEEEEEEECCCCEECCCCCCCCCCEEEEEC--CC-CEE---EEEECCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCC
T ss_conf             338887871551012555424541279732--57-516---999646625884035888447899970687257873031


Q ss_pred             EECCCC
Q ss_conf             806861
Q gi|254780160|r  108 VSSKEK  113 (298)
Q Consensus       108 V~~~~~  113 (298)
                      ...+..
T Consensus        77 ~~~~~~   82 (98)
T 3kcp_A           77 VVTGDT   82 (98)
T ss_dssp             EESSCE
T ss_pred             CCCCCC
T ss_conf             000101