HHsearch results for GI: 254780160 and protein with PDBid: 1d2o_A
>1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1
Probab=90.10 E-value=0.72 Score=22.25 Aligned_cols=129 Identities=12% Similarity=0.130 Sum_probs=60.9
Q ss_pred CCEEEEEEECCCCCCCEEEEEEECCCC-EEEECCCC---C---EEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEE
Q ss_conf 675999995388876205889824685-66302267---2---1899996157775278998068613678751366437
Q gi|254780160|r 54 SGVSWHIFDSISNKKNTLSTTKKIIGG-KVSFDLFP---G---DYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGI 126 (298)
Q Consensus 54 ~G~~~~vy~~~~~~~g~~~~tt~~~G~-~~~~~L~p---G---~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~~~ag~~ 126 (298)
+-+.++||.. ....+... ++.+++- ..+.+||- | .|.|.+...+ ++...+. + .............+
T Consensus 23 ~si~v~L~~n-g~~~~~~~-~~~~~~w~~tf~~Lpk~d~G~~i~Y~V~E~~v~-gY~~~v~---g-~~itnt~~~~~~~i 95 (187)
T 1d2o_A 23 EKVSVNLLAN-GEKVKTLD-VTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVK-DYTTDIN---G-TTITNKYTPGETSA 95 (187)
T ss_dssp SEEEEEEEET-TEEEEEEE-EEGGGTTEEEEEEEESEETTEECCEEEEECCCT-TEEEEEE---T-TEEEEEECTTEEEE
T ss_pred CEEEEEEEEC-CEECCEEE-ECCCCCCEEEECCCCCCCCCCEEEEEEEEECCC-CCEEEEC---C-EEEEECCCCCCEEE
T ss_conf 7699999879-91922088-547898489985650137998699999971469-8262303---3-58982123210004
Q ss_pred EEEEEECCCC---CCCCCEEEEEEECCCCCEEEE-EEECCC--CCEEEEECCC------CEEEEEEECCCCCEEE
Q ss_conf 9998615788---777551899998389743566-750567--5135210676------1799996157785445
Q gi|254780160|r 127 RLYSIYKPGS---PIVDDELTFSIYSNPNHKALL-ITDKVR--SGTLVRLGTN------NYQITSHYGKYNAIVS 189 (298)
Q Consensus 127 ~~~~~~~~~~---~~~~~~~~f~i~~~~~~~~~~-~t~~~~--~~~~~~L~~G------~Y~v~et~a~~~~~~~ 189 (298)
.+.++-.++. ...+..++|.||.++...... .....+ ...+.+||.. .|+|+|...|.||..+
T Consensus 96 ~v~K~W~d~~~~~~~rP~~i~v~L~~~g~~~~~~~~l~~~~~W~~~f~~Lp~~~~G~~i~Y~V~E~~~~~GY~~~ 170 (187)
T 1d2o_A 96 TVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTH 170 (187)
T ss_dssp EEEEEEESSTTSSSCCCSCEEEEEEETTEEEEEEEEESGGGTTEEEEEEEESEETTEECCEEEEECSCCTTEEEE
T ss_pred EEEEECCCCCCCCCCCCCCEEEEEEECCEEECEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEE
T ss_conf 667523589876676887489999989877020899717896799977876347997899999994679995999