Query         gi|254780160|ref|YP_003064573.1| hypothetical protein CLIBASIA_00215 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 298
No_of_seqs    193 out of 319
Neff          8.3 
Searched_HMMs 23785
Date          Sun May 22 21:34:03 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780160.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3kpt_A Collagen adhesion prote  99.8 1.8E-16 7.7E-21  123.1  20.0  248   38-288     9-353 (355)
  2 2pz4_A Protein GBS052; SPAB, G  99.6 9.5E-15   4E-19  112.0  15.0  162   46-207    25-229 (239)
  3 2pz4_A Protein GBS052; SPAB, G  99.6 1.3E-14 5.3E-19  111.2  12.3  155  137-293    29-234 (239)
  4 3hr6_A SPAA, putative surface-  99.1 3.2E-08 1.4E-12   69.8  19.8   84  209-292   307-435 (436)
  5 2ww8_A RRGA, cell WALL surface  99.0 1.5E-09 6.5E-14   78.3   8.5   81  207-287   734-837 (893)
  6 2ww8_A RRGA, cell WALL surface  99.0 5.4E-08 2.3E-12   68.3  16.1   75   40-115    49-128 (893)
  7 2x9x_A RRGB, cell WALL surface  98.9   2E-10 8.6E-15   84.0   1.7  146  136-282   175-421 (444)
  8 2x5p_A FBA2, fibronectin bindi  98.9 1.4E-08   6E-13   72.1  10.6   93  122-217    26-120 (121)
  9 2x5p_A FBA2, fibronectin bindi  98.8 3.5E-08 1.5E-12   69.6   9.9   87  193-280    11-102 (121)
 10 2xi9_A Ancillary protein 1; ce  98.8 3.4E-08 1.4E-12   69.6   8.8   77   35-113    23-103 (457)
 11 2xi9_A Ancillary protein 1; ce  98.7 3.7E-08 1.5E-12   69.4   7.6   81  122-202    23-106 (457)
 12 1d2p_A Collagen adhesin, CNA;   98.7 8.4E-06 3.5E-10   54.2  19.3  213   51-272   110-359 (373)
 13 1d2p_A Collagen adhesin, CNA;   98.5 6.4E-05 2.7E-09   48.4  22.7  203   53-263    22-259 (373)
 14 1h8l_A Carboxypeptidase GP180   98.5 4.4E-07 1.8E-11   62.5   7.6   79  208-287   300-379 (380)
 15 3kpt_A Collagen adhesion prote  98.4 1.2E-06 4.9E-11   59.7   7.6   85  122-207   249-353 (355)
 16 2nsm_A Carboxypeptidase N cata  98.2 3.7E-06 1.6E-10   56.4   6.7   78  209-288   321-399 (439)
 17 2x9x_A RRGB, cell WALL surface  97.9 1.1E-07 4.7E-12   66.3  -6.0  145   52-198   178-416 (444)
 18 1cwv_A Invasin; integrin-bindi  97.8  0.0018 7.4E-08   39.1  15.7  226   38-266    27-288 (492)
 19 2x9z_A RRGB, cell WALL surface  97.7 0.00015 6.2E-09   46.1   7.8   54  218-271   170-229 (262)
 20 3hr6_A SPAA, putative surface-  97.6 0.00012 5.2E-09   46.6   6.5   57   47-103    28-111 (436)
 21 2nsm_A Carboxypeptidase N cata  97.5 0.00042 1.8E-08   43.1   8.5   89  122-217   319-407 (439)
 22 3irp_X URO-adherence factor A;  97.5 0.00085 3.6E-08   41.2   9.1   49  219-268   324-376 (429)
 23 2x9z_A RRGB, cell WALL surface  97.4 0.00049 2.1E-08   42.7   7.0   61  130-190   166-229 (262)
 24 1h8l_A Carboxypeptidase GP180   97.2  0.0017 6.9E-08   39.3   8.4   79  124-207   300-378 (380)
 25 3irp_X URO-adherence factor A;  97.2 0.00049 2.1E-08   42.7   5.5   55  135-190   324-379 (429)
 26 3mn8_A LP15968P; catalytic dom  97.1  0.0015 6.2E-08   39.6   7.3   77  211-288   338-419 (435)
 27 1uwy_A Carboxypeptidase M; met  97.0  0.0019 8.1E-08   38.9   7.1   65  211-276   297-364 (426)
 28 1nkg_A Rhamnogalacturonase B;   96.4   0.024   1E-06   31.8   8.8   75  208-285   257-334 (508)
 29 1uwy_A Carboxypeptidase M; met  96.1   0.019 8.2E-07   32.4   7.3   80  123-207   295-378 (426)
 30 3e8v_A Possible transglutamina  94.9    0.16 6.6E-06   26.5   9.4   65  218-286     9-81  (82)
 31 1xpn_A Hypothetical protein PA  94.8   0.054 2.3E-06   29.5   5.7   45  238-282   111-167 (170)
 32 1xpn_A Hypothetical protein PA  93.2    0.22 9.4E-06   25.5   6.4   50  155-204   109-168 (170)
 33 1d2o_A Collagen adhesin, CNA;   90.1    0.72   3E-05   22.2  19.4  129   54-189    23-170 (187)
 34 1ti6_B Pyrogallol hydroxytrans  88.8    0.89 3.7E-05   21.6   7.5   63  221-284   207-272 (274)
 35 2bum_B Protocatechuate 3,4-dio  87.1     1.1 4.7E-05   21.0   7.0   59   35-93     75-150 (241)
 36 3pcg_M Protocatechuate 3,4-dio  84.0     1.6 6.7E-05   20.0   6.5   59   35-93     74-149 (238)
 37 2pn5_A TEP1R, thioester-contai  83.8     1.6 6.8E-05   20.0  25.7  224   36-262   114-381 (1325)
 38 1s9a_A Pyrocatechase, chloroca  83.5     1.7   7E-05   19.9   6.5   59   35-93    100-171 (257)
 39 1tmx_A Hydroxyquinol 1,2-dioxy  80.9     2.1 8.7E-05   19.3   6.4   59   35-93    130-199 (293)
 40 3pcg_A Protocatechuate 3,4-dio  80.6     2.1 8.9E-05   19.2   5.7   58   35-92     45-115 (200)
 41 1wlh_A Gelation factor; ABP-12  80.2     2.2 9.2E-05   19.1  13.7  199   76-278    62-294 (311)
 42 3hhy_A 1,2-CTD, catechol 1,2-d  80.1     2.2 9.3E-05   19.1   6.7   58   36-93    129-198 (280)
 43 3n9t_A PNPC; phospholipid bind  79.6     2.3 9.6E-05   19.0   6.4   59   35-93    126-196 (290)
 44 2azq_A Catechol 1,2-dioxygenas  79.3     2.3 9.8E-05   18.9   6.8   58   36-93    130-199 (311)
 45 2p9r_A Alpha-2-M, alpha-2-macr  78.7     2.4  0.0001   18.8   9.3   47  228-274    39-97  (102)
 46 1f86_A Transthyretin Thr119Met  77.3     2.7 0.00011   18.6   5.9   43   53-95     16-64  (115)
 47 2h0e_A Transthyretin-like prot  77.2     2.6 0.00011   18.6   4.2   54   39-95     11-69  (121)
 48 2xsu_A Catechol 1,2 dioxygenas  75.4       3 0.00013   18.2   6.6   59   35-93    133-203 (312)
 49 2v5m_A Dscam; neurobiology SPL  73.3     3.4 0.00014   17.9   9.8   53  221-276   333-388 (388)
 50 1nqj_A Class 1 collagenase; be  70.6     3.9 0.00016   17.5   7.9   12  169-180    94-105 (119)
 51 1dmh_A 1,2-CTD, catechol 1,2-d  68.6     4.3 0.00018   17.2   6.8   58   36-93    131-202 (311)
 52 1f00_I Intimin; immunoglobulin  68.6     4.3 0.00018   17.2   8.3   64   37-102    19-84  (282)
 53 1oo2_A Transthyretin; retinol-  64.3     5.1 0.00022   16.7   5.9   56   39-95      4-65  (119)
 54 3gf8_A Putative polysaccharide  63.2     5.4 0.00023   16.6   5.5   20   82-101    68-87  (296)
 55 3mlq_E Transcription-repair co  63.0     5.4 0.00023   16.5   3.6   46   85-130     2-47  (71)
 56 2boy_A 3-chlorocatechol 1,2-di  61.5     5.8 0.00024   16.4   9.5   59   35-93     99-169 (254)
 57 2h4e_A Transthyretin; amyloid,  61.4     5.8 0.00024   16.4   5.9   56   39-95     12-73  (127)
 58 2bum_A Protocatechuate 3,4-dio  60.9     5.9 0.00025   16.3   5.3   58   35-92     49-124 (209)
 59 2g2n_A Transthyretin-like prot  60.7       6 0.00025   16.3   5.9   56   39-95      6-66  (114)
 60 3eja_A Protein GH61E; beta san  53.9     6.5 0.00027   16.0   2.4   12  169-180   126-137 (208)
 61 1qfh_A Protein (gelation facto  51.1     8.5 0.00036   15.3  13.9   15   86-100    77-91  (212)
 62 2qfe_A Calpain-7; C2-like doma  49.8     8.9 0.00038   15.2   3.8   34  249-282   110-143 (148)
 63 3iwv_A 5-hydroxyisourate hydro  48.8     9.2 0.00039   15.1   3.6   56   39-95     28-90  (138)
 64 3d33_A Domain of unknown funct  48.4     9.4 0.00039   15.0   9.9   53  222-274    46-108 (108)
 65 1zdv_A Outer membrane usher pr  46.5      10 0.00042   14.8   3.3   14   85-98      3-16  (115)
 66 3o6u_A Uncharacterized protein  42.3      12 0.00049   14.4   5.1   36  170-205     2-38  (128)
 67 1lyq_A PCOC copper resistance   41.4      12  0.0005   14.3   4.5   23  248-270    73-98  (104)
 68 2j3s_A Filamin-A; acetylation,  39.5      13 0.00054   14.1  11.5  186   71-275    51-284 (288)
 69 3hn5_A Putative exported prote  37.7      14 0.00057   14.0  11.4   74   37-111     9-92  (215)
 70 3pay_A Putative adhesin; struc  35.4      15 0.00062   13.7   5.3   16   85-100    71-86  (314)
 71 2eyq_A TRCF, transcription-rep  32.0      17 0.00071   13.4   3.6   28  248-275   477-504 (1151)
 72 2dlg_A Filamin-B; beta-sandwic  29.0      19 0.00079   13.1   6.6   24  253-276    66-90  (102)
 73 2e7m_A Protein KIAA0319; PKD d  26.9      21 0.00086   12.8   6.6   11  248-258    74-84  (113)
 74 2kzx_A Uncharacterized protein  26.6      21 0.00087   12.8   4.6   37  170-206     1-38  (131)
 75 3jqw_A COLH protein, collagena  22.9      24   0.001   12.3  11.4   12  169-180    91-102 (121)
 76 2inu_A Inulin fructotransferas  22.7      25   0.001   12.3   1.9   10   84-93     60-69  (410)
 77 3lpw_A A77-A78 domain from tit  21.8      26  0.0011   12.2  14.9   18  164-181   159-177 (197)
 78 2d7p_A Filamin-C; beta-sandwic  21.6      26  0.0011   12.2   6.3   27  252-278    75-102 (112)
 79 3bwu_D FIMD, outer membrane us  21.0      27  0.0011   12.1   4.0   12   85-96     27-38  (125)
 80 2bcm_B F1845 fimbrial protein;  20.4      27  0.0011   12.0   1.8   13  168-180   121-133 (165)

No 1  
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579}
Probab=99.77  E-value=1.8e-16  Score=123.13  Aligned_cols=248  Identities=9%  Similarity=0.060  Sum_probs=135.4

Q ss_pred             EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCE-----EEEEEECCC
Q ss_conf             279999986887753467599999538887620588982468566302267218999961577752-----789980686
Q gi|254780160|r   38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVV-----KKITVSSKE  112 (298)
Q Consensus        38 ~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~-----~~vtV~~~~  112 (298)
                      +|.|...  +..+..|+||+|+||+... .......+|+++|.+.+.+|+||+|.|+|...|.+|.     ..+++....
T Consensus         9 ~i~i~K~--d~~~~~L~Ga~f~l~~~~g-~~~~~~~tTd~~G~~~f~~L~~G~Y~v~E~~aP~GY~~~~~~~~~~v~~~~   85 (355)
T 3kpt_A            9 AVDLIKT--GVNEKAMAGAVFSLFKKDG-TEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFVKNSG   85 (355)
T ss_dssp             EEEEEEE--CGGGCBCCSCEEEEEETTS-CEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCCCCCEEEEECSCE
T ss_pred             EEEEEEE--CCCCCEECCCEEEEEECCC-CEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCC
T ss_conf             9999999--8999870895899998999-999787999999839999869632899999899982603442201651365


Q ss_pred             CEE----------EEEEECCCCEEEEEEEECCCC----CCCCCEEEEEEE------------------CCCCCE------
Q ss_conf             136----------787513664379998615788----777551899998------------------389743------
Q gi|254780160|r  113 KNQ----------KQVFILNAGGIRLYSIYKPGS----PIVDDELTFSIY------------------SNPNHK------  154 (298)
Q Consensus       113 ~~~----------~~~~~~~ag~~~~~~~~~~~~----~~~~~~~~f~i~------------------~~~~~~------  154 (298)
                      ...          ....+.......+........    ..+.....+.+.                  ......      
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (355)
T 3kpt_A           86 TINEDGTITSGTVVKMEVKNNEEPTIDKKINGKLEALPINPLTNYNYDIKTLIPEDIKEYKKYVVTDTLDNRLVIQGKPI  165 (355)
T ss_dssp             EECTTSSCEEECEEEEEEECCBCCCEEEEETTTBSEEEECTTCCEEEEEEEECCTTGGGCSEEEEEEECCTTEEECSCCE
T ss_pred             EEEEECEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEECCEEEEEEECCCCCEEECCEEE
T ss_conf             03440115245305778720012110111245125543036754157876325420001347999982656378526046


Q ss_pred             ------------EEE----------EEECCCCCEEEEECCCCEEEEEEECCCCCEEEE--E--EEECCCCE-----EEEE
Q ss_conf             ------------566----------750567513521067617999961577854454--4--88428863-----7899
Q gi|254780160|r  155 ------------ALL----------ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST--V--VKVEPGKI-----IDVT  203 (298)
Q Consensus       155 ------------~~~----------~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~--~--i~V~~g~~-----~~~t  203 (298)
                                  ...          ............+..+.|.+++...|.++....  .  +.......     ....
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (355)
T 3kpt_A          166 VKIDGAEVNANVVEVAIEGQKVTATVKDFTKMDGKKEFHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEKESKPVV  245 (355)
T ss_dssp             EEETTEECCTTTEEEEEETTEEEEEECCSGGGTTCCEEEEEEEEEECTTCCTTCCEEECCEEEEECTTCCEEEEECCCEE
T ss_pred             EEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEECCCCEEEEECCCCEEEEEEEEEEE
T ss_conf             77527653001588832686798986202333463234444127988733665030344307897357603555666678


Q ss_pred             EEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCE----------EEECCCCEEECCCCCEEEEEEEECCCCEEEE----
Q ss_conf             99345238999983478863276089998389979----------7421252121244870289999538824677----
Q gi|254780160|r  204 IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT----------VGESANASPSMVLSEGDYTVIARNKERNYSR----  269 (298)
Q Consensus       204 v~~~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~----------vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~----  269 (298)
                      .....+.+.+.+++..++++|+||.|.|++.+|..          +++.+|.+.+.+|++|+|+|.+..+|.+|..    
T Consensus       246 ~~~~~g~~~~~K~d~~~~~~L~Ga~F~l~~~~g~~v~~~~~~~t~~Td~~G~~~~~~L~~G~Y~l~EtkaP~GY~~~~~~  325 (355)
T 3kpt_A          246 VIPTTGIIELTKIDSANKNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTK  325 (355)
T ss_dssp             EEECEEEEEEEEEETTTCCBCSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEEECCEEECTTCCE
T ss_pred             EEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCCEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf             86741524799974888830188589999179999950574768998999889989998935999999789974357764


Q ss_pred             --------EEEEEECCC-CEEEEEEECH
Q ss_conf             --------799972885-0489997410
Q gi|254780160|r  270 --------EFSVLTGKS-TIVEVLMRQK  288 (298)
Q Consensus       270 --------~ftV~~g~~-~~veV~~~~~  288 (298)
                              ++.|...++ ..+++.+.++
T Consensus       326 ~~y~~~~~~i~~~i~~~~~~~~~t~~n~  353 (355)
T 3kpt_A          326 TSYQLLKDPIDVKISENNQTVKLTIENN  353 (355)
T ss_dssp             EECCCCCSCEEEECBTTBCEEEEEEEEC
T ss_pred             CCEEECCCEEEEEEEECCEEEEEEEEEC
T ss_conf             4459749608999951992999999957


No 2  
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae}
Probab=99.64  E-value=9.5e-15  Score=112.02  Aligned_cols=162  Identities=18%  Similarity=0.169  Sum_probs=103.0

Q ss_pred             CCCCCCCCCCEEEEEEECCCCCCCE--------------------EEEEEECCCCEEEECCCCCEEEEEEEECCCCCE--
Q ss_conf             6887753467599999538887620--------------------588982468566302267218999961577752--
Q gi|254780160|r   46 TENSTSIDSGVSWHIFDSISNKKNT--------------------LSTTKKIIGGKVSFDLFPGDYLISASFGHVGVV--  103 (298)
Q Consensus        46 ~~~~~~~~~G~~~~vy~~~~~~~g~--------------------~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~--  103 (298)
                      .+....+++|+.|+||....+.++.                    ...+|+++|...+.+|++|+|.|++..++.++.  
T Consensus        25 ~~~~~~pl~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~E~~ap~gy~~~  104 (239)
T 2pz4_A           25 APKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRNV  104 (239)
T ss_dssp             CCSSCEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEECTTB
T ss_pred             CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf             16899373786899999313664521045550234301678968899998999879988669846999999789885257


Q ss_pred             EEEEEECCCCEEEEE-EECCCCEEEEEEEEC-CCCCCCCCEEEEEEECCCCCE----------------EEEEEECCCCC
Q ss_conf             789980686136787-513664379998615-788777551899998389743----------------56675056751
Q gi|254780160|r  104 KKITVSSKEKNQKQV-FILNAGGIRLYSIYK-PGSPIVDDELTFSIYSNPNHK----------------ALLITDKVRSG  165 (298)
Q Consensus       104 ~~vtV~~~~~~~~~~-~~~~ag~~~~~~~~~-~~~~~~~~~~~f~i~~~~~~~----------------~~~~t~~~~~~  165 (298)
                      .++++..+....... .....+.+.+.++.. .....++++++|.|+..++..                ..+.++..|..
T Consensus       105 ~~~~v~~~~~~~~~~~~~~~~g~~~~~K~~~d~~~~~~L~gA~f~l~~~~g~~~~~~~~~~~~~~~~~~~~~~Td~~G~~  184 (239)
T 2pz4_A          105 SAFLVDLSEDKVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHI  184 (239)
T ss_dssp             CCEEEEESSCEEECCCBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEE
T ss_pred             CCEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEECCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCE
T ss_conf             64799707871797878631015999996356887620077599999289988543475330467722337998999829


Q ss_pred             EEEEECCCCEEEEEEECCCCCEEE---EEEEECCCCEEEEEEEEC
Q ss_conf             352106761799996157785445---448842886378999934
Q gi|254780160|r  166 TLVRLGTNNYQITSHYGKYNAIVS---TVVKVEPGKIIDVTIQNR  207 (298)
Q Consensus       166 ~~~~L~~G~Y~v~et~a~~~~~~~---~~i~V~~g~~~~~tv~~~  207 (298)
                      .+.+|++|+|+|+|+.+|.||.+.   ..|+|..++...+++.+.
T Consensus       185 ~~~~L~~G~Y~l~E~~aP~GY~l~~~~~~~tv~~~~~~~~~v~N~  229 (239)
T 2pz4_A          185 RISGLIHGDYVLKEIETQSGYQIGQAETAVTIEKSKTVTVTIENK  229 (239)
T ss_dssp             EEEEEESEEEEEEEEECCTTBCCCCSEEEEEECTTSEEEEEEEEE
T ss_pred             EECCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCEEEEEEEEE
T ss_conf             887779954999997899996948964899993998799999931


No 3  
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae}
Probab=99.60  E-value=1.3e-14  Score=111.24  Aligned_cols=155  Identities=12%  Similarity=0.122  Sum_probs=110.4

Q ss_pred             CCCCCEEEEEEECCC----------------------CCE-EEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEE
Q ss_conf             777551899998389----------------------743-566750567513521067617999961577854454488
Q gi|254780160|r  137 PIVDDELTFSIYSNP----------------------NHK-ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK  193 (298)
Q Consensus       137 ~~~~~~~~f~i~~~~----------------------~~~-~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i~  193 (298)
                      ..|+.+++|.++...                      +.. ...+++..|...+.+|++|+|+++|+.+|.+|....+++
T Consensus        29 ~~pl~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~E~~ap~gy~~~~~~~  108 (239)
T 2pz4_A           29 GTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRNVSAFL  108 (239)
T ss_dssp             CEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEECTTBCCEE
T ss_pred             CCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCEE
T ss_conf             93737868999993136645210455502343016789688999989998799886698469999997898852576479


Q ss_pred             ECCCCEEEE--EEEECCCEEEEEEEE--CCCCCCCCCEEEEEECCCCC-------------------EEEECCCCEEECC
Q ss_conf             428863789--999345238999983--47886327608999838997-------------------9742125212124
Q gi|254780160|r  194 VEPGKIIDV--TIQNRAAKITFKLVS--EMGGEAVADTAWSILTASGD-------------------TVGESANASPSMV  250 (298)
Q Consensus       194 V~~g~~~~~--tv~~~~~~~~~~~v~--~~~G~~l~ga~~~i~~~~g~-------------------~vt~~~G~~~~~~  250 (298)
                      +..+....+  ......+.+.+.+++  ...+++|+||.|.|++.+|.                   .+++.+|.|.+.+
T Consensus       109 v~~~~~~~~~~~~~~~~g~~~~~K~~~d~~~~~~L~gA~f~l~~~~g~~~~~~~~~~~~~~~~~~~~~~Td~~G~~~~~~  188 (239)
T 2pz4_A          109 VDLSEDKVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISG  188 (239)
T ss_dssp             EEESSCEEECCCBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEEEEEE
T ss_pred             EECCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEECCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCEEECC
T ss_conf             97078717978786310159999963568876200775999992899885434753304677223379989998298877


Q ss_pred             CCCEEEEEEEECCCCEEE-----EEEEEEECCCCEEEEEEECHHCCCC
Q ss_conf             487028999953882467-----7799972885048999741010356
Q gi|254780160|r  251 LSEGDYTVIARNKERNYS-----REFSVLTGKSTIVEVLMRQKRMDKN  293 (298)
Q Consensus       251 L~~G~Y~v~a~~~~~~y~-----~~ftV~~g~~~~veV~~~~~~~~~~  293 (298)
                      |++|+|++.+...|.+|.     ..|+|..+  ..+.+.+.++....+
T Consensus       189 L~~G~Y~l~E~~aP~GY~l~~~~~~~tv~~~--~~~~~~v~N~k~~~p  234 (239)
T 2pz4_A          189 LIHGDYVLKEIETQSGYQIGQAETAVTIEKS--KTVTVTIENKKVPTP  234 (239)
T ss_dssp             EESEEEEEEEEECCTTBCCCCSEEEEEECTT--SEEEEEEEEEBCCCC
T ss_pred             CCCCEEEEEEEECCCCCCCCCCEEEEEEECC--CEEEEEEEEEECCCC
T ss_conf             7995499999789999694896489999399--879999993167999


No 4  
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=99.13  E-value=3.2e-08  Score=69.77  Aligned_cols=84  Identities=12%  Similarity=0.131  Sum_probs=54.9

Q ss_pred             CEEEEEEEEC-CCCCCCCCEEEEEECCCC-----------------CEEEECCCCEEE--------------------CC
Q ss_conf             2389999834-788632760899983899-----------------797421252121--------------------24
Q gi|254780160|r  209 AKITFKLVSE-MGGEAVADTAWSILTASG-----------------DTVGESANASPS--------------------MV  250 (298)
Q Consensus       209 ~~~~~~~v~~-~~G~~l~ga~~~i~~~~g-----------------~~vt~~~G~~~~--------------------~~  250 (298)
                      +...+.+++. ....+|+||.|.|+...+                 ..+++..|.+.+                    ..
T Consensus       307 ~~~~i~K~~~~~~~~~l~gA~F~l~~~~~~~~~~~~~~~~~~~~~~~~~td~~G~~~~~~l~~~~~~~~~~~~~~~~~~~  386 (436)
T 3hr6_A          307 GQITIEKSFDGNTPGADRTATFQLHRCEADGSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWA  386 (436)
T ss_dssp             EEEEEEEEETTBCCCTTCCCEEEEEEECTTSCBCTTCCCCCBTTBCCEECCTTSEEEEEEEEEEEEEEETTEEEEEETTT
T ss_pred             CCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEECCCEEEEEECCCCEEEECCCCCCCEEECCCCCCEEEECC
T ss_conf             51378970357875102661799996467621320255111166059998999839974675452141034443021057


Q ss_pred             CCCEEEEEEEECCCCEEEE-----EEEEEECCCC--EEEEEEECHHCCC
Q ss_conf             4870289999538824677-----7999728850--4899974101035
Q gi|254780160|r  251 LSEGDYTVIARNKERNYSR-----EFSVLTGKST--IVEVLMRQKRMDK  292 (298)
Q Consensus       251 L~~G~Y~v~a~~~~~~y~~-----~ftV~~g~~~--~veV~~~~~~~~~  292 (298)
                      |++|+|.|++..+|.+|..     .|+|......  .++..++..|-+|
T Consensus       387 l~~g~Y~l~EtkAP~GY~l~~~pi~fti~~~~~~~~~~~~~~~v~N~k~  435 (436)
T 3hr6_A          387 GKGTEFCLVETATASGYELLPKPVIVKLEANESTNVLVEQKVKIDNKKK  435 (436)
T ss_dssp             TSCSEEEEEEEECCTTCBCCSSCEEECCCCCTTCCSCEEEEEEEEEBC-
T ss_pred             CCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCC
T ss_conf             8887599999378999675997589999627852477677799531579


No 5  
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=98.99  E-value=1.5e-09  Score=78.31  Aligned_cols=81  Identities=17%  Similarity=0.295  Sum_probs=65.8

Q ss_pred             CCCEEEEEEEECCCCCCCCCEEEEEECCCCC----------------EEEECCCCEEECCCCCEEEEEEEECCCCEEEE-
Q ss_conf             4523899998347886327608999838997----------------97421252121244870289999538824677-
Q gi|254780160|r  207 RAAKITFKLVSEMGGEAVADTAWSILTASGD----------------TVGESANASPSMVLSEGDYTVIARNKERNYSR-  269 (298)
Q Consensus       207 ~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~----------------~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~-  269 (298)
                      ..+.+.+.+++..++++|+||.|+|++.+|+                ..++.+|.+.+.+|++|+|++++..+|.+|+. 
T Consensus       734 ~~g~v~~~K~d~~~~~~L~GA~F~l~~~~~~~~~~~~~~~~~~~~~~~~T~~~G~~~~~~L~~G~Y~l~EtkAP~GY~~~  813 (893)
T 2ww8_A          734 KLGDIEFIKVNKNDKKPLRGAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLTFKNLSDGKYRLFENSEPAGYKPV  813 (893)
T ss_dssp             CCEEEEEEEEETTTCCBCSSCEEEEEEECSSCSSCEECSSSSCTTSSEECCTTCEEEEEEECSEEEEEEEEECCTTBCCC
T ss_pred             EEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf             67469999960889977388489999768971001100357860678996899989979889825899999789986616


Q ss_pred             ------EEEEEECCCCEEEEEEEC
Q ss_conf             ------799972885048999741
Q gi|254780160|r  270 ------EFSVLTGKSTIVEVLMRQ  287 (298)
Q Consensus       270 ------~ftV~~g~~~~veV~~~~  287 (298)
                            .|+|..|+...+..+...
T Consensus       814 ~~~~~~~~~i~~~~~~~~~~~~~~  837 (893)
T 2ww8_A          814 QNKPIVAFQIVNGEVRDVTSIVPQ  837 (893)
T ss_dssp             EEEEEEEEEEETTEEEEEEECCCT
T ss_pred             CCCCEEEEEEECCCEEEEEEECCC
T ss_conf             888639999947936567886168


No 6  
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=98.99  E-value=5.4e-08  Score=68.33  Aligned_cols=75  Identities=12%  Similarity=0.196  Sum_probs=58.6

Q ss_pred             EEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCE-----EEEEEECCCCE
Q ss_conf             9999986887753467599999538887620588982468566302267218999961577752-----78998068613
Q gi|254780160|r   40 TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVV-----KKITVSSKEKN  114 (298)
Q Consensus        40 ~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~-----~~vtV~~~~~~  114 (298)
                      .+..+++++++.+|+||+|+|+++..+.. ...++|+++|.+.+.+|+||+|+|+|..+|.+|.     ..|+|..++..
T Consensus        49 ~v~i~K~~~~g~~L~gA~F~L~~~~~~~~-v~~~TTd~~G~~tf~~L~pG~Y~l~Et~AP~GY~~~~~~~~vtv~~~~~~  127 (893)
T 2ww8_A           49 KVVIKETGEGGALLGDAVFELKNNTDGTT-VSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKNGRT  127 (893)
T ss_dssp             EEEEEEECSTTCBCCCCEEEEEETTTCCE-EEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEECTTCCE
T ss_pred             EEEEEEECCCCCCCCCCEEEEEECCCCEE-EEEEEECCCCEEEECCCCCEEEEEEEEECCCCEEECCCEEEEEECCCCEE
T ss_conf             89999978999846898899998999969-77999899868999981887899999868998488897689999469769


Q ss_pred             E
Q ss_conf             6
Q gi|254780160|r  115 Q  115 (298)
Q Consensus       115 ~  115 (298)
                      .
T Consensus       128 ~  128 (893)
T 2ww8_A          128 T  128 (893)
T ss_dssp             E
T ss_pred             E
T ss_conf             9


No 7  
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=98.92  E-value=2e-10  Score=84.00  Aligned_cols=146  Identities=15%  Similarity=0.095  Sum_probs=94.7

Q ss_pred             CCCCCCEEEEEEECCCCCEE---EEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEE-------EEECCCC--E----
Q ss_conf             87775518999983897435---667505675135210676179999615778544544-------8842886--3----
Q gi|254780160|r  136 SPIVDDELTFSIYSNPNHKA---LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTV-------VKVEPGK--I----  199 (298)
Q Consensus       136 ~~~~~~~~~f~i~~~~~~~~---~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~-------i~V~~g~--~----  199 (298)
                      ....+..+.|.++.......   ...++..+...+..|.++.|+.++..+|.+|.....       +++....  .    
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~y~~~e~~~~gy~~~~~~~~~~~~~~i~~~~~~~~~~~  254 (444)
T 2x9x_A          175 PIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPL  254 (444)
T ss_dssp             BCCCCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEEEEECCCCCCCB
T ss_pred             CCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCEEE
T ss_conf             35567504789983467602225787146750787513567427999974788501000026750699972144342050


Q ss_pred             EEEEEEECCCEEEEEEEECCCCCCCCCEEEEEECCCCC------------------------------------------
Q ss_conf             78999934523899998347886327608999838997------------------------------------------
Q gi|254780160|r  200 IDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGD------------------------------------------  237 (298)
Q Consensus       200 ~~~tv~~~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~------------------------------------------  237 (298)
                      .........+.+.+.+++. .+++|+||+|.|++.++.                                          
T Consensus       255 ~~~~~~~~~~~~~~~k~d~-~~~~l~ga~f~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (444)
T 2x9x_A          255 DPTEPKVVTYGKKFVKVND-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQT  333 (444)
T ss_dssp             CCCCCEEECEEEEEEEECT-TCCBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTSCCC---
T ss_pred             CCCCCCEEECCEEEEEECC-CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCC
T ss_conf             3666657967789999589-998838878999977895689876146533100003554522567412440233135430


Q ss_pred             --------------------------------------EEEECCCCEEECCCCCEEEEEEEECCCCEEEE-----EEEEE
Q ss_conf             --------------------------------------97421252121244870289999538824677-----79997
Q gi|254780160|r  238 --------------------------------------TVGESANASPSMVLSEGDYTVIARNKERNYSR-----EFSVL  274 (298)
Q Consensus       238 --------------------------------------~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~-----~ftV~  274 (298)
                                                            .+++.+|.+.+.+|++|+|+|++..+|.+|+.     .|+|.
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~~~~i~ftV~  413 (444)
T 2x9x_A          334 QQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVT  413 (444)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSCCCCSCEEEEEC
T ss_pred             EECEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEE
T ss_conf             00302599998514456434660699997689848999998999859989889784899997899993977864899996


Q ss_pred             ECCCCEEE
Q ss_conf             28850489
Q gi|254780160|r  275 TGKSTIVE  282 (298)
Q Consensus       275 ~g~~~~ve  282 (298)
                      .+.....+
T Consensus       414 ~~~~~~~~  421 (444)
T 2x9x_A          414 ATSYSATG  421 (444)
T ss_dssp             TTTTTCSS
T ss_pred             CCCEEECC
T ss_conf             89614144


No 8  
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=98.90  E-value=1.4e-08  Score=72.09  Aligned_cols=93  Identities=12%  Similarity=0.022  Sum_probs=55.3

Q ss_pred             CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEE--EECCCCE
Q ss_conf             66437999861578877755189999838974356675056751352106761799996157785445448--8428863
Q gi|254780160|r  122 NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVV--KVEPGKI  199 (298)
Q Consensus       122 ~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i--~V~~g~~  199 (298)
                      ..+.+.+.+++..+  .++++++|.|+..++.....+.+ +|...+.+|++|+|+|+|+.+|.||.+..++  +|.....
T Consensus        26 ~~~~v~i~K~D~~g--~~L~GA~F~l~~~~g~~v~~~~t-dG~~~~~~L~~G~Y~l~E~~aP~GY~~~~~~~ftv~~~~~  102 (121)
T 2x5p_A           26 SATHIKFSKRDIDG--KELAGATMELRDSSGKTISTWIS-DGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTVNEQGQ  102 (121)
T ss_dssp             CCEEEEEEEECTTC--CBCCCCEEEEECTTSCEEEEEEC-CSSCEEEEECSEEEEEEEEECCTTCCCCCCEEEEECTTCC
T ss_pred             CCEEEEEEEECCCC--CEECCEEEEEEECCCCEEEEEEC-CCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCE
T ss_conf             81899999992995--99579799999898999999923-9989988669978999997289997918968899988868


Q ss_pred             EEEEEEECCCEEEEEEEE
Q ss_conf             789999345238999983
Q gi|254780160|r  200 IDVTIQNRAAKITFKLVS  217 (298)
Q Consensus       200 ~~~tv~~~~~~~~~~~v~  217 (298)
                      ..+......+.+.+.++|
T Consensus       103 vtv~~~~~~g~~~i~K~D  120 (121)
T 2x5p_A          103 VTVNGKATKGDAHIVMVD  120 (121)
T ss_dssp             EEETTEEECSSEEEEEEC
T ss_pred             EEEEEEEEEEEEEEEEEC
T ss_conf             999978744249999826


No 9  
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=98.81  E-value=3.5e-08  Score=69.56  Aligned_cols=87  Identities=22%  Similarity=0.306  Sum_probs=48.7

Q ss_pred             EECCCCEEEEEEEEC-CCEEEEEEEECCCCCCCCCEEEEEECCCCCEE--EECCCCEEECCCCCEEEEEEEECCCCEEEE
Q ss_conf             842886378999934-52389999834788632760899983899797--421252121244870289999538824677
Q gi|254780160|r  193 KVEPGKIIDVTIQNR-AAKITFKLVSEMGGEAVADTAWSILTASGDTV--GESANASPSMVLSEGDYTVIARNKERNYSR  269 (298)
Q Consensus       193 ~V~~g~~~~~tv~~~-~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~v--t~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~  269 (298)
                      ..+.++...+++... .+.+.+.+++. .|++|+||.|.|++.+|.++  +.++|.+.+.+|++|+|++.+..+|.+|..
T Consensus        11 ~~~~~~~~~~~i~~~~~~~v~i~K~D~-~g~~L~GA~F~l~~~~g~~v~~~~tdG~~~~~~L~~G~Y~l~E~~aP~GY~~   89 (121)
T 2x5p_A           11 SSEQGQSGDMTIEEDSATHIKFSKRDI-DGKELAGATMELRDSSGKTISTWISDGQVKDFYLMPGKYTFVETAAPDGYEV   89 (121)
T ss_dssp             --------------CCCEEEEEEEECT-TCCBCCCCEEEEECTTSCEEEEEECCSSCEEEEECSEEEEEEEEECCTTCCC
T ss_pred             EECCCCCCCEEECCCCCEEEEEEEECC-CCCEECCEEEEEEECCCCEEEEEECCCEEEECCCCCCEEEEEEECCCCCCCC
T ss_conf             502685442898469818999999929-9599579799999898999999923998998866997899999728999791


Q ss_pred             --EEEEEECCCCE
Q ss_conf             --79997288504
Q gi|254780160|r  270 --EFSVLTGKSTI  280 (298)
Q Consensus       270 --~ftV~~g~~~~  280 (298)
                        ++++....+..
T Consensus        90 ~~~~~ftv~~~~~  102 (121)
T 2x5p_A           90 ATAITFTVNEQGQ  102 (121)
T ss_dssp             CCCEEEEECTTCC
T ss_pred             CCCEEEEECCCCE
T ss_conf             8968899988868


No 10 
>2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A
Probab=98.76  E-value=3.4e-08  Score=69.59  Aligned_cols=77  Identities=9%  Similarity=0.053  Sum_probs=60.2

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCEE----EEEEEC
Q ss_conf             0232799999868877534675999995388876205889824685663022672189999615777527----899806
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVK----KITVSS  110 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~~----~vtV~~  110 (298)
                      ...+|.|.....+|...+|+||+|+||+......  ...+++.+|...+.+|+||+|+|+|..+|.+|..    .++|..
T Consensus        23 ~~~~~~i~Kvd~~d~~k~L~GA~F~l~~~~g~~~--~~~ttd~~G~~~~~~L~~GtY~l~E~~AP~GY~l~~~~~~tV~~  100 (457)
T 2xi9_A           23 QTTSVLIRKYAIGDYSKLLEGATLQLTGDNVNSF--QARVFSSNDIGERIELSDGTYTLTELNSPAGYSIAEPITFKVEA  100 (457)
T ss_dssp             --CEEEEEEEETTBCSSCCCCCEEEEC-----------CEEECCSSCEEEECCSEEEEEEEEECCTTBCCCCCEEEEEET
T ss_pred             CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEE--EEEEECCCCEEEECCCCCCCEEEEEEECCCCCEECCCEEEEEEC
T ss_conf             3268999997268999798884899996899989--99998789848989839941899998799982908975899906


Q ss_pred             CCC
Q ss_conf             861
Q gi|254780160|r  111 KEK  113 (298)
Q Consensus       111 ~~~  113 (298)
                      ++.
T Consensus       101 ~~~  103 (457)
T 2xi9_A          101 GKV  103 (457)
T ss_dssp             TEE
T ss_pred             CCE
T ss_conf             954


No 11 
>2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A
Probab=98.71  E-value=3.7e-08  Score=69.40  Aligned_cols=81  Identities=12%  Similarity=0.143  Sum_probs=64.3

Q ss_pred             CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEE-EEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEE--EEECCCC
Q ss_conf             6643799986157887775518999983897435-667505675135210676179999615778544544--8842886
Q gi|254780160|r  122 NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKA-LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTV--VKVEPGK  198 (298)
Q Consensus       122 ~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~-~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~--i~V~~g~  198 (298)
                      ..+.+.+.+++..+...++++|+|.|+..++... ..+++..|...+.+|++|+|+|+|+.||.||.+..+  |+|..++
T Consensus        23 ~~~~~~i~Kvd~~d~~k~L~GA~F~l~~~~g~~~~~~ttd~~G~~~~~~L~~GtY~l~E~~AP~GY~l~~~~~~tV~~~~  102 (457)
T 2xi9_A           23 QTTSVLIRKYAIGDYSKLLEGATLQLTGDNVNSFQARVFSSNDIGERIELSDGTYTLTELNSPAGYSIAEPITFKVEAGK  102 (457)
T ss_dssp             --CEEEEEEEETTBCSSCCCCCEEEEC---------CEEECCSSCEEEECCSEEEEEEEEECCTTBCCCCCEEEEEETTE
T ss_pred             CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCCCCCEEEEEEECCCCCEECCCEEEEEECCC
T ss_conf             32689999972689997988848999968999899999878984898983994189999879998290897589990695


Q ss_pred             EEEE
Q ss_conf             3789
Q gi|254780160|r  199 IIDV  202 (298)
Q Consensus       199 ~~~~  202 (298)
                      ....
T Consensus       103 ~~~~  106 (457)
T 2xi9_A          103 VYTI  106 (457)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             4887


No 12 
>1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1
Probab=98.70  E-value=8.4e-06  Score=54.15  Aligned_cols=213  Identities=10%  Similarity=0.069  Sum_probs=108.4

Q ss_pred             CCCCCEEEEEEECCCCCCCEEEEEEECCCC--EEEECCCCC------EEEEEEEECCCCCEEEEEEECCCCEEEEEEE-C
Q ss_conf             534675999995388876205889824685--663022672------1899996157775278998068613678751-3
Q gi|254780160|r   51 SIDSGVSWHIFDSISNKKNTLSTTKKIIGG--KVSFDLFPG------DYLISASFGHVGVVKKITVSSKEKNQKQVFI-L  121 (298)
Q Consensus        51 ~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~--~~~~~L~pG------~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~-~  121 (298)
                      ...+++.+.||... ...+. ..+.+..|.  ..+.+||.+      .|.+.+...+.++.................. .
T Consensus       110 ~~~~~~~v~l~~~g-~~~~~-t~~~~~~g~w~~t~~~L~~~~~~~~~~ytv~e~~~~~g~~~~~~~~~~~~~~~~~~~~~  187 (373)
T 1d2p_A          110 KRPTEIKVELYQDG-KATGK-TAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTHVDNNDMGNLITTNKYTP  187 (373)
T ss_dssp             CCCSEEEEEEEETT-EEEEE-EEEEEGGGTTEEEEEEEESBSSSSBCCEEEEECSCCTTCEEEEECSCTTSEEEEEECCC
T ss_pred             CCCCEEEEEEEECC-EEEEE-EEEEECCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCEEEECCCC
T ss_conf             36760799999899-89247-99985589557560677756789759999986035667243203445444034100132


Q ss_pred             CCCEEEEEEEEC---CCCCCCCCEEEEEEECCCCCEEEE--EEECCCCCEEEEECCC------CEEEEEEECCCCCEEEE
Q ss_conf             664379998615---788777551899998389743566--7505675135210676------17999961577854454
Q gi|254780160|r  122 NAGGIRLYSIYK---PGSPIVDDELTFSIYSNPNHKALL--ITDKVRSGTLVRLGTN------NYQITSHYGKYNAIVST  190 (298)
Q Consensus       122 ~ag~~~~~~~~~---~~~~~~~~~~~f~i~~~~~~~~~~--~t~~~~~~~~~~L~~G------~Y~v~et~a~~~~~~~~  190 (298)
                      ....+...+...   ...+..+++++|.||.++......  ..++...+.+..|+++      .|.+.+...+ ++....
T Consensus       188 ~~~~i~~~~~~~~~~~~~g~~~~~~tv~l~~~g~~~~~~t~~~~~~w~~~f~~l~~~~~g~~~~ytv~e~~~~-g~~~~~  266 (373)
T 1d2p_A          188 ETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVK-DYTTDI  266 (373)
T ss_dssp             CEEEEEEEEEEESTTTTTSCCCSCEEEEEEETTEEEEEEEECGGGTSEEEEEEEESEETTEECCEEEEECCCT-TEEEEE
T ss_pred             CEECCCCEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCEEECCCCCCCCCCCEEEEEEEEECCC-CCEEEC
T ss_conf             1020344179837888677347757999997996966799741788569626687666783689999754167-725522


Q ss_pred             EEEECCCCEEEEEEEECCCEEEEEEE--ECC--CCCCCCCEEEEEECCCCCEE-----EECCC--CEEECCCC------C
Q ss_conf             48842886378999934523899998--347--88632760899983899797-----42125--21212448------7
Q gi|254780160|r  191 VVKVEPGKIIDVTIQNRAAKITFKLV--SEM--GGEAVADTAWSILTASGDTV-----GESAN--ASPSMVLS------E  253 (298)
Q Consensus       191 ~i~V~~g~~~~~tv~~~~~~~~~~~v--~~~--~G~~l~ga~~~i~~~~g~~v-----t~~~G--~~~~~~L~------~  253 (298)
                      .     +.....+...........+.  +..  .+.+..++.+.|+.. |..+     .++.|  .+.+.+||      +
T Consensus       267 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~l~~~-g~~~~~~~t~~~~g~wt~t~~~L~~~~~G~~  340 (373)
T 1d2p_A          267 N-----GTTITNKYTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQD-GKATGKTAILNESNNWTHTWTGLDEKAKGQQ  340 (373)
T ss_dssp             E-----TTEEEEEECTTEEEEEEEEEEESGGGTTSCCCSEEEEEEEET-TEEEEEEEEEETTTTTEEEEEEEESEETTEE
T ss_pred             C-----CEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEC-CEEEEEEEEECCCCCEEEEECCCCCCCCCCE
T ss_conf             5-----514321014445555302465038875466886289999989-9385458997389964999767654679988


Q ss_pred             EEEEEEEECCCCEEEEEEE
Q ss_conf             0289999538824677799
Q gi|254780160|r  254 GDYTVIARNKERNYSREFS  272 (298)
Q Consensus       254 G~Y~v~a~~~~~~y~~~ft  272 (298)
                      +.|+|.+...+.+|+..++
T Consensus       341 ~~Y~v~E~~~p~gY~~s~~  359 (373)
T 1d2p_A          341 VKYTVEELTKVKGYTTHVD  359 (373)
T ss_dssp             CCEEEEECSCCTTEEEEEE
T ss_pred             EEEEEEEECCCCCCEEEEE
T ss_conf             9999998158998489997


No 13 
>1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1
Probab=98.50  E-value=6.4e-05  Score=48.45  Aligned_cols=203  Identities=12%  Similarity=0.059  Sum_probs=109.9

Q ss_pred             CCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCC------EEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEE
Q ss_conf             4675999995388876205889824685663022672------1899996157775278998068613678751366437
Q gi|254780160|r   53 DSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPG------DYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGI  126 (298)
Q Consensus        53 ~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG------~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~~~ag~~  126 (298)
                      ++.+.++||.. ....+...+..+.++.+.+.+||.+      .|.+.+... .++...  ....  .............
T Consensus        22 p~~vtV~l~~~-g~~~~t~t~~~~g~w~~t~~~lp~~~~g~~~~ytV~e~~~-~g~~~~--~~~~--~~~~~~~~~~~~~   95 (373)
T 1d2p_A           22 PEKVSVNLLAN-GEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHV-KDYTTD--INGT--TITNKYTPGETSA   95 (373)
T ss_dssp             CSEEEEEEEET-TEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCC-TTEEEE--EETT--EEEEEECTTEEEE
T ss_pred             CCEEEEEEEEC-CEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEECC-CCCEEE--ECCE--EEEECCCCCCCCC
T ss_conf             87179999959-9498899988899879995888766799438999998568-984663--0220--5751235322223


Q ss_pred             EEEEEECC---CCCCCCCEEEEEEECCCCCEEEEE-EECCC--CCEEEEECCC------CEEEEEEECCCCCEEEEEEEE
Q ss_conf             99986157---887775518999983897435667-50567--5135210676------179999615778544544884
Q gi|254780160|r  127 RLYSIYKP---GSPIVDDELTFSIYSNPNHKALLI-TDKVR--SGTLVRLGTN------NYQITSHYGKYNAIVSTVVKV  194 (298)
Q Consensus       127 ~~~~~~~~---~~~~~~~~~~f~i~~~~~~~~~~~-t~~~~--~~~~~~L~~G------~Y~v~et~a~~~~~~~~~i~V  194 (298)
                      ...+....   .....+..+.|.|+.+........ ....+  .+.+.+|+.+      .|++.+...+.+|........
T Consensus        96 ~~~~~~~d~~~~~~~~~~~~~v~l~~~g~~~~~t~~~~~~g~w~~t~~~L~~~~~~~~~~ytv~e~~~~~g~~~~~~~~~  175 (373)
T 1d2p_A           96 TVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTHVDNND  175 (373)
T ss_dssp             EEEEEEESTTTTTSCCCSEEEEEEEETTEEEEEEEEEEGGGTTEEEEEEEESBSSSSBCCEEEEECSCCTTCEEEEECSC
T ss_pred             CCEEEEECCCCCCCCCCCEEEEEEEECCEEEEEEEEEECCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCC
T ss_conf             22014606887565367607999998998924799985589557560677756789759999986035667243203445


Q ss_pred             CCCCEEEEEEEEC--CCEEEEEEEE----CCCCCCCCCEEEEEECCCCCEE-----EECCCCEEECCCCCEE------EE
Q ss_conf             2886378999934--5238999983----4788632760899983899797-----4212521212448702------89
Q gi|254780160|r  195 EPGKIIDVTIQNR--AAKITFKLVS----EMGGEAVADTAWSILTASGDTV-----GESANASPSMVLSEGD------YT  257 (298)
Q Consensus       195 ~~g~~~~~tv~~~--~~~~~~~~v~----~~~G~~l~ga~~~i~~~~g~~v-----t~~~G~~~~~~L~~G~------Y~  257 (298)
                      ...  ..++....  ...+...++.    ...|.+.+++.|+|+..+...-     .+.++.+.+.+||.++      |+
T Consensus       176 ~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~tv~l~~~g~~~~~~t~~~~~~w~~~f~~l~~~~~g~~~~yt  253 (373)
T 1d2p_A          176 MGN--LITTNKYTPETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYT  253 (373)
T ss_dssp             TTS--EEEEEECCCCEEEEEEEEEEESTTTTTSCCCSCEEEEEEETTEEEEEEEECGGGTSEEEEEEEESEETTEECCEE
T ss_pred             CCC--CEEEECCCCCEECCCCEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCEEECCCCCCCCCCCEEEEE
T ss_conf             444--034100132102034417983788867734775799999799696679974178856962668766678368999


Q ss_pred             EEEECC
Q ss_conf             999538
Q gi|254780160|r  258 VIARNK  263 (298)
Q Consensus       258 v~a~~~  263 (298)
                      +.+...
T Consensus       254 v~e~~~  259 (373)
T 1d2p_A          254 VTEDHV  259 (373)
T ss_dssp             EEECCC
T ss_pred             EEEECC
T ss_conf             975416


No 14 
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=98.47  E-value=4.4e-07  Score=62.46  Aligned_cols=79  Identities=13%  Similarity=0.119  Sum_probs=66.9

Q ss_pred             CCEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEEEE
Q ss_conf             5238999983478863276089998389979742125212124487028999953882-467779997288504899974
Q gi|254780160|r  208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVLMR  286 (298)
Q Consensus       208 ~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~~~  286 (298)
                      ...+.+++.+..+|+||++|.+.|.+.+..++++.+|.|.. .|+||+|+|.++..++ ...+.+.|.+|+++.+++.|+
T Consensus       300 ~~~i~G~V~d~~~~~pi~~A~v~i~~~~~~~~td~~G~f~~-~l~~G~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~  378 (380)
T 1h8l_A          300 HRGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWR-LLVQGTYKVTASARGYDPVTKTVEVDSKGGVQVNFTLS  378 (380)
T ss_dssp             GCEEEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBCCEEEEEEECSSCEEECCEEEC
T ss_pred             CCEEEEEEEECCCCCCCCCEEEEEECCCCCEEECCCCCEEE-ECCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEEC
T ss_conf             01189999989999876884999943667648889985899-60883799999983604579999990898299999974


Q ss_pred             C
Q ss_conf             1
Q gi|254780160|r  287 Q  287 (298)
Q Consensus       287 ~  287 (298)
                      .
T Consensus       379 ~  379 (380)
T 1h8l_A          379 R  379 (380)
T ss_dssp             B
T ss_pred             C
T ss_conf             5


No 15 
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579}
Probab=98.36  E-value=1.2e-06  Score=59.68  Aligned_cols=85  Identities=18%  Similarity=0.146  Sum_probs=57.9

Q ss_pred             CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCE-------EEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEE----
Q ss_conf             664379998615788777551899998389743-------566750567513521067617999961577854454----
Q gi|254780160|r  122 NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHK-------ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST----  190 (298)
Q Consensus       122 ~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~-------~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~----  190 (298)
                      ..+.+.+.+++.. .+.++++++|.|+..++..       ...+++..|...+.+|++|+|+|+|+++|.+|....    
T Consensus       249 ~~g~~~~~K~d~~-~~~~L~Ga~F~l~~~~g~~v~~~~~~~t~~Td~~G~~~~~~L~~G~Y~l~EtkaP~GY~~~~~~~~  327 (355)
T 3kpt_A          249 TTGIIELTKIDSA-NKNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTKTS  327 (355)
T ss_dssp             CEEEEEEEEEETT-TCCBCSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEEECCEEECTTCCEEE
T ss_pred             ECCCEEEEEECCC-CCCCCCCCEEEEECCCCCEEEECCCEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCC
T ss_conf             4152479997488-883018858999917999995057476899899988998999893599999978997435776444


Q ss_pred             --------EEEECC-CCEEEEEEEEC
Q ss_conf             --------488428-86378999934
Q gi|254780160|r  191 --------VVKVEP-GKIIDVTIQNR  207 (298)
Q Consensus       191 --------~i~V~~-g~~~~~tv~~~  207 (298)
                              .|+|.+ ++..++++.+.
T Consensus       328 y~~~~~~i~~~i~~~~~~~~~t~~n~  353 (355)
T 3kpt_A          328 YQLLKDPIDVKISENNQTVKLTIENN  353 (355)
T ss_dssp             CCCCCSCEEEECBTTBCEEEEEEEEC
T ss_pred             EEECCCEEEEEEEECCEEEEEEEEEC
T ss_conf             59749608999951992999999957


No 16 
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, hormone processing, peptide modification; HET: NAG; 2.10A {Homo sapiens}
Probab=98.18  E-value=3.7e-06  Score=56.43  Aligned_cols=78  Identities=17%  Similarity=0.143  Sum_probs=62.1

Q ss_pred             CEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEEEEC
Q ss_conf             238999983478863276089998389979742125212124487028999953882-4677799972885048999741
Q gi|254780160|r  209 AKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVLMRQ  287 (298)
Q Consensus       209 ~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~~~~  287 (298)
                      ..+.+++. +..|+||++|.+.|...+..+.|+.+|.|.. .|+||.|++.++.-++ ..++.++|..++...+++.|+.
T Consensus       321 ~gi~G~V~-d~~g~pl~~A~V~v~g~~~~~~Td~~G~f~~-~l~~G~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~~  398 (439)
T 2nsm_A          321 QGIKGMVL-DQNYNNLANAVISVSGINHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPETVTVTVGPAEPTLVNFHLKR  398 (439)
T ss_dssp             CSEEEEEE-CTTSCBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEEEEEEECSSSCEECCEECEE
T ss_pred             CEEEEEEE-CCCCCCCCCEEEEEECCCCCEEECCCCCEEE-EECCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEECC
T ss_conf             33589998-7789737854999977616638889973999-837962799999957335799999858982999999822


Q ss_pred             H
Q ss_conf             0
Q gi|254780160|r  288 K  288 (298)
Q Consensus       288 ~  288 (298)
                      .
T Consensus       399 ~  399 (439)
T 2nsm_A          399 S  399 (439)
T ss_dssp             C
T ss_pred             C
T ss_conf             6


No 17 
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=97.86  E-value=1.1e-07  Score=66.27  Aligned_cols=145  Identities=11%  Similarity=0.010  Sum_probs=89.0

Q ss_pred             CCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCEEE---------EEEECCCCEEEEE----
Q ss_conf             346759999953888762058898246856630226721899996157775278---------9980686136787----
Q gi|254780160|r   52 IDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKK---------ITVSSKEKNQKQV----  118 (298)
Q Consensus        52 ~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~~~---------vtV~~~~~~~~~~----  118 (298)
                      ..+++.|.++....+.......+++.+|......|.++.|+..+...+.++...         +++..........    
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~y~~~e~~~~gy~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  257 (444)
T 2x9x_A          178 AGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPLDPT  257 (444)
T ss_dssp             CCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEEEEECCCCCCCBCCC
T ss_pred             CCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCEEECCC
T ss_conf             67504789983467602225787146750787513567427999974788501000026750699972144342050366


Q ss_pred             -EECCCCEEEEEEEECCCCCCCCCEEEEEEECCCCC--------------------------------------------
Q ss_conf             -51366437999861578877755189999838974--------------------------------------------
Q gi|254780160|r  119 -FILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNH--------------------------------------------  153 (298)
Q Consensus       119 -~~~~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~--------------------------------------------  153 (298)
                       .....+++.+.+.+..+  .++++++|.|+..++.                                            
T Consensus       258 ~~~~~~~~~~~~k~d~~~--~~l~ga~f~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (444)
T 2x9x_A          258 EPKVVTYGKKFVKVNDKD--NRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQTQQ  335 (444)
T ss_dssp             CCEEECEEEEEEEECTTC--CBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTSCCC-----
T ss_pred             CCCEEECCEEEEEECCCC--CCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCEE
T ss_conf             665796778999958999--883887899997789568987614653310000355452256741244023313543000


Q ss_pred             ---------------------------------EEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEE---EEEECCC
Q ss_conf             ---------------------------------3566750567513521067617999961577854454---4884288
Q gi|254780160|r  154 ---------------------------------KALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST---VVKVEPG  197 (298)
Q Consensus       154 ---------------------------------~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~---~i~V~~g  197 (298)
                                                       ...++++..|...+.+|+||+|+|+|+.||.||.+..   .|+|.++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~~~~i~ftV~~~  415 (444)
T 2x9x_A          336 EKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTAT  415 (444)
T ss_dssp             -CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSCCCCSCEEEEECTT
T ss_pred             CEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEECC
T ss_conf             30259999851445643466069999768984899999899985998988978489999789999397786489999689


Q ss_pred             C
Q ss_conf             6
Q gi|254780160|r  198 K  198 (298)
Q Consensus       198 ~  198 (298)
                      .
T Consensus       416 ~  416 (444)
T 2x9x_A          416 S  416 (444)
T ss_dssp             T
T ss_pred             C
T ss_conf             6


No 18 
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=97.79  E-value=0.0018  Score=39.12  Aligned_cols=226  Identities=14%  Similarity=0.065  Sum_probs=114.2

Q ss_pred             EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEE--CCCCCEEEEEEEECCCCCEEEEEEECCCCE-
Q ss_conf             27999998688775346759999953888762058898246856630--226721899996157775278998068613-
Q gi|254780160|r   38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSF--DLFPGDYLISASFGHVGVVKKITVSSKEKN-  114 (298)
Q Consensus        38 ~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~--~L~pG~Y~v~~s~g~~~~~~~vtV~~~~~~-  114 (298)
                      .+++++++.+..++++.|+...+-.............++++|.....  ...+|.|.+.++++.......+.+..+... 
T Consensus        27 ~~tvtvtv~D~~Gnpv~~~~Vt~t~~~~~~~~~~t~~Td~~G~~tvt~t~~~~Gt~tvtat~~g~~~t~~~~~~~~~~~~  106 (492)
T 1cwv_A           27 AITVEFTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQSVDTHFVKGTIAA  106 (492)
T ss_dssp             CEEEEEEEECTTSCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTEEEEEEEEEECCCBCG
T ss_pred             CEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEECCCCEEEEEEEECCCCEEEEEEEEECCEECCEEEEEEECCCCC
T ss_conf             67999999989989978988999978971214441241899799999957775699999998976210335898466643


Q ss_pred             ---EEEE-----EECCCC--EEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCC---CEEEEECCCCEEEEEEE
Q ss_conf             ---6787-----513664--3799986157887775518999983897435667505675---13521067617999961
Q gi|254780160|r  115 ---QKQV-----FILNAG--GIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRS---GTLVRLGTNNYQITSHY  181 (298)
Q Consensus       115 ---~~~~-----~~~~ag--~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~---~~~~~L~~G~Y~v~et~  181 (298)
                         ....     ......  .+.....+..+.+++...+.|..-  ... ....++...+   ..+....+|.|.+..+.
T Consensus       107 ~~~~~~~~~~~~~a~g~~~~tvt~tv~D~~Gn~v~~~~V~~~~~--~~~-~~~~t~~~~G~~t~t~t~~~~G~~~vt~t~  183 (492)
T 1cwv_A          107 DKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTT--LGN-MGVITDHNDGTYSAPLTSTTLGVATVTVKV  183 (492)
T ss_dssp             GGCEEEEESSEEETTSSCCEEEEEECBBTTSCBCCSCCEEEEES--SSE-ECCCEECSSSEEEEEEECSSCEEEEEEEEE
T ss_pred             CEEEEEECCCCEECCCCCEEEEEEEEECCCCCCCCCCCCEEECC--CCC-CEEEEECCCCEEEEEEEECCCCEEEEEEEE
T ss_conf             00147626762131463107999999868998345851001215--674-103676488607888840446347899998


Q ss_pred             CCCCCE-EEEEEEECCCCE-----EEEEEEE------CCCEEEEEE-EECCCCCCCCCEEEEEECCCCC-----EEEECC
Q ss_conf             577854-454488428863-----7899993------452389999-8347886327608999838997-----974212
Q gi|254780160|r  182 GKYNAI-VSTVVKVEPGKI-----IDVTIQN------RAAKITFKL-VSEMGGEAVADTAWSILTASGD-----TVGESA  243 (298)
Q Consensus       182 a~~~~~-~~~~i~V~~g~~-----~~~tv~~------~~~~~~~~~-v~~~~G~~l~ga~~~i~~~~g~-----~vt~~~  243 (298)
                      ...... ....+.+..+..     ..+....      ......+++ +.+..|.++.+........++.     .+++..
T Consensus       184 ~~~~~~~~s~~v~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~tvtvtv~D~~gn~v~~~~v~~~~~~g~~~~~~~~t~~~  263 (492)
T 1cwv_A          184 DGAAFSVPSVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQP  263 (492)
T ss_dssp             TTEEEEEEEEEEEEECCSSCCTTTCEEEESCSEEETTSCCCEEEEEECBCTTSCBCCSCCSEEEEEEESCCEECCCEECS
T ss_pred             CCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCC
T ss_conf             58642000368999503433321124672366144177320579999814688713574479980699537777898899


Q ss_pred             CC--EEECCCCCEEEEEEEECCCCE
Q ss_conf             52--121244870289999538824
Q gi|254780160|r  244 NA--SPSMVLSEGDYTVIARNKERN  266 (298)
Q Consensus       244 G~--~~~~~L~~G~Y~v~a~~~~~~  266 (298)
                      |.  +......+|.+++.+......
T Consensus       264 g~~t~t~t~~~~G~~tvtat~~~~~  288 (492)
T 1cwv_A          264 DSYTATVVGNSVGDVTITPQVDTLI  288 (492)
T ss_dssp             SCEEEEEECSSCEEEEEEEEETTEE
T ss_pred             CEEEEEEECCCCCEEEEEEEECCCC
T ss_conf             8699999766420399999991621


No 19 
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=97.69  E-value=0.00015  Score=46.08  Aligned_cols=54  Identities=13%  Similarity=0.169  Sum_probs=40.2

Q ss_pred             CCCCCCCCCEEEEEECCCC-CE-----EEECCCCEEECCCCCEEEEEEEECCCCEEEEEE
Q ss_conf             4788632760899983899-79-----742125212124487028999953882467779
Q gi|254780160|r  218 EMGGEAVADTAWSILTASG-DT-----VGESANASPSMVLSEGDYTVIARNKERNYSREF  271 (298)
Q Consensus       218 ~~~G~~l~ga~~~i~~~~g-~~-----vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~~f  271 (298)
                      ...+.+|++|.|.|++.++ ..     +++.+|.+.+.+|..|.|.+++..+|.+|+..+
T Consensus       170 ~~~~~~laga~F~l~~~~~~~~~~~~~~T~~~G~~~~~GL~~g~Y~l~EtkAP~GY~~~~  229 (262)
T 2x9z_A          170 GAPIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADY  229 (262)
T ss_dssp             SCBCCCCSCEEEEEEETTTCCEEEEEEECTTCSEEEECSCCTTSCEEEEECCBTTBEEEE
T ss_pred             CCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCC
T ss_conf             643345564148999736881887899947844599832578888999997889854212


No 20 
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=97.62  E-value=0.00012  Score=46.60  Aligned_cols=57  Identities=19%  Similarity=0.211  Sum_probs=42.3

Q ss_pred             CCCCCCCCCEEEEEEECCC---------------------------CCCCEEEEEEECCCCEEEECCCCCEEEEEEEECC
Q ss_conf             8877534675999995388---------------------------8762058898246856630226721899996157
Q gi|254780160|r   47 ENSTSIDSGVSWHIFDSIS---------------------------NKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGH   99 (298)
Q Consensus        47 ~~~~~~~~G~~~~vy~~~~---------------------------~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~   99 (298)
                      ..+..+++|+.|+||.-..                           +.......+|+++|...+.+|++|.|.|+|+.++
T Consensus        28 ~~~~~~l~G~~F~~~kv~~id~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tT~~~G~~~f~~L~~G~Y~v~Et~ap  107 (436)
T 3hr6_A           28 SIGLPKVDGMSFTLYRVNEIDLTTQAGWDAASKIKLEELYTNGHPTDKVTKVATKKTEGGVAKFDNLTPALYLVVQELNG  107 (436)
T ss_dssp             --CCCBCSSCEEEEEEETTCCTTSHHHHHHHTTCCHHHHEETTEECTTEEEEEEEECBTTBEEEEEECSEEEEEEECSCS
T ss_pred             CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECC
T ss_conf             77898679968999991353344865644431145000014553467503345667799849989868787999998458


Q ss_pred             CCCE
Q ss_conf             7752
Q gi|254780160|r  100 VGVV  103 (298)
Q Consensus       100 ~~~~  103 (298)
                      .++.
T Consensus       108 ~gy~  111 (436)
T 3hr6_A          108 AEAV  111 (436)
T ss_dssp             SSCE
T ss_pred             CCCE
T ss_conf             8847


No 21 
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, hormone processing, peptide modification; HET: NAG; 2.10A {Homo sapiens}
Probab=97.55  E-value=0.00042  Score=43.14  Aligned_cols=89  Identities=11%  Similarity=-0.002  Sum_probs=56.9

Q ss_pred             CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCEEE
Q ss_conf             66437999861578877755189999838974356675056751352106761799996157785445448842886378
Q gi|254780160|r  122 NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIID  201 (298)
Q Consensus       122 ~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i~V~~g~~~~  201 (298)
                      ...++.....+..+.  |+.++.+.+   .+......++..|.+ ...|+||+|+|+.++- .+......|+|..++...
T Consensus       319 ~~~gi~G~V~d~~g~--pl~~A~V~v---~g~~~~~~Td~~G~f-~~~l~~G~y~l~vs~~-Gy~~~~~~v~v~~~~~~~  391 (439)
T 2nsm_A          319 VHQGIKGMVLDQNYN--NLANAVISV---SGINHDVTSGDHGDY-FRLLLPGIYTVSATAP-GYDPETVTVTVGPAEPTL  391 (439)
T ss_dssp             TSCSEEEEEECTTSC--BCTTCEEEE---TTEEEEEECCTTSEE-EECCCSEEEEEEEECT-TEECEEEEEEECSSSCEE
T ss_pred             HHCEEEEEEECCCCC--CCCCEEEEE---ECCCCCEEECCCCCE-EEEECCCCEEEEEEEE-CCCCEEEEEEECCCCEEE
T ss_conf             513358999877897--378549999---776166388899739-9983796279999995-733579999985898299


Q ss_pred             EEEEECCCEEEEEEEE
Q ss_conf             9999345238999983
Q gi|254780160|r  202 VTIQNRAAKITFKLVS  217 (298)
Q Consensus       202 ~tv~~~~~~~~~~~v~  217 (298)
                      +.+.+......+.-|.
T Consensus       392 ~~~~L~~~~~~l~~V~  407 (439)
T 2nsm_A          392 VNFHLKRSIPQVSPVR  407 (439)
T ss_dssp             CCEECEEC--------
T ss_pred             EEEEECCCCCCCCEEE
T ss_conf             9999822656563499


No 22 
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=97.46  E-value=0.00085  Score=41.18  Aligned_cols=49  Identities=18%  Similarity=0.192  Sum_probs=40.6

Q ss_pred             CCCCCCCCEEEEEECCCCCEE----EECCCCEEECCCCCEEEEEEEECCCCEEE
Q ss_conf             788632760899983899797----42125212124487028999953882467
Q gi|254780160|r  219 MGGEAVADTAWSILTASGDTV----GESANASPSMVLSEGDYTVIARNKERNYS  268 (298)
Q Consensus       219 ~~G~~l~ga~~~i~~~~g~~v----t~~~G~~~~~~L~~G~Y~v~a~~~~~~y~  268 (298)
                      .+..+|+|+.|.|++.+|.++    |+++|.|.+.+|++|+|+| +-..|.+|.
T Consensus       324 ~~e~~~~~~~~~l~~~~g~~~~~~tTd~~G~y~f~~l~~g~Y~v-e~~~P~gy~  376 (429)
T 3irp_X          324 DSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLV-EFVMPEGYI  376 (429)
T ss_dssp             CSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEE-EECCCTTEE
T ss_pred             CCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCEEE-EEECCCCCE
T ss_conf             88867486799999089989968997998769978768962799-998789987


No 23 
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=97.37  E-value=0.00049  Score=42.71  Aligned_cols=61  Identities=11%  Similarity=-0.043  Sum_probs=46.5

Q ss_pred             EEECCCCCCCCCEEEEEEECCCCC-E--EEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEE
Q ss_conf             861578877755189999838974-3--566750567513521067617999961577854454
Q gi|254780160|r  130 SIYKPGSPIVDDELTFSIYSNPNH-K--ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST  190 (298)
Q Consensus       130 ~~~~~~~~~~~~~~~f~i~~~~~~-~--~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~  190 (298)
                      .........+++++.|.++...+. .  ....++..|...+.+|..|+|+++|+++|.||.+..
T Consensus       166 ~~~~~~~~~~laga~F~l~~~~~~~~~~~~~~T~~~G~~~~~GL~~g~Y~l~EtkAP~GY~~~~  229 (262)
T 2x9z_A          166 VDATGAPIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADY  229 (262)
T ss_dssp             ECTTSCBCCCCSCEEEEEEETTTCCEEEEEEECTTCSEEEECSCCTTSCEEEEECCBTTBEEEE
T ss_pred             ECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCC
T ss_conf             0035643345564148999736881887899947844599832578888999997889854212


No 24 
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.23  E-value=0.0017  Score=39.31  Aligned_cols=79  Identities=14%  Similarity=-0.021  Sum_probs=52.7

Q ss_pred             CEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCEEEEE
Q ss_conf             43799986157887775518999983897435667505675135210676179999615778544544884288637899
Q gi|254780160|r  124 GGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVT  203 (298)
Q Consensus       124 g~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i~V~~g~~~~~t  203 (298)
                      ...+...+.+...+.|+.++.+.+   .+......++..|.+ ...|+||+|.|..++ +.+......|.|.+++.+.+.
T Consensus       300 ~~~i~G~V~d~~~~~pi~~A~v~i---~~~~~~~~td~~G~f-~~~l~~G~y~l~vs~-~Gy~~~~~~v~v~~~~~~~~~  374 (380)
T 1h8l_A          300 HRGIWGFVLDATDGRGILNATISV---ADINHPVTTYKDGDY-WRLLVQGTYKVTASA-RGYDPVTKTVEVDSKGGVQVN  374 (380)
T ss_dssp             GCEEEEEEEETTTCSBCTTCEEEE---TTEEEEEECCTTSEE-EECCCSEEEEEEEEC-TTBCCEEEEEEECSSCEEECC
T ss_pred             CCEEEEEEEECCCCCCCCCEEEEE---ECCCCCEEECCCCCE-EEECCCEEEEEEEEE-CCCCCEEEEEEEECCCEEEEE
T ss_conf             011899999899998768849999---436676488899858-996088379999998-360457999999089829999


Q ss_pred             EEEC
Q ss_conf             9934
Q gi|254780160|r  204 IQNR  207 (298)
Q Consensus       204 v~~~  207 (298)
                      +.+.
T Consensus       375 ~~L~  378 (380)
T 1h8l_A          375 FTLS  378 (380)
T ss_dssp             EEEC
T ss_pred             EEEC
T ss_conf             9974


No 25 
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=97.21  E-value=0.00049  Score=42.72  Aligned_cols=55  Identities=15%  Similarity=0.096  Sum_probs=42.0

Q ss_pred             CCCCCCCEEEEEEECCCCCEEEE-EEECCCCCEEEEECCCCEEEEEEECCCCCEEEE
Q ss_conf             88777551899998389743566-750567513521067617999961577854454
Q gi|254780160|r  135 GSPIVDDELTFSIYSNPNHKALL-ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST  190 (298)
Q Consensus       135 ~~~~~~~~~~f~i~~~~~~~~~~-~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~  190 (298)
                      +...++++++|.|+...+..... .++..|.+.+.+|++|.|+| |..+|.+|....
T Consensus       324 ~~e~~~~~~~~~l~~~~g~~~~~~tTd~~G~y~f~~l~~g~Y~v-e~~~P~gy~~t~  379 (429)
T 3irp_X          324 DSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLV-EFVMPEGYIPTQ  379 (429)
T ss_dssp             CSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEE-EECCCTTEEECC
T ss_pred             CCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCEEE-EEECCCCCEECC
T ss_conf             88867486799999089989968997998769978768962799-998789987717


No 26 
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.13  E-value=0.0015  Score=39.64  Aligned_cols=77  Identities=14%  Similarity=0.092  Sum_probs=54.8

Q ss_pred             EEEEEEECCCCCCCCCEEEEEECCCCC-EEEECCCCEEECCCCCEEEEEEEECCCCEE--EEEEEEE--ECCCCEEEEEE
Q ss_conf             899998347886327608999838997-974212521212448702899995388246--7779997--28850489997
Q gi|254780160|r  211 ITFKLVSEMGGEAVADTAWSILTASGD-TVGESANASPSMVLSEGDYTVIARNKERNY--SREFSVL--TGKSTIVEVLM  285 (298)
Q Consensus       211 ~~~~~v~~~~G~~l~ga~~~i~~~~g~-~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y--~~~ftV~--~g~~~~veV~~  285 (298)
                      ++-..|.+..|.||++|.+.|.+.+.. +.+..+|.|-. -|+||.|.|.++..++..  .+.+.|.  .+..+.+++++
T Consensus       338 Gi~G~V~d~~g~pi~~a~i~v~g~~~~~~~t~~~G~y~r-~l~pG~Y~v~~~a~GY~~~~~~~v~v~~~~~~~~~~~f~L  416 (435)
T 3mn8_A          338 GIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWR-LLTPGLYSVHASAFGYQTSAPQQVRVTNDNQEALRLDFKL  416 (435)
T ss_dssp             SEEEEEECSSSCBCTTCEEEETTCTTSCEECCTTCEEEE-CCCSEEEEEEEEBTTBCCCCCEEEEECCCSSSCEECCEEC
T ss_pred             CCEEEEECCCCCCCCCEEEEEECCCCCCEECCCCCCEEE-ECCCEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEE
T ss_conf             407999667899788749999655177116688972899-7178047999998175577715899965899618998897


Q ss_pred             ECH
Q ss_conf             410
Q gi|254780160|r  286 RQK  288 (298)
Q Consensus       286 ~~~  288 (298)
                      ...
T Consensus       417 ~p~  419 (435)
T 3mn8_A          417 APV  419 (435)
T ss_dssp             CBC
T ss_pred             ECC
T ss_conf             148


No 27 
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.03  E-value=0.0019  Score=38.87  Aligned_cols=65  Identities=8%  Similarity=-0.012  Sum_probs=47.2

Q ss_pred             EEEEEEECCCCCCCCCEEEEEECCCCCE--EEECCCCEEECCCCCEEEEEEEECCCCE-EEEEEEEEEC
Q ss_conf             8999983478863276089998389979--7421252121244870289999538824-6777999728
Q gi|254780160|r  211 ITFKLVSEMGGEAVADTAWSILTASGDT--VGESANASPSMVLSEGDYTVIARNKERN-YSREFSVLTG  276 (298)
Q Consensus       211 ~~~~~v~~~~G~~l~ga~~~i~~~~g~~--vt~~~G~~~~~~L~~G~Y~v~a~~~~~~-y~~~ftV~~g  276 (298)
                      ++-..|.+..|+||++|.+++.+.++.+  .+...|.|-. -|+||.|.+.++..++. ..+.++|..+
T Consensus       297 Gi~G~V~d~~g~pi~~A~i~v~~~~~~~~~~t~~~G~y~r-lL~pG~y~v~~sa~Gy~~~~~~v~v~~~  364 (426)
T 1uwy_A          297 GVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYL-LLLPGSYIINVTVPGHDPHITKVIIPEK  364 (426)
T ss_dssp             SEEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSCCEEEEEEECSS
T ss_pred             CCEEEEECCCCCCCCCEEEEEECCCCCCCEECCCCEEEEE-ECCCEEEEEEEEECCCCCEEEEEEECCC
T ss_conf             8559999689984786599993565631100288802999-8578068999998077652489997878


No 28 
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10
Probab=96.38  E-value=0.024  Score=31.81  Aligned_cols=75  Identities=15%  Similarity=0.097  Sum_probs=39.5

Q ss_pred             CCEEEEEEEECCCCCCCCCEEEEEECCCCC--EEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEE
Q ss_conf             523899998347886327608999838997--9742125212124487028999953882-4677799972885048999
Q gi|254780160|r  208 AAKITFKLVSEMGGEAVADTAWSILTASGD--TVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVL  284 (298)
Q Consensus       208 ~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~--~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~  284 (298)
                      .|.+..++.-.+.|.+   ..|.+.+.+-.  ..++++|.|.+.++.||+|++.+-.++. .++++++|.+|.+..+.+.
T Consensus       257 RG~V~G~~~l~~~g~~---~~~~~~~~~yQyWt~ad~~G~Fti~~VrpGtY~L~ay~~~~~~~~~~VtV~aG~~~~~~~~  333 (508)
T 1nkg_A          257 RGKVAGTASGADSSMD---WVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVTVSAGSTTTKNIS  333 (508)
T ss_dssp             CBEEEEEEESSCTTSC---EEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEEECTTCEEECCEE
T ss_pred             CCEEEEEEECCCCCCC---CEEEEECCCEEEEEEECCCCCEEECCCCCCEEEEEEEECCEEEEEEEEEECCCCCCCCCEE
T ss_conf             6079999971478887---4788733660789990688857707702660689999786288986799927976531157


Q ss_pred             E
Q ss_conf             7
Q gi|254780160|r  285 M  285 (298)
Q Consensus       285 ~  285 (298)
                      .
T Consensus       334 ~  334 (508)
T 1nkg_A          334 G  334 (508)
T ss_dssp             C
T ss_pred             E
T ss_conf             0


No 29 
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=96.12  E-value=0.019  Score=32.37  Aligned_cols=80  Identities=11%  Similarity=0.049  Sum_probs=46.0

Q ss_pred             CCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCC----
Q ss_conf             6437999861578877755189999838974356675056751352106761799996157785445448842886----
Q gi|254780160|r  123 AGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGK----  198 (298)
Q Consensus       123 ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i~V~~g~----  198 (298)
                      ..|+.....+..+.+++  +|.+.+-.-  ......++...+...--|+||+|.|..++ +.+.+....++|..+.    
T Consensus       295 ~~Gi~G~V~d~~g~pi~--~A~i~v~~~--~~~~~~~t~~~G~y~rlL~pG~y~v~~sa-~Gy~~~~~~v~v~~~~~~~~  369 (426)
T 1uwy_A          295 HLGVKGQVFDQNGNPLP--NVIVEVQDR--KHICPYRTNKYGEYYLLLLPGSYIINVTV-PGHDPHITKVIIPEKSQNFS  369 (426)
T ss_dssp             GCSEEEEEECTTSCBCC--SCEEEETTC--CCSSCCBCCTTCEEEECCCSEEEEEEEEC-SSSCCEEEEEEECSSCSSSS
T ss_pred             HCCCEEEEECCCCCCCC--CEEEEEECC--CCCCCEECCCCEEEEEECCCEEEEEEEEE-CCCCCEEEEEEECCCCCCCC
T ss_conf             45855999968998478--659999356--56311002888029998578068999998-07765248999787875453


Q ss_pred             EEEEEEEEC
Q ss_conf             378999934
Q gi|254780160|r  199 IIDVTIQNR  207 (298)
Q Consensus       199 ~~~~tv~~~  207 (298)
                      .+...+.+.
T Consensus       370 ~~~~df~l~  378 (426)
T 1uwy_A          370 ALKKDILLP  378 (426)
T ss_dssp             CEECCEECS
T ss_pred             EEEEEEEEC
T ss_conf             057748964


No 30 
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=94.87  E-value=0.16  Score=26.51  Aligned_cols=65  Identities=20%  Similarity=0.363  Sum_probs=32.1

Q ss_pred             CCCCCCCCCE--EEEEECCCC-----CEEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEEEE
Q ss_conf             4788632760--899983899-----79742125212124487028999953882-467779997288504899974
Q gi|254780160|r  218 EMGGEAVADT--AWSILTASG-----DTVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVLMR  286 (298)
Q Consensus       218 ~~~G~~l~ga--~~~i~~~~g-----~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~~~  286 (298)
                      +..|+|++||  .|+|+|-..     ...||+.|..++. .-.|+--+.|.++++ ++.+   +..|++..+++.++
T Consensus         9 d~~G~PV~gA~V~FkvyNYAEfy~va~~~TD~~G~a~lt-~G~Gdmlv~A~k~g~~g~~k---~~~~k~~~~~l~L~   81 (82)
T 3e8v_A            9 DAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFGYSK---LSFGKDNELKITLD   81 (82)
T ss_dssp             CTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEEEEE---EEETTBCEEEEECC
T ss_pred             CCCCCCCCCCEEEEEEECHHHEEEEEEEEECCCCEEEEE-ECCCCEEEEEECCCEEEEEE---EEECCCCEEEEEEC
T ss_conf             589999899999999960275267201288788609999-55875999998599989999---86078845999945


No 31 
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.3.7.1
Probab=94.76  E-value=0.054  Score=29.49  Aligned_cols=45  Identities=9%  Similarity=0.079  Sum_probs=22.3

Q ss_pred             EEEECCCCEEECCCCCEEEEEEEEC-------CCC-----EEEEEEEEEECCCCEEE
Q ss_conf             9742125212124487028999953-------882-----46777999728850489
Q gi|254780160|r  238 TVGESANASPSMVLSEGDYTVIARN-------KER-----NYSREFSVLTGKSTIVE  282 (298)
Q Consensus       238 ~vt~~~G~~~~~~L~~G~Y~v~a~~-------~~~-----~y~~~ftV~~g~~~~ve  282 (298)
                      ..+|..|.|.+.+||+|+|.+++.-       +..     ...+.++|+.|++..|.
T Consensus       111 T~~D~~GrF~F~~Lp~G~Yyl~a~v~w~~~~~g~~~~qgg~lmkrVtv~ggqt~~v~  167 (170)
T 1xpn_A          111 ATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVL  167 (170)
T ss_dssp             EEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEECCSSCEEEE
T ss_pred             EEECCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEE
T ss_conf             786587608765789964899998875245788987344179999996599389988


No 32 
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.3.7.1
Probab=93.24  E-value=0.22  Score=25.52  Aligned_cols=50  Identities=16%  Similarity=0.158  Sum_probs=31.0

Q ss_pred             EEEEEECCCCCEEEEECCCCEEEEEEE---C-CCCCEE------EEEEEECCCCEEEEEE
Q ss_conf             566750567513521067617999961---5-778544------5448842886378999
Q gi|254780160|r  155 ALLITDKVRSGTLVRLGTNNYQITSHY---G-KYNAIV------STVVKVEPGKIIDVTI  204 (298)
Q Consensus       155 ~~~~t~~~~~~~~~~L~~G~Y~v~et~---a-~~~~~~------~~~i~V~~g~~~~~tv  204 (298)
                      ....+|+.|.+.+.+||+|.|+|....   + +.+...      -.-|+|..|++.++++
T Consensus       109 r~T~~D~~GrF~F~~Lp~G~Yyl~a~v~w~~~~~g~~~~qgg~lmkrVtv~ggqt~~v~L  168 (170)
T 1xpn_A          109 REATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLL  168 (170)
T ss_dssp             EEEEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEECCSSCEEEEE
T ss_pred             EEEEECCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf             267865876087657899648999988752457889873441799999965993899884


No 33 
>1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1
Probab=90.10  E-value=0.72  Score=22.25  Aligned_cols=129  Identities=12%  Similarity=0.130  Sum_probs=60.9

Q ss_pred             CCEEEEEEECCCCCCCEEEEEEECCCC-EEEECCCC---C---EEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEE
Q ss_conf             675999995388876205889824685-66302267---2---1899996157775278998068613678751366437
Q gi|254780160|r   54 SGVSWHIFDSISNKKNTLSTTKKIIGG-KVSFDLFP---G---DYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGI  126 (298)
Q Consensus        54 ~G~~~~vy~~~~~~~g~~~~tt~~~G~-~~~~~L~p---G---~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~~~ag~~  126 (298)
                      +-+.++||.. ....+... ++.+++- ..+.+||-   |   .|.|.+...+ ++...+.   + .............+
T Consensus        23 ~si~v~L~~n-g~~~~~~~-~~~~~~w~~tf~~Lpk~d~G~~i~Y~V~E~~v~-gY~~~v~---g-~~itnt~~~~~~~i   95 (187)
T 1d2o_A           23 EKVSVNLLAN-GEKVKTLD-VTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVK-DYTTDIN---G-TTITNKYTPGETSA   95 (187)
T ss_dssp             SEEEEEEEET-TEEEEEEE-EEGGGTTEEEEEEEESEETTEECCEEEEECCCT-TEEEEEE---T-TEEEEEECTTEEEE
T ss_pred             CEEEEEEEEC-CEECCEEE-ECCCCCCEEEECCCCCCCCCCEEEEEEEEECCC-CCEEEEC---C-EEEEECCCCCCEEE
T ss_conf             7699999879-91922088-547898489985650137998699999971469-8262303---3-58982123210004


Q ss_pred             EEEEEECCCC---CCCCCEEEEEEECCCCCEEEE-EEECCC--CCEEEEECCC------CEEEEEEECCCCCEEE
Q ss_conf             9998615788---777551899998389743566-750567--5135210676------1799996157785445
Q gi|254780160|r  127 RLYSIYKPGS---PIVDDELTFSIYSNPNHKALL-ITDKVR--SGTLVRLGTN------NYQITSHYGKYNAIVS  189 (298)
Q Consensus       127 ~~~~~~~~~~---~~~~~~~~f~i~~~~~~~~~~-~t~~~~--~~~~~~L~~G------~Y~v~et~a~~~~~~~  189 (298)
                      .+.++-.++.   ...+..++|.||.++...... .....+  ...+.+||..      .|+|+|...|.||..+
T Consensus        96 ~v~K~W~d~~~~~~~rP~~i~v~L~~~g~~~~~~~~l~~~~~W~~~f~~Lp~~~~G~~i~Y~V~E~~~~~GY~~~  170 (187)
T 1d2o_A           96 TVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTH  170 (187)
T ss_dssp             EEEEEEESSTTSSSCCCSCEEEEEEETTEEEEEEEEESGGGTTEEEEEEEESEETTEECCEEEEECSCCTTEEEE
T ss_pred             EEEEECCCCCCCCCCCCCCEEEEEEECCEEECEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEE
T ss_conf             667523589876676887489999989877020899717896799977876347997899999994679995999


No 34 
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=88.81  E-value=0.89  Score=21.63  Aligned_cols=63  Identities=17%  Similarity=0.231  Sum_probs=43.3

Q ss_pred             CCCCCCEEEEEECCCCCE---EEECCCCEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCEEEEE
Q ss_conf             863276089998389979---7421252121244870289999538824677799972885048999
Q gi|254780160|r  221 GEAVADTAWSILTASGDT---VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVL  284 (298)
Q Consensus       221 G~~l~ga~~~i~~~~g~~---vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~~ftV~~g~~~~veV~  284 (298)
                      .+-++||.+.|...+..+   ++|.-|-|.+..|..|.|.+.++..++.+... .+.-++...+-.+
T Consensus       207 ~~~~~~a~~~l~~~~~~~~~~~~d~fg~f~~~~~~~g~y~~~i~~~g~~~~~~-~~~~~~s~~~g~~  272 (274)
T 1ti6_B          207 GDCFEGAKVVLKSGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGKSYSDT-VVIDDKSVDLGFI  272 (274)
T ss_dssp             TEECTTCEEEEEETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTEEEEEE-EEESSSCEEEEEE
T ss_pred             CCCCCCCEEEECCCCCEEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCEEE-EEECCCCCEECCE
T ss_conf             34017702477169978767225786664765634750699997278760467-8852788504305


No 35 
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-sandwich, mixed alpha/beta structure; 1.8A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=87.09  E-value=1.1  Score=20.96  Aligned_cols=59  Identities=10%  Similarity=0.026  Sum_probs=43.6

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC-----------------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             023279999986887753467599999538887-----------------62058898246856630226721899
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK-----------------KNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~-----------------~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      .++.|.++.++.+..+.++.|+...|+..+.+.                 .+.=...|+++|.+.+.-+.||.|..
T Consensus        75 ~Ge~i~v~GrV~D~~g~Pv~~A~VEIWQada~G~Y~~~~d~~~~~~d~~f~g~Gr~~TD~~G~y~F~TI~PG~Yp~  150 (241)
T 2bum_B           75 IGERVIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW  150 (241)
T ss_dssp             SSCEEEEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred             CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC
T ss_conf             8787999999988999896886799985689961578766555667887552389996999869999847843168


No 36 
>3pcg_M Protocatechuate 3,4-dioxygenase; iron, nonheme, metalloprotein, oxidoreductase; HET: 4HP; 1.96A {Pseudomonas putida} SCOP: b.3.6.1 PDB: 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 1ykp_B* 1yko_B* 3pcd_M 1ykn_B* 1ykm_B* 1ykk_B* 1ykl_B*
Probab=83.95  E-value=1.6  Score=20.00  Aligned_cols=59  Identities=12%  Similarity=0.074  Sum_probs=43.3

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCC-----------------CEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             0232799999868877534675999995388876-----------------2058898246856630226721899
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKK-----------------NTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~-----------------g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      .++.|.++.++.+..+.++.|+...|+..+....                 +.=...|+++|.+.+.-+.||.|-.
T Consensus        74 ~G~~i~v~GrV~D~~g~Pv~~A~VEiWQada~G~Y~~~~d~~~~~~d~~f~~rGr~~Td~~G~y~F~TI~PG~Yp~  149 (238)
T 3pcg_M           74 IGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPW  149 (238)
T ss_dssp             SSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred             CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCC
T ss_conf             8557999999985999882886799986799954268666656666877322799970899819999958866457


No 37 
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=83.80  E-value=1.6  Score=19.96  Aligned_cols=224  Identities=15%  Similarity=0.119  Sum_probs=102.5

Q ss_pred             CCEEEEEEEE-CCCCCCCCCC--EEEEEEECCCCCCCEEEEEEECCCCEEE-ECC----CCCEEEEEEEECC-CCCEEEE
Q ss_conf             2327999998-6887753467--5999995388876205889824685663-022----6721899996157-7752789
Q gi|254780160|r   36 AQRITCEARL-TENSTSIDSG--VSWHIFDSISNKKNTLSTTKKIIGGKVS-FDL----FPGDYLISASFGH-VGVVKKI  106 (298)
Q Consensus        36 ~~~i~l~a~~-~~~~~~~~~G--~~~~vy~~~~~~~g~~~~tt~~~G~~~~-~~L----~pG~Y~v~~s~g~-~~~~~~v  106 (298)
                      ++.+.+.+.. ..+..++.++  +.+.|+++.+....+...+++..|.+.. |.|    +.|.|.|.+.+.. ....+.+
T Consensus       114 GqtV~~r~~~~~~~~~p~~~~~~v~v~i~dp~G~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~~tI~v~~~~~~~~s~~F  193 (1325)
T 2pn5_A          114 GDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTF  193 (1325)
T ss_dssp             TCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEE
T ss_pred             CCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEE
T ss_conf             98999999999998860788933899999899989999996618998899986889998871179999989996999999


Q ss_pred             EEECCCCEEEEEEE------CCCC---EEEEEEEECCCCCCCCCEEEEEEECCCCC-EE--EEEEECCCCCEEE----EE
Q ss_conf             98068613678751------3664---37999861578877755189999838974-35--6675056751352----10
Q gi|254780160|r  107 TVSSKEKNQKQVFI------LNAG---GIRLYSIYKPGSPIVDDELTFSIYSNPNH-KA--LLITDKVRSGTLV----RL  170 (298)
Q Consensus       107 tV~~~~~~~~~~~~------~~ag---~~~~~~~~~~~~~~~~~~~~f~i~~~~~~-~~--~~~t~~~~~~~~~----~L  170 (298)
                      .|..=..-..++.+      ...+   .+.+.+..-.|.+..+ .+.+.++..+.. ..  ....++.+...+.    .+
T Consensus       194 ~VeeyvlP~feV~i~~~~~~~~~~~~i~~~v~A~Y~~G~PV~G-~~~v~~~~~~~~~~~~~~~~~dg~g~~~~~~~~~~~  272 (1325)
T 2pn5_A          194 EVKEYVLSTFDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQG-VAKVELYLDDDKLKLKKELTVYGKGQVELRFDNFAM  272 (1325)
T ss_dssp             EECCSCCCCEEEEEEESSCCBGGGCEEEEEEEEEESSSCBCEE-EEEEEEEETTTTEEEEEEEEEESEEEEEEECSSCCC
T ss_pred             EEEEEECCCEEEEEECCCEEECCCCEEEEEEEEEECCCCCEEE-EEEEEEEECCCCEEECCEEEEEEEEEEEEECCCCCC
T ss_conf             9999778958999966867706899699999999789981887-999999994784483338976117999997474344


Q ss_pred             CCC--CEEEEEEE--CCCCCEEEE--EEEECCCCEEEEEEEEC------C--CEEEEEEEECCCCCCCCCEEEEEECCCC
Q ss_conf             676--17999961--577854454--48842886378999934------5--2389999834788632760899983899
Q gi|254780160|r  171 GTN--NYQITSHY--GKYNAIVST--VVKVEPGKIIDVTIQNR------A--AKITFKLVSEMGGEAVADTAWSILTASG  236 (298)
Q Consensus       171 ~~G--~Y~v~et~--a~~~~~~~~--~i~V~~g~~~~~tv~~~------~--~~~~~~~v~~~~G~~l~ga~~~i~~~~g  236 (298)
                      .+.  .|++..+.  ...+.....  .+.+.... ..+.+...      .  ..+.+.+ ....|+|+++..+.+.....
T Consensus       273 ~~~~~~~~v~~~v~e~~tg~~~~~~~~v~v~~~~-~~i~~~~~~~~~~pg~~~~~~v~v-~~~dG~P~~~~~v~v~~~~~  350 (1325)
T 2pn5_A          273 DADQQDVPVKVSFVEQYTNRTVVKQSQITVYRYA-YRVELIKESPQFRPGLPFKCALQF-THHDGTPAKGISGKVEVSDV  350 (1325)
T ss_dssp             SSSEEEEEEEEEEEETTTCCEEEEEEEEEEESSS-CEEEEEESSSSBCTTSCEEEEEEE-ECTTSCBCTTCEEEEEEGGG
T ss_pred             CCCCCEEEEEEEEEECCCCEEEEEEEEEEEEECC-EEEEEEECCCEECCCCCEEEEEEE-ECCCCCCCCCCEEEEEEEEE
T ss_conf             6777379999999996799599999999987044-599999588806699908999999-97999997674379999401


Q ss_pred             C----EEEECCCCEEE-CCCCCEEEEEEEEC
Q ss_conf             7----97421252121-24487028999953
Q gi|254780160|r  237 D----TVGESANASPS-MVLSEGDYTVIARN  262 (298)
Q Consensus       237 ~----~vt~~~G~~~~-~~L~~G~Y~v~a~~  262 (298)
                      .    ..++.+|.+.. ..+++|.|.+....
T Consensus       351 ~~~~~~~~d~~G~~~~~i~~~~g~~~l~~~~  381 (1325)
T 2pn5_A          351 RFETTTTSDNDGLIKLELQPSEGTEQLSIHF  381 (1325)
T ss_dssp             TEEEEEECCTTSEEEEEECCCTTCCEEEEEE
T ss_pred             EEEEEEEECCCEEEEEEEECCCCCEEEEEEE
T ss_conf             7999999714568999998998877999999


No 38 
>1s9a_A Pyrocatechase, chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGP TAM; 2.47A {Rhodococcus opacus} SCOP: b.3.6.1
Probab=83.51  E-value=1.7  Score=19.88  Aligned_cols=59  Identities=14%  Similarity=0.115  Sum_probs=36.3

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC-------------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             023279999986887753467599999538887-------------62058898246856630226721899
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK-------------KNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~-------------~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      .++.+.++.++.+..+.++.||...|+..+...             .++=...|+++|.+.+.-+.||.|.+
T Consensus       100 ~G~~l~v~G~V~D~~g~Pv~~A~veiWqad~~G~Y~~~~~~~~~~~~~rG~~~Td~dG~y~f~Ti~P~~Y~i  171 (257)
T 1s9a_A          100 PGDRMRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEI  171 (257)
T ss_dssp             SSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCTTSCTTSCSSCCSEEEECCCTTSEEEEEEECCCCEEC
T ss_pred             CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC
T ss_conf             987899999999799988378589999759997314657776656567204887899729999978766677


No 39 
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=80.95  E-value=2.1  Score=19.28  Aligned_cols=59  Identities=12%  Similarity=0.145  Sum_probs=37.5

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC-----------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             023279999986887753467599999538887-----------62058898246856630226721899
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK-----------KNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~-----------~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      .++.+.++.+..+..++++.||...|+..+...           .++=...|+++|.+.+.-+.|+-|.+
T Consensus       130 ~G~~l~v~G~V~D~~G~Pi~gA~veiWqad~~G~Y~~~~~~~~~~~rGr~~Td~dG~y~f~Ti~P~~Y~i  199 (293)
T 1tmx_A          130 AGEPCWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI  199 (293)
T ss_dssp             CSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC
T ss_pred             CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC
T ss_conf             9888999999988998996781789985289983445767988666458877899848999984457678


No 40 
>3pcg_A Protocatechuate 3,4-dioxygenase; iron, nonheme, metalloprotein, oxidoreductase; HET: 4HP; 1.96A {Pseudomonas putida} SCOP: b.3.6.1 PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 3pca_A* 3pcb_A* 1ykk_A* 3pcd_A 3pce_A* 3pcf_A* 3pcc_A* 3pch_A* 3pci_A* 3pcj_A* 3pck_A* 3pcl_A* 3pcm_A* 3pcn_A*
Probab=80.62  E-value=2.1  Score=19.21  Aligned_cols=58  Identities=10%  Similarity=0.052  Sum_probs=38.2

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCC-------------EEEEEEECCCCEEEECCCCCEEE
Q ss_conf             02327999998688775346759999953888762-------------05889824685663022672189
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKN-------------TLSTTKKIIGGKVSFDLFPGDYL   92 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g-------------~~~~tt~~~G~~~~~~L~pG~Y~   92 (298)
                      .++.|.|+.++.+....++.|+...|+..+.....             .-..+++++|.+.+.-+.||-|.
T Consensus        45 ~G~~i~v~G~V~D~~g~Pi~~a~veiWqad~~G~Y~~~~~~~~~~~~~~g~~~td~~G~y~f~Ti~Pg~Y~  115 (200)
T 3pcg_A           45 PGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVN  115 (200)
T ss_dssp             SSCEEEEEEEEECTTSCBCTTCEEEEECCCTTSCCCCBCCTTSSBCSEEEEECCSSSCEEEEEEECCCCCB
T ss_pred             CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCC
T ss_conf             78889999999768998759818999853899625256776334577655576089987999962780215


No 41 
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=80.19  E-value=2.2  Score=19.12  Aligned_cols=199  Identities=15%  Similarity=0.154  Sum_probs=86.8

Q ss_pred             ECCCCEEEE--CCCCCEEEEEEEECCCC---CEEEEEEECCCCE--EE-------EEEECCCCEEEEEEEECCCCCCCC-
Q ss_conf             246856630--22672189999615777---5278998068613--67-------875136643799986157887775-
Q gi|254780160|r   76 KIIGGKVSF--DLFPGDYLISASFGHVG---VVKKITVSSKEKN--QK-------QVFILNAGGIRLYSIYKPGSPIVD-  140 (298)
Q Consensus        76 ~~~G~~~~~--~L~pG~Y~v~~s~g~~~---~~~~vtV~~~~~~--~~-------~~~~~~ag~~~~~~~~~~~~~~~~-  140 (298)
                      +.+|.+...  -..+|.|.|++.++...   ..-.+.+......  ..       .........+.+..++..+..... 
T Consensus        62 ~~dGty~v~ytp~~~G~y~i~V~~~g~~i~~sp~~v~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~D~~gn~~~~~  141 (311)
T 1wlh_A           62 NGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDG  141 (311)
T ss_dssp             CSSSEEEEEECCCSCSEEEEEEEESSSBCTTCSEEEEEECCBCTTTCCEESGGGTCEESSSCEEEEEECBBSSSSBCSSC
T ss_pred             CCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEEEECCCCEECCC
T ss_conf             99967999982266740788999899350368731235788874057761566413761883689999760457362149


Q ss_pred             -CEEEEEEECCCCCEEE-EEEEC-CCCCEE--EEECCCCEEEEEEECCCCCEEEE--EEEECCCCEEE-EEEEECCCEEE
Q ss_conf             -5189999838974356-67505-675135--21067617999961577854454--48842886378-99993452389
Q gi|254780160|r  141 -DELTFSIYSNPNHKAL-LITDK-VRSGTL--VRLGTNNYQITSHYGKYNAIVST--VVKVEPGKIID-VTIQNRAAKIT  212 (298)
Q Consensus       141 -~~~~f~i~~~~~~~~~-~~t~~-~~~~~~--~~L~~G~Y~v~et~a~~~~~~~~--~i~V~~g~~~~-~tv~~~~~~~~  212 (298)
                       ..+...+....+.... .+.+. +|.+.+  .-..+|.|.|..++.... +...  .++|..+.... ..+  ......
T Consensus       142 ~~~~~v~v~~p~g~~~~~~v~d~~dGty~v~~~p~~~G~y~v~V~~~g~~-v~gSPf~v~V~~~~~~~~~~~--~~~~~~  218 (311)
T 1wlh_A          142 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNP-IKNMPIDVKCIEGANGEDSSF--GSFTFT  218 (311)
T ss_dssp             CCCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETTEE-CTTCSCEEEEECCCCGGGCEE--EEEEEE
T ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEECCEE-CCCCCEEEEEECCCCCCCCCC--CCCEEE
T ss_conf             97179999968999987799999999799999646571189999989998-899998999964887554200--352003


Q ss_pred             EEEEECCCCCC----CCCEEEEEECCCCCE----EEECCCCEEEC--CCCCEEEEEEEECCCCEE-EEEEEEEECCC
Q ss_conf             99983478863----276089998389979----74212521212--448702899995388246-77799972885
Q gi|254780160|r  213 FKLVSEMGGEA----VADTAWSILTASGDT----VGESANASPSM--VLSEGDYTVIARNKERNY-SREFSVLTGKS  278 (298)
Q Consensus       213 ~~~v~~~~G~~----l~ga~~~i~~~~g~~----vt~~~G~~~~~--~L~~G~Y~v~a~~~~~~y-~~~ftV~~g~~  278 (298)
                      ....+.. +..    -....+.+..+++.+    +...+|.|...  --.+|+|.+.++.++..- -.+|+|..+..
T Consensus       219 v~~~~~~-~~~~~~g~~~l~v~v~~p~~~~~~~~~d~~dG~y~v~ytp~~~G~y~v~V~~~g~~V~gSPF~v~v~~~  294 (311)
T 1wlh_A          219 VAAKNKK-GEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGNP  294 (311)
T ss_dssp             EECBCTT-SSBCSSCCSCEEEEEESCCSEEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTEECTTCSEEEEESCT
T ss_pred             EECCCCE-EEECCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECCCCCEEEEECCC
T ss_conf             6535622-542237898179999689987313899899998999998889988999999999999997979897899


No 42 
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=80.05  E-value=2.2  Score=19.09  Aligned_cols=58  Identities=10%  Similarity=0.067  Sum_probs=36.7

Q ss_pred             CCEEEEEEEECCCCCCCCCCEEEEEEECCCC------------CCCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             2327999998688775346759999953888------------762058898246856630226721899
Q gi|254780160|r   36 AQRITCEARLTENSTSIDSGVSWHIFDSISN------------KKNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        36 ~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~------------~~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      +.-+.|+.++.+..+.++.|+...|+..+..            -.++=...|+++|.+.+.-+.||.|-+
T Consensus       129 G~pl~l~G~V~D~~g~Pi~gA~vdiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~f~Ti~P~~Y~i  198 (280)
T 3hhy_A          129 ITPLVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQI  198 (280)
T ss_dssp             SCEEEEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred             CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC
T ss_conf             5579999999889999978848999844899974566888877663789975899549999973677788


No 43 
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=79.57  E-value=2.3  Score=18.99  Aligned_cols=59  Identities=14%  Similarity=0.030  Sum_probs=40.5

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC------------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             023279999986887753467599999538887------------62058898246856630226721899
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK------------KNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~------------~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      ++.-+.|+.++.+..+.++.|+...|+..+...            .++-...|+++|.+.+.-+.||-|.+
T Consensus       126 ~G~pl~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~Td~~G~y~f~Ti~P~~Y~i  196 (290)
T 3n9t_A          126 DGVPALVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI  196 (290)
T ss_dssp             CSCEEEEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred             CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCC
T ss_conf             98579999999889999957827899954899877887888888886668861899709999994144456


No 44 
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxidoreductase; HET: PCF; 2.65A {Pseudomonas putida}
Probab=79.28  E-value=2.3  Score=18.93  Aligned_cols=58  Identities=7%  Similarity=0.074  Sum_probs=39.9

Q ss_pred             CCEEEEEEEECCCCCCCCCCEEEEEEECCCCC------------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             23279999986887753467599999538887------------62058898246856630226721899
Q gi|254780160|r   36 AQRITCEARLTENSTSIDSGVSWHIFDSISNK------------KNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        36 ~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~------------~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      +..+.++.++.+..+.++.|+...|+..+...            .++=...|+++|.+.+.-+.||.|.+
T Consensus       130 G~~l~v~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~Ti~P~~Y~i  199 (311)
T 2azq_A          130 GVVMFLQGQVFDANGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGC  199 (311)
T ss_dssp             CCEEEEEEEEECSSSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEEC
T ss_pred             CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCC
T ss_conf             8779999999989998977857889955899976777788889888442723899828999998505468


No 45 
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=78.75  E-value=2.4  Score=18.83  Aligned_cols=47  Identities=19%  Similarity=0.259  Sum_probs=26.6

Q ss_pred             EEEEECCCCCEE------EECCC----CEEE-CCCCCEEEEEEEECC-CCEEEEEEEEE
Q ss_conf             899983899797------42125----2121-244870289999538-82467779997
Q gi|254780160|r  228 AWSILTASGDTV------GESAN----ASPS-MVLSEGDYTVIARNK-ERNYSREFSVL  274 (298)
Q Consensus       228 ~~~i~~~~g~~v------t~~~G----~~~~-~~L~~G~Y~v~a~~~-~~~y~~~ftV~  274 (298)
                      .+.|.+++|..+      ....|    .|.+ ..++.|.|++.+... +...+..|.|+
T Consensus        39 ~v~i~~p~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~~~~~~~~F~Ve   97 (102)
T 2p9r_A           39 LVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHPFTVE   97 (102)
T ss_dssp             EEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred             EEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEE
T ss_conf             69999999989995885617797799999999876717699999978997899999998


No 46 
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 1f41_A 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=77.34  E-value=2.7  Score=18.57  Aligned_cols=43  Identities=16%  Similarity=0.223  Sum_probs=17.9

Q ss_pred             CCCEEEEEEECCCCCCC--EEEEEEECCCCEEEE----CCCCCEEEEEE
Q ss_conf             46759999953888762--058898246856630----22672189999
Q gi|254780160|r   53 DSGVSWHIFDSISNKKN--TLSTTKKIIGGKVSF----DLFPGDYLISA   95 (298)
Q Consensus        53 ~~G~~~~vy~~~~~~~g--~~~~tt~~~G~~~~~----~L~pG~Y~v~~   95 (298)
                      -+|+..+||....+..-  -....|+++|....+    .+.+|.|.|.-
T Consensus        16 A~gv~V~L~~~~~~~~~~~i~~~~Td~dGRi~~~~~~~~~~~G~YeL~F   64 (115)
T 1f86_A           16 AINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEI   64 (115)
T ss_dssp             CTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf             7899999999899998589999995899831687775657773199999


No 47 
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=77.23  E-value=2.6  Score=18.63  Aligned_cols=54  Identities=11%  Similarity=0.017  Sum_probs=25.6

Q ss_pred             EEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEE-----ECCCCCEEEEEE
Q ss_conf             799999868877534675999995388876205889824685663-----022672189999
Q gi|254780160|r   39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVS-----FDLFPGDYLISA   95 (298)
Q Consensus        39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~-----~~L~pG~Y~v~~   95 (298)
                      |+-+...+..+.+ .+|+..+||.....  .-....|+++|....     .++.+|.|.+.-
T Consensus        11 iSTHVLDt~~G~P-A~gv~V~L~~~~~~--~~~~~~Td~dGR~~~~~~~~~~~~~G~Y~l~F   69 (121)
T 2h0e_A           11 LTTHILDLTCGKP-AANVKIGLKRLGES--IMKEVYTNNDGRVDVPLLAGEELMSGEYVMEF   69 (121)
T ss_dssp             EECCEEETTTTEE-CTTCEEEEEETTSC--CCEEEECCTTSSCSSCSEEGGGCCSEEEEEEE
T ss_pred             CEEEEECCCCCCC-CCCCEEEEEECCCC--EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf             3365733888893-78998999987884--08899966998999676787665656899998


No 48 
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsv_A*
Probab=75.37  E-value=3  Score=18.23  Aligned_cols=59  Identities=15%  Similarity=0.188  Sum_probs=35.9

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCC------------CCCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             02327999998688775346759999953888------------762058898246856630226721899
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISN------------KKNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~------------~~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      .++.+.++.++.+..+.++.|+...|+..+..            -.++=...|+++|.+.+.-+.||.|.+
T Consensus       133 ~G~~l~v~G~V~D~~G~Pi~gA~veiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~Ti~P~~Y~i  203 (312)
T 2xsu_A          133 KVDTLIIEGTVTDTEGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGC  203 (312)
T ss_dssp             TSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred             CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC
T ss_conf             86569999999889999858807999826999753677878899887447961899859999967566577


No 49 
>2v5m_A Dscam; neurobiology SPL, immunoglobulin domain, cell adhesion, membrane, developmental protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=73.33  E-value=3.4  Score=17.91  Aligned_cols=53  Identities=19%  Similarity=0.396  Sum_probs=30.8

Q ss_pred             CCCCCCEEEEEECCCCCEEEECCCCEEECCCC---CEEEEEEEECCCCEEEEEEEEEEC
Q ss_conf             86327608999838997974212521212448---702899995388246777999728
Q gi|254780160|r  221 GEAVADTAWSILTASGDTVGESANASPSMVLS---EGDYTVIARNKERNYSREFSVLTG  276 (298)
Q Consensus       221 G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~---~G~Y~v~a~~~~~~y~~~ftV~~g  276 (298)
                      |.|.+...|..   +|..+....+.+.+..+.   .|.|+.+|+|..-..+..+.|+.|
T Consensus       333 g~P~p~i~W~k---~g~~l~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~l~V~  388 (388)
T 2v5m_A          333 GNPIKTVSWMK---DGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLG  388 (388)
T ss_dssp             EECCCEEEEEE---TTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred             EECCCEEEEEE---CCEECCCCCCEEEECCCCHHHCEEEEEEEEECCCEEEEEEEEEEC
T ss_conf             85699899999---999946999989999998670999999999689679999999989


No 50 
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=70.61  E-value=3.9  Score=17.51  Aligned_cols=12  Identities=17%  Similarity=0.318  Sum_probs=5.7

Q ss_pred             EECCCCEEEEEE
Q ss_conf             106761799996
Q gi|254780160|r  169 RLGTNNYQITSH  180 (298)
Q Consensus       169 ~L~~G~Y~v~et  180 (298)
                      .|.+|+|+|++.
T Consensus        94 ~~~~GtYYi~V~  105 (119)
T 1nqj_A           94 KLRPGKYYLLVY  105 (119)
T ss_dssp             EECSEEEEEEEE
T ss_pred             ECCCCEEEEEEE
T ss_conf             558988999999


No 51 
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta fold, metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=68.60  E-value=4.3  Score=17.24  Aligned_cols=58  Identities=9%  Similarity=0.060  Sum_probs=37.3

Q ss_pred             CCEEEEEEEECCCCCCCCCCEEEEEEECCCCC--------------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             23279999986887753467599999538887--------------62058898246856630226721899
Q gi|254780160|r   36 AQRITCEARLTENSTSIDSGVSWHIFDSISNK--------------KNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        36 ~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~--------------~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      ++.+.++.++.+..+.++.|+...|+..+...              .++=...|+++|.+.+.-+.|+.|-+
T Consensus       131 G~~l~v~G~V~D~~G~Pv~gA~veiWqad~~G~Y~~~~~~~~~~~~~~rG~~~Td~~G~y~f~Ti~P~~Y~i  202 (311)
T 1dmh_A          131 GHTLILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC  202 (311)
T ss_dssp             CCEEEEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred             CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC
T ss_conf             868999999998999998897788875499932567777777776675438931899849999978666677


No 52 
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=68.56  E-value=4.3  Score=17.23  Aligned_cols=64  Identities=20%  Similarity=0.197  Sum_probs=40.7

Q ss_pred             CEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEE--ECCCCCEEEEEEEECCCCC
Q ss_conf             32799999868877534675999995388876205889824685663--0226721899996157775
Q gi|254780160|r   37 QRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVS--FDLFPGDYLISASFGHVGV  102 (298)
Q Consensus        37 ~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~--~~L~pG~Y~v~~s~g~~~~  102 (298)
                      ..++|++++.+++ .++.|.... |....+.......+++++|.+..  ....+|..+|.+.......
T Consensus        19 d~~tlTvtv~d~g-npv~g~~V~-~ss~~g~~~~~~~~Td~~G~at~tlts~~~G~~tVTA~v~~~~~   84 (282)
T 1f00_I           19 DAITYTVKVMKGD-KPVSNQEVT-FTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSDVAV   84 (282)
T ss_dssp             CCEEEEEEEEETT-EECTTCEEE-EEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETTCCC
T ss_pred             EEEEEEEEEEECC-CCCCCCEEE-EEECCCCEECCEEEECCCCEEEEEEEECCEEEEEEEEEECCCCC
T ss_conf             1799999997399-587998899-99789812032268779986999998032447999999867520


No 53 
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=64.27  E-value=5.1  Score=16.70  Aligned_cols=56  Identities=11%  Similarity=0.106  Sum_probs=25.7

Q ss_pred             EEEEEEECCCCCCCCCCEEEEEEECCCCCCCE--EEEEEECCCCEEEE----CCCCCEEEEEE
Q ss_conf             79999986887753467599999538887620--58898246856630----22672189999
Q gi|254780160|r   39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNT--LSTTKKIIGGKVSF----DLFPGDYLISA   95 (298)
Q Consensus        39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~--~~~tt~~~G~~~~~----~L~pG~Y~v~~   95 (298)
                      |+.+...+..|.+ -+|+..+||....+....  ....|+++|....+    ++++|.|.|.-
T Consensus         4 IStHVLDt~~G~P-A~gv~V~L~~~~~~~~~~~i~~~~Td~dGRi~~l~~~~~~~~G~Y~L~F   65 (119)
T 1oo2_A            4 LMVKILDAVKGTP-AGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEF   65 (119)
T ss_dssp             EEEEEEETTTTEE-CTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEE
T ss_pred             CEEEEECCCCCCC-CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf             3186804898885-7899899999889998289999987899868675674546780199999


No 54 
>3gf8_A Putative polysaccharide binding proteins (DUF1812); NP_809975.1, structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=63.22  E-value=5.4  Score=16.58  Aligned_cols=20  Identities=25%  Similarity=0.285  Sum_probs=15.0

Q ss_pred             EEECCCCCEEEEEEEECCCC
Q ss_conf             63022672189999615777
Q gi|254780160|r   82 VSFDLFPGDYLISASFGHVG  101 (298)
Q Consensus        82 ~~~~L~pG~Y~v~~s~g~~~  101 (298)
                      ...+||||+|.+.+=.|..+
T Consensus        68 m~l~l~~G~Y~~VaWgg~~~   87 (296)
T 3gf8_A           68 MEVELPVGQYQFMAWAGARD   87 (296)
T ss_dssp             EEECCCSEEEEEEEEESCCT
T ss_pred             EEECCCCCCEEEEEEECCCC
T ss_conf             34047997489999988888


No 55 
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=62.96  E-value=5.4  Score=16.55  Aligned_cols=46  Identities=24%  Similarity=0.289  Sum_probs=26.8

Q ss_pred             CCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEE
Q ss_conf             2267218999961577752789980686136787513664379998
Q gi|254780160|r   85 DLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYS  130 (298)
Q Consensus        85 ~L~pG~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~~~ag~~~~~~  130 (298)
                      .+.||+|.||+.+|-.-+..=.++..++.......+.-+++-.+..
T Consensus         2 ~f~pGD~VVH~~hGIG~y~GL~~~~~~g~~~e~l~leYa~~dkL~V   47 (71)
T 3mlq_E            2 PHMPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYKGEGKLYL   47 (71)
T ss_dssp             --------------CEEEEEEEEEEETTEEEEEEEEEETTTEEEEE
T ss_pred             CCCCCCEEEEECCCEEEEEEEEEECCCCCCCEEEEEEECCCCEEEE
T ss_conf             7699989887078829981008860389142699999879998998


No 56 
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=61.47  E-value=5.8  Score=16.38  Aligned_cols=59  Identities=8%  Similarity=0.061  Sum_probs=40.2

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC------------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             023279999986887753467599999538887------------62058898246856630226721899
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK------------KNTLSTTKKIIGGKVSFDLFPGDYLI   93 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~------------~g~~~~tt~~~G~~~~~~L~pG~Y~v   93 (298)
                      .++.+.++.++.+..+.++.||...|+..+...            .++=...|+++|.+.+.-+.||.|.+
T Consensus        99 ~G~~l~v~G~V~D~~g~Pv~~A~veiWqad~~G~Y~~~~~~~~~~~~rG~~~TD~~G~y~f~Ti~P~~Y~i  169 (254)
T 2boy_A           99 SGDTLIFRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI  169 (254)
T ss_dssp             CSCEEEEEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred             CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEC
T ss_conf             99789999999989998989957899633898037104777877577417865899859999982364322


No 57 
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyneuropathy, transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=61.45  E-value=5.8  Score=16.37  Aligned_cols=56  Identities=13%  Similarity=0.179  Sum_probs=24.5

Q ss_pred             EEEEEEECCCCCCCCCCEEEEEEECCCCCC--CEEEEEEECCCCEEEE----CCCCCEEEEEE
Q ss_conf             799999868877534675999995388876--2058898246856630----22672189999
Q gi|254780160|r   39 ITCEARLTENSTSIDSGVSWHIFDSISNKK--NTLSTTKKIIGGKVSF----DLFPGDYLISA   95 (298)
Q Consensus        39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~--g~~~~tt~~~G~~~~~----~L~pG~Y~v~~   95 (298)
                      |+.+...+..+.+ -+|+..+||....+..  --....|+++|....+    .+.+|.|.|.-
T Consensus        12 IStHVLDt~~G~P-A~gv~V~L~~~~~~~~~~~i~~~~Td~dGRi~~~~~~~~~~~G~YeL~F   73 (127)
T 2h4e_A           12 LMVKVLDAVRGSP-AINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEI   73 (127)
T ss_dssp             EEEEEEETTTTEE-CTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEE
T ss_pred             EEEEEECCCCCCC-CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf             0787821898876-8899999998789998689889984899846886586767765599999


No 58 
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-sandwich, mixed alpha/beta structure; 1.8A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=60.94  E-value=5.9  Score=16.32  Aligned_cols=58  Identities=17%  Similarity=0.015  Sum_probs=37.0

Q ss_pred             ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCC-----------------CEE-EEEEECCCCEEEECCCCCEEE
Q ss_conf             0232799999868877534675999995388876-----------------205-889824685663022672189
Q gi|254780160|r   35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKK-----------------NTL-STTKKIIGGKVSFDLFPGDYL   92 (298)
Q Consensus        35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~-----------------g~~-~~tt~~~G~~~~~~L~pG~Y~   92 (298)
                      .++.+.|..++.+....++.|+...|+..+....                 +.. ..+++++|...+.-+.||.|.
T Consensus        49 ~G~~i~l~G~V~D~~g~Pv~~a~VeiWqad~~G~Y~~~~~~~~~~~~~~~~~~~~~~~td~~G~y~f~Ti~Pg~Y~  124 (209)
T 2bum_A           49 QGQRIRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVP  124 (209)
T ss_dssp             CSCEEEEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCB
T ss_pred             CCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCC
T ss_conf             8987999999988999898997899981699987456555656666877411688886589976999974661556


No 59 
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown function; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=60.72  E-value=6  Score=16.29  Aligned_cols=56  Identities=13%  Similarity=0.090  Sum_probs=22.5

Q ss_pred             EEEEEEECCCCCCCCCCEEEEEEECCCCCCCEE-EEEEECCCCEEE----ECCCCCEEEEEE
Q ss_conf             799999868877534675999995388876205-889824685663----022672189999
Q gi|254780160|r   39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTL-STTKKIIGGKVS----FDLFPGDYLISA   95 (298)
Q Consensus        39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~-~~tt~~~G~~~~----~~L~pG~Y~v~~   95 (298)
                      |+.+...+..+.| -+|+..+||....+.--.+ ...|+++|....    ..+.+|.|.|.-
T Consensus         6 iStHVLDt~~G~P-A~gv~V~L~~~~~~~~~~i~~~~Td~dGR~~~l~~~~~~~~G~YeL~F   66 (114)
T 2g2n_A            6 LSVHILNQQTGKP-AADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVF   66 (114)
T ss_dssp             EEEEEEETTTTEE-CCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEE
T ss_pred             EEEEEECCCCCCC-CCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf             4587743899894-799989999967998499778888899988663476656552399999


No 60 
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=53.90  E-value=6.5  Score=16.03  Aligned_cols=12  Identities=8%  Similarity=0.288  Sum_probs=8.2

Q ss_pred             EECCCCEEEEEE
Q ss_conf             106761799996
Q gi|254780160|r  169 RLGTNNYQITSH  180 (298)
Q Consensus       169 ~L~~G~Y~v~et  180 (298)
                      +|++|.|-|+..
T Consensus       126 ~l~~G~YLlR~E  137 (208)
T 3eja_A          126 CIKSGYYLLRAE  137 (208)
T ss_dssp             SBCSEEEEEEEE
T ss_pred             CCCCCCEEEEEE
T ss_conf             889975388763


No 61 
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=51.14  E-value=8.5  Score=15.29  Aligned_cols=15  Identities=13%  Similarity=0.310  Sum_probs=9.5

Q ss_pred             CCCCEEEEEEEECCC
Q ss_conf             267218999961577
Q gi|254780160|r   86 LFPGDYLISASFGHV  100 (298)
Q Consensus        86 L~pG~Y~v~~s~g~~  100 (298)
                      -.+|.|.|.+.++..
T Consensus        77 ~~~G~y~i~V~~~G~   91 (212)
T 1qfh_A           77 PVEGNYNVNVTLRGN   91 (212)
T ss_dssp             CSSEEEEEEEEETTE
T ss_pred             CCCEEEEEEEEECCE
T ss_conf             778869999999999


No 62 
>2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens}
Probab=49.80  E-value=8.9  Score=15.15  Aligned_cols=34  Identities=9%  Similarity=0.058  Sum_probs=15.4

Q ss_pred             CCCCCEEEEEEEECCCCEEEEEEEEEECCCCEEE
Q ss_conf             2448702899995388246777999728850489
Q gi|254780160|r  249 MVLSEGDYTVIARNKERNYSREFSVLTGKSTIVE  282 (298)
Q Consensus       249 ~~L~~G~Y~v~a~~~~~~y~~~ftV~~g~~~~ve  282 (298)
                      ..|+||.|.|+..--...-+.+|.+..=.+.+++
T Consensus       110 ~~l~pG~Y~IIPsT~~pg~~g~F~LrV~S~~~~~  143 (148)
T 2qfe_A          110 ENIPSGIFNIIPSTFLPKQEGPFFLDFNSIIPIK  143 (148)
T ss_dssp             EEECSEEEEEEEEESSTTCCEEEEEEEEESSCCE
T ss_pred             EECCCCCEEEEEECCCCCCCCCEEEEEEECCCCE
T ss_conf             8739956899987247997208899999799958


No 63 
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 2h6u_A 2h1x_A
Probab=48.82  E-value=9.2  Score=15.06  Aligned_cols=56  Identities=5%  Similarity=0.015  Sum_probs=21.6

Q ss_pred             EEEEEEECCCCCCCCCCEEEEEEECCCCCCCE---EEEEEECCCCEEEE----CCCCCEEEEEE
Q ss_conf             79999986887753467599999538887620---58898246856630----22672189999
Q gi|254780160|r   39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNT---LSTTKKIIGGKVSF----DLFPGDYLISA   95 (298)
Q Consensus        39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~---~~~tt~~~G~~~~~----~L~pG~Y~v~~   95 (298)
                      |+.+...+..+.| -+|+..+||...+.....   ....|+++|....+    ++.+|.|.|.-
T Consensus        28 LStHVLDt~~G~P-Aagv~V~L~~~~~~~~~~~~i~~~~Td~dGR~~~l~~~~~~~~G~YeL~F   90 (138)
T 3iwv_A           28 LSTHVLNIAQGVP-GANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRF   90 (138)
T ss_dssp             EECCEEETTTTEE-CTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEE
T ss_pred             CEEEEECCCCCCC-CCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf             2477823898766-89998999997689996589889984899984876674557772099999


No 64 
>3d33_A Domain of unknown function with AN immunoglobulin-like beta-sandwich fold; YP_001297618.1; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=48.37  E-value=9.4  Score=15.01  Aligned_cols=53  Identities=13%  Similarity=0.115  Sum_probs=30.4

Q ss_pred             CCCCCEEEEEECC-CCCEEEE-----CCC---CEEECCCCCEEEEEEEECCC-CEEEEEEEEE
Q ss_conf             6327608999838-9979742-----125---21212448702899995388-2467779997
Q gi|254780160|r  222 EAVADTAWSILTA-SGDTVGE-----SAN---ASPSMVLSEGDYTVIARNKE-RNYSREFSVL  274 (298)
Q Consensus       222 ~~l~ga~~~i~~~-~g~~vt~-----~~G---~~~~~~L~~G~Y~v~a~~~~-~~y~~~ftV~  274 (298)
                      +++.+..++|.+. .|.+|..     ..+   .+.+.+++.|+|.+.-.++. .-..-.|+++
T Consensus        46 ~~~~~vtItI~~~~tG~vVY~~~~~~~~~~~i~I~L~~~~~G~Y~Lei~~~~g~~l~G~F~le  108 (108)
T 3d33_A           46 SPDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTPSGHLTGYFTKE  108 (108)
T ss_dssp             SCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEESSCEEEEEEEEC
T ss_pred             CCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEC
T ss_conf             789966999998988979999863278874899723576365289999858887999999979


No 65 
>1zdv_A Outer membrane usher protein FIMD; beta sheet, alpha helix, membrane protein; NMR {Escherichia coli} SCOP: b.167.1.1
Probab=46.50  E-value=10  Score=14.83  Aligned_cols=14  Identities=29%  Similarity=0.619  Sum_probs=7.7

Q ss_pred             CCCCCEEEEEEEEC
Q ss_conf             22672189999615
Q gi|254780160|r   85 DLFPGDYLISASFG   98 (298)
Q Consensus        85 ~L~pG~Y~v~~s~g   98 (298)
                      .|+||+|.|..--.
T Consensus         3 ~i~PG~Y~vdI~vN   16 (115)
T 1zdv_A            3 ELPPGTYRVDIYLN   16 (115)
T ss_dssp             CCCCSCEEEEEEET
T ss_pred             CCCCCEEEEEEEEC
T ss_conf             67991718999999


No 66 
>3o6u_A Uncharacterized protein CPE2226; structural genomics, protein structure initiative, NESG, CPR 2; 2.50A {Clostridium perfringens}
Probab=42.27  E-value=12  Score=14.41  Aligned_cols=36  Identities=19%  Similarity=0.307  Sum_probs=23.5

Q ss_pred             ECCCCEEEEEEEC-CCCCEEEEEEEECCCCEEEEEEE
Q ss_conf             0676179999615-77854454488428863789999
Q gi|254780160|r  170 LGTNNYQITSHYG-KYNAIVSTVVKVEPGKIIDVTIQ  205 (298)
Q Consensus       170 L~~G~Y~v~et~a-~~~~~~~~~i~V~~g~~~~~tv~  205 (298)
                      |+-|+|+...... ..++.+...++|+.|+++.+.+.
T Consensus         2 lkDGtY~~~~~~~~~~G~~~~v~vtVkdGKI~~v~~~   38 (128)
T 3o6u_A            2 LKDGDYTVETAKADDHGYKAKLSIKVSDGKITEAKYN   38 (128)
T ss_dssp             CCSEEEEEEESSCCTTSEEEEEEEEESSSSEEEEEEE
T ss_pred             CCCCEEEEEEECCCCCCCEEEEEEEEECCEEEEEEEE
T ss_conf             7893599998745677976999999989969999997


No 67 
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=41.42  E-value=12  Score=14.33  Aligned_cols=23  Identities=17%  Similarity=0.231  Sum_probs=12.5

Q ss_pred             ECCCCCEEEEEE---EECCCCEEEEE
Q ss_conf             124487028999---95388246777
Q gi|254780160|r  248 SMVLSEGDYTVI---ARNKERNYSRE  270 (298)
Q Consensus       248 ~~~L~~G~Y~v~---a~~~~~~y~~~  270 (298)
                      ...|++|+|++.   ...|++..+-.
T Consensus        73 ~~~l~~G~YtV~wr~vs~DGH~~~G~   98 (104)
T 1lyq_A           73 REPLPAGTYRVDWRAVSSDTHPITGN   98 (104)
T ss_dssp             SSCCCSEEEEEEEEECCTTSCCEEEE
T ss_pred             CCCCCCCEEEEEEEEEECCCCEECCE
T ss_conf             87789824999999995589886257


No 68 
>2j3s_A Filamin-A; acetylation, polymorphism, cytoskeleton, disease mutation, actin-binding, phosphorylation, immunoglobulin like, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=39.54  E-value=13  Score=14.14  Aligned_cols=186  Identities=17%  Similarity=0.208  Sum_probs=79.2

Q ss_pred             EEEEEECCCCEEEE--CCCCCEEEEEEEECCCCC---EEEEEEECCCCEEEEEEECC-------CCE---EEEEEEECCC
Q ss_conf             58898246856630--226721899996157775---27899806861367875136-------643---7999861578
Q gi|254780160|r   71 LSTTKKIIGGKVSF--DLFPGDYLISASFGHVGV---VKKITVSSKEKNQKQVFILN-------AGG---IRLYSIYKPG  135 (298)
Q Consensus        71 ~~~tt~~~G~~~~~--~L~pG~Y~v~~s~g~~~~---~~~vtV~~~~~~~~~~~~~~-------ag~---~~~~~~~~~~  135 (298)
                      ..++-..+|.+...  --.+|.|.|++.++....   .-.+.+..............       ++.   ..+.....  
T Consensus        51 ~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g~~i~gsPf~v~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~--  128 (288)
T 2j3s_A           51 INTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRRRRAPSVANVGSHCDLSLKIPEI--  128 (288)
T ss_dssp             EEEEECTTSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEEEESCCSEEEEEEEEECCCCCCSCCSSCCC---------
T ss_pred             EEEEECCCCEEEEEEEECCCEEEEEEEEECCEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCC--
T ss_conf             699989999899999938975799999999987048872999507876663046025577631027508999972778--


Q ss_pred             CCCCCCEEEEEEECCCCCEE-EEEEEC-CCCCEE--EEECCCCEEEEEEECCCCCEEEEE--EEECC-------------
Q ss_conf             87775518999983897435-667505-675135--210676179999615778544544--88428-------------
Q gi|254780160|r  136 SPIVDDELTFSIYSNPNHKA-LLITDK-VRSGTL--VRLGTNNYQITSHYGKYNAIVSTV--VKVEP-------------  196 (298)
Q Consensus       136 ~~~~~~~~~f~i~~~~~~~~-~~~t~~-~~~~~~--~~L~~G~Y~v~et~a~~~~~~~~~--i~V~~-------------  196 (298)
                         ....+...+...++... ..+.+. ++.+.+  .-..+|.|.|..+++... +...+  ++|..             
T Consensus       129 ---~~~~~~~~~~~p~g~~~~~~v~d~~dGty~v~~~p~~~G~y~v~V~~~g~~-i~~SP~~~~V~~~~~~~~~~~~~~G  204 (288)
T 2j3s_A          129 ---SIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQH-VPGSPFQFTVGPLGEGGAHKVRAGG  204 (288)
T ss_dssp             ----CCCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEETTEE-CTTCSEEEEESCCCCCCGGGCEEES
T ss_pred             ---CCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCEE-CCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf             ---888607999769995884589989998899999965266689999999998-8899752113655456420368851


Q ss_pred             --------CCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEE---ECCCCEEEC--CCCCEEEEEEEECC
Q ss_conf             --------86378999934523899998347886327608999838997974---212521212--44870289999538
Q gi|254780160|r  197 --------GKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG---ESANASPSM--VLSEGDYTVIARNK  263 (298)
Q Consensus       197 --------g~~~~~tv~~~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt---~~~G~~~~~--~L~~G~Y~v~a~~~  263 (298)
                              |+..++++..+.          .++..   -.+.+..+++..++   ..+|.|...  -..+|+|.+.++.+
T Consensus       205 ~g~~~~~~g~~~~f~V~~~~----------aG~~~---l~v~v~gp~~~~v~~~d~~dG~y~v~y~p~~~G~y~v~V~~~  271 (288)
T 2j3s_A          205 PGLERAEAGVPAEFSIWTRE----------AGAGG---LAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFN  271 (288)
T ss_dssp             GGGTCEETTBCEEEEEECCB----------SSSEE---EEEEEEESSCEEEEEEECTTSEEEEEEEESSCEEEEEEEEET
T ss_pred             CCCCCCEECCCCEEEEEECC----------CCCCC---EEEEEECCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEEC
T ss_conf             57554124165389999366----------89983---599997999975689989999899999878988899999999


Q ss_pred             CCEE-EEEEEEEE
Q ss_conf             8246-77799972
Q gi|254780160|r  264 ERNY-SREFSVLT  275 (298)
Q Consensus       264 ~~~y-~~~ftV~~  275 (298)
                      +..- -.+|.|..
T Consensus       272 g~~i~gSPf~v~V  284 (288)
T 2j3s_A          272 EEHIPDSPFVVPV  284 (288)
T ss_dssp             TEECTTCSEEEEE
T ss_pred             CEECCCCCEEEEE
T ss_conf             9999998908796


No 69 
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=37.68  E-value=14  Score=13.96  Aligned_cols=74  Identities=18%  Similarity=0.246  Sum_probs=45.8

Q ss_pred             CEEEEEEEECCCCCCC----CCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEE--ECCC----CCEEEE
Q ss_conf             3279999986887753----46759999953888762058898246856630226721899996--1577----752789
Q gi|254780160|r   37 QRITCEARLTENSTSI----DSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISAS--FGHV----GVVKKI  106 (298)
Q Consensus        37 ~~i~l~a~~~~~~~~~----~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s--~g~~----~~~~~v  106 (298)
                      +.-.|+.++.+.+.++    ..|+.+++|...-+...........+|.+ ...|-.|+|.+...  .+|.    ..+..+
T Consensus         9 P~s~~~G~i~~tgE~i~~~~~~gv~i~l~e~gy~~~~~~~~~~~~DGtf-~~~lF~G~Ykl~~~~~ngP~~~~~~dtI~v   87 (215)
T 3hn5_A            9 PESMLTGRVMYNGEALQLRGNEAVQLQLYQHGYAKHDPINVYVNQDGMY-SANLFDGEYQMITKSGNGPWTSEGRDTINV   87 (215)
T ss_dssp             -CEEEEEEEEETTEECCCCCTTSCEEEEESSCGGGCCCEEEEBCTTSEE-EEEECSEEEEEEECTTCSSBCSTTCCCEEE
T ss_pred             CCCEEEEEEEECCCEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCE-EEEEECCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf             8745789998899771120688349999974557789768897589857-643766516899736887874577737999


Q ss_pred             EEECC
Q ss_conf             98068
Q gi|254780160|r  107 TVSSK  111 (298)
Q Consensus       107 tV~~~  111 (298)
                      ++.+.
T Consensus        88 ~i~G~   92 (215)
T 3hn5_A           88 TVAGN   92 (215)
T ss_dssp             EESSS
T ss_pred             EECCC
T ss_conf             91884


No 70 
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=35.44  E-value=15  Score=13.73  Aligned_cols=16  Identities=19%  Similarity=0.088  Sum_probs=12.3

Q ss_pred             CCCCCEEEEEEEECCC
Q ss_conf             2267218999961577
Q gi|254780160|r   85 DLFPGDYLISASFGHV  100 (298)
Q Consensus        85 ~L~pG~Y~v~~s~g~~  100 (298)
                      .||||+|.|.+-.|..
T Consensus        71 ~l~~G~Y~~VAWgg~~   86 (314)
T 3pay_A           71 ELDFGSYKVLTVGSLS   86 (314)
T ss_dssp             TCCSEEEEEEEEESCC
T ss_pred             CCCCCCEEEEEEECCC
T ss_conf             7899858999996888


No 71 
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=31.99  E-value=17  Score=13.37  Aligned_cols=28  Identities=14%  Similarity=0.044  Sum_probs=18.9

Q ss_pred             ECCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             1244870289999538824677799972
Q gi|254780160|r  248 SMVLSEGDYTVIARNKERNYSREFSVLT  275 (298)
Q Consensus       248 ~~~L~~G~Y~v~a~~~~~~y~~~ftV~~  275 (298)
                      ...|.+|||.|+..+.--.|..-.++..
T Consensus       477 ~~~L~~GDyVVH~dHGIGrY~GL~~i~v  504 (1151)
T 2eyq_A          477 LAELHIGQPVVHLEHGVGRYAGMTTLEA  504 (1151)
T ss_dssp             CTTCCTTCEEEETTTEEEEEEEEEEEES
T ss_pred             HHHCCCCCHHHHCCCCEEEEECCEEECC
T ss_conf             2206788711320676489713257403


No 72 
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=29.03  E-value=19  Score=13.05  Aligned_cols=24  Identities=21%  Similarity=0.290  Sum_probs=10.0

Q ss_pred             CEEEEEEEECCCCEE-EEEEEEEEC
Q ss_conf             702899995388246-777999728
Q gi|254780160|r  253 EGDYTVIARNKERNY-SREFSVLTG  276 (298)
Q Consensus       253 ~G~Y~v~a~~~~~~y-~~~ftV~~g  276 (298)
                      +|.|.+..+.++... -.+|.|..+
T Consensus        66 ~G~h~v~V~~~g~~IpgSPf~v~V~   90 (102)
T 2dlg_A           66 MGVHTVSVKYRGQHVTGSPFQFTVG   90 (102)
T ss_dssp             TCEEEEEEESSSSBCSSCSEEEEBC
T ss_pred             CCEEEEEEEECCEECCCCCEEEEEE
T ss_conf             6279999999999989989898984


No 73 
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.88  E-value=21  Score=12.81  Aligned_cols=11  Identities=36%  Similarity=0.299  Sum_probs=5.1

Q ss_pred             ECCCCCEEEEE
Q ss_conf             12448702899
Q gi|254780160|r  248 SMVLSEGDYTV  258 (298)
Q Consensus       248 ~~~L~~G~Y~v  258 (298)
                      +..|.+|.|+|
T Consensus        74 ~s~~~~G~Y~f   84 (113)
T 2e7m_A           74 LSQLSVGLYVF   84 (113)
T ss_dssp             ECSCCSEEEEE
T ss_pred             EEECCCCEEEE
T ss_conf             74045756999


No 74 
>2kzx_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Clostridium thermocellum}
Probab=26.65  E-value=21  Score=12.78  Aligned_cols=37  Identities=16%  Similarity=0.194  Sum_probs=22.2

Q ss_pred             ECCCCEEEEEEEC-CCCCEEEEEEEECCCCEEEEEEEE
Q ss_conf             0676179999615-778544544884288637899993
Q gi|254780160|r  170 LGTNNYQITSHYG-KYNAIVSTVVKVEPGKIIDVTIQN  206 (298)
Q Consensus       170 L~~G~Y~v~et~a-~~~~~~~~~i~V~~g~~~~~tv~~  206 (298)
                      |.-|+|+...... ..++.....|+|..|+++.+.+..
T Consensus         1 lkDGtY~~~~~~~d~~g~~~~V~vtV~dgkIt~v~~~~   38 (131)
T 2kzx_A            1 MKDGTYYAEADDFDESGWKDTVTIEVKNGKIVSVDWNA   38 (131)
T ss_dssp             CCSSEEEEECSSCCTTSEEEEEEEEEETTEEEEEEEEE
T ss_pred             CCCCEEEEEEEECCCCCCEEEEEEEEECCEEEEEEEEE
T ss_conf             99838999998237888569999999899999999998


No 75 
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} PDB: 3jqx_A
Probab=22.86  E-value=24  Score=12.33  Aligned_cols=12  Identities=17%  Similarity=0.019  Sum_probs=5.5

Q ss_pred             EECCCCEEEEEE
Q ss_conf             106761799996
Q gi|254780160|r  169 RLGTNNYQITSH  180 (298)
Q Consensus       169 ~L~~G~Y~v~et  180 (298)
                      .|++|+|+|++.
T Consensus        91 ~~~~G~Yyl~V~  102 (121)
T 3jqw_A           91 ADKPGRYYIHLY  102 (121)
T ss_dssp             ECSCEEEEEEEE
T ss_pred             CCCCEEEEEEEE
T ss_conf             068804999999


No 76 
>2inu_A Inulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=22.70  E-value=25  Score=12.31  Aligned_cols=10  Identities=40%  Similarity=0.723  Sum_probs=4.6

Q ss_pred             ECCCCCEEEE
Q ss_conf             0226721899
Q gi|254780160|r   84 FDLFPGDYLI   93 (298)
Q Consensus        84 ~~L~pG~Y~v   93 (298)
                      .-||||+|.+
T Consensus        60 V~ip~GtY~i   69 (410)
T 2inu_A           60 IIIPPGDYDL   69 (410)
T ss_dssp             EECCSEEEEE
T ss_pred             EEECCCEEEE
T ss_conf             9999975895


No 77 
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=21.75  E-value=26  Score=12.19  Aligned_cols=18  Identities=17%  Similarity=0.209  Sum_probs=9.5

Q ss_pred             CCEEEEECCCC-EEEEEEE
Q ss_conf             51352106761-7999961
Q gi|254780160|r  164 SGTLVRLGTNN-YQITSHY  181 (298)
Q Consensus       164 ~~~~~~L~~G~-Y~v~et~  181 (298)
                      ...+.+|.||+ |.|.+..
T Consensus       159 ~~~v~~L~pgt~Y~~~V~A  177 (197)
T 3lpw_A          159 EATITGLIQGEEYSFRVSA  177 (197)
T ss_dssp             EEEECCCCTTCEEEEEEEE
T ss_pred             EEEECCCCCCCEEEEEEEE
T ss_conf             7998998899989999999


No 78 
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=21.65  E-value=26  Score=12.17  Aligned_cols=27  Identities=11%  Similarity=0.233  Sum_probs=12.1

Q ss_pred             CCEEEEEEEECCCCEE-EEEEEEEECCC
Q ss_conf             8702899995388246-77799972885
Q gi|254780160|r  252 SEGDYTVIARNKERNY-SREFSVLTGKS  278 (298)
Q Consensus       252 ~~G~Y~v~a~~~~~~y-~~~ftV~~g~~  278 (298)
                      .+|.|.+..+.++... -.+|.|.....
T Consensus        75 ~~G~h~i~V~~~g~~I~gSPf~v~V~~~  102 (112)
T 2d7p_A           75 ENGVHSIDVKFNGAHIPGSPFKIRVGEQ  102 (112)
T ss_dssp             SCEEEEEEEEESSCBCTTCSEEEEECCC
T ss_pred             CCCCEEEEEEECCEECCCCCEEEEEECC
T ss_conf             6732899999999999998989898065


No 79 
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal domain; usher, N-terminal domain, ternary complex with chaperone and pilus subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli K12} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=21.05  E-value=27  Score=12.09  Aligned_cols=12  Identities=33%  Similarity=0.656  Sum_probs=5.8

Q ss_pred             CCCCCEEEEEEE
Q ss_conf             226721899996
Q gi|254780160|r   85 DLFPGDYLISAS   96 (298)
Q Consensus        85 ~L~pG~Y~v~~s   96 (298)
                      .++||.|.|..-
T Consensus        27 ~~~PG~Y~vdiy   38 (125)
T 3bwu_D           27 ELPPGTYRVDIY   38 (125)
T ss_dssp             SSCSEEEEEEEE
T ss_pred             CCCCEEEEEEEE
T ss_conf             869848799999


No 80 
>2bcm_B F1845 fimbrial protein; DAAE adhesin, donor strand complementation, cell adhesion; 1.48A {Escherichia coli}
Probab=20.40  E-value=27  Score=12.01  Aligned_cols=13  Identities=15%  Similarity=0.220  Sum_probs=8.4

Q ss_pred             EEECCCCEEEEEE
Q ss_conf             2106761799996
Q gi|254780160|r  168 VRLGTNNYQITSH  180 (298)
Q Consensus       168 ~~L~~G~Y~v~et  180 (298)
                      ...|+|.|++.-.
T Consensus       121 t~~ptG~YTLnL~  133 (165)
T 2bcm_B          121 TDKPTGEYTLNLT  133 (165)
T ss_dssp             TTSCSEEEEEEEE
T ss_pred             CCCCCCCEEEEEC
T ss_conf             4688852799942


Done!