Query gi|254780160|ref|YP_003064573.1| hypothetical protein CLIBASIA_00215 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 298 No_of_seqs 193 out of 319 Neff 8.3 Searched_HMMs 23785 Date Sun May 22 21:34:03 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780160.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 3kpt_A Collagen adhesion prote 99.8 1.8E-16 7.7E-21 123.1 20.0 248 38-288 9-353 (355) 2 2pz4_A Protein GBS052; SPAB, G 99.6 9.5E-15 4E-19 112.0 15.0 162 46-207 25-229 (239) 3 2pz4_A Protein GBS052; SPAB, G 99.6 1.3E-14 5.3E-19 111.2 12.3 155 137-293 29-234 (239) 4 3hr6_A SPAA, putative surface- 99.1 3.2E-08 1.4E-12 69.8 19.8 84 209-292 307-435 (436) 5 2ww8_A RRGA, cell WALL surface 99.0 1.5E-09 6.5E-14 78.3 8.5 81 207-287 734-837 (893) 6 2ww8_A RRGA, cell WALL surface 99.0 5.4E-08 2.3E-12 68.3 16.1 75 40-115 49-128 (893) 7 2x9x_A RRGB, cell WALL surface 98.9 2E-10 8.6E-15 84.0 1.7 146 136-282 175-421 (444) 8 2x5p_A FBA2, fibronectin bindi 98.9 1.4E-08 6E-13 72.1 10.6 93 122-217 26-120 (121) 9 2x5p_A FBA2, fibronectin bindi 98.8 3.5E-08 1.5E-12 69.6 9.9 87 193-280 11-102 (121) 10 2xi9_A Ancillary protein 1; ce 98.8 3.4E-08 1.4E-12 69.6 8.8 77 35-113 23-103 (457) 11 2xi9_A Ancillary protein 1; ce 98.7 3.7E-08 1.5E-12 69.4 7.6 81 122-202 23-106 (457) 12 1d2p_A Collagen adhesin, CNA; 98.7 8.4E-06 3.5E-10 54.2 19.3 213 51-272 110-359 (373) 13 1d2p_A Collagen adhesin, CNA; 98.5 6.4E-05 2.7E-09 48.4 22.7 203 53-263 22-259 (373) 14 1h8l_A Carboxypeptidase GP180 98.5 4.4E-07 1.8E-11 62.5 7.6 79 208-287 300-379 (380) 15 3kpt_A Collagen adhesion prote 98.4 1.2E-06 4.9E-11 59.7 7.6 85 122-207 249-353 (355) 16 2nsm_A Carboxypeptidase N cata 98.2 3.7E-06 1.6E-10 56.4 6.7 78 209-288 321-399 (439) 17 2x9x_A RRGB, cell WALL surface 97.9 1.1E-07 4.7E-12 66.3 -6.0 145 52-198 178-416 (444) 18 1cwv_A Invasin; integrin-bindi 97.8 0.0018 7.4E-08 39.1 15.7 226 38-266 27-288 (492) 19 2x9z_A RRGB, cell WALL surface 97.7 0.00015 6.2E-09 46.1 7.8 54 218-271 170-229 (262) 20 3hr6_A SPAA, putative surface- 97.6 0.00012 5.2E-09 46.6 6.5 57 47-103 28-111 (436) 21 2nsm_A Carboxypeptidase N cata 97.5 0.00042 1.8E-08 43.1 8.5 89 122-217 319-407 (439) 22 3irp_X URO-adherence factor A; 97.5 0.00085 3.6E-08 41.2 9.1 49 219-268 324-376 (429) 23 2x9z_A RRGB, cell WALL surface 97.4 0.00049 2.1E-08 42.7 7.0 61 130-190 166-229 (262) 24 1h8l_A Carboxypeptidase GP180 97.2 0.0017 6.9E-08 39.3 8.4 79 124-207 300-378 (380) 25 3irp_X URO-adherence factor A; 97.2 0.00049 2.1E-08 42.7 5.5 55 135-190 324-379 (429) 26 3mn8_A LP15968P; catalytic dom 97.1 0.0015 6.2E-08 39.6 7.3 77 211-288 338-419 (435) 27 1uwy_A Carboxypeptidase M; met 97.0 0.0019 8.1E-08 38.9 7.1 65 211-276 297-364 (426) 28 1nkg_A Rhamnogalacturonase B; 96.4 0.024 1E-06 31.8 8.8 75 208-285 257-334 (508) 29 1uwy_A Carboxypeptidase M; met 96.1 0.019 8.2E-07 32.4 7.3 80 123-207 295-378 (426) 30 3e8v_A Possible transglutamina 94.9 0.16 6.6E-06 26.5 9.4 65 218-286 9-81 (82) 31 1xpn_A Hypothetical protein PA 94.8 0.054 2.3E-06 29.5 5.7 45 238-282 111-167 (170) 32 1xpn_A Hypothetical protein PA 93.2 0.22 9.4E-06 25.5 6.4 50 155-204 109-168 (170) 33 1d2o_A Collagen adhesin, CNA; 90.1 0.72 3E-05 22.2 19.4 129 54-189 23-170 (187) 34 1ti6_B Pyrogallol hydroxytrans 88.8 0.89 3.7E-05 21.6 7.5 63 221-284 207-272 (274) 35 2bum_B Protocatechuate 3,4-dio 87.1 1.1 4.7E-05 21.0 7.0 59 35-93 75-150 (241) 36 3pcg_M Protocatechuate 3,4-dio 84.0 1.6 6.7E-05 20.0 6.5 59 35-93 74-149 (238) 37 2pn5_A TEP1R, thioester-contai 83.8 1.6 6.8E-05 20.0 25.7 224 36-262 114-381 (1325) 38 1s9a_A Pyrocatechase, chloroca 83.5 1.7 7E-05 19.9 6.5 59 35-93 100-171 (257) 39 1tmx_A Hydroxyquinol 1,2-dioxy 80.9 2.1 8.7E-05 19.3 6.4 59 35-93 130-199 (293) 40 3pcg_A Protocatechuate 3,4-dio 80.6 2.1 8.9E-05 19.2 5.7 58 35-92 45-115 (200) 41 1wlh_A Gelation factor; ABP-12 80.2 2.2 9.2E-05 19.1 13.7 199 76-278 62-294 (311) 42 3hhy_A 1,2-CTD, catechol 1,2-d 80.1 2.2 9.3E-05 19.1 6.7 58 36-93 129-198 (280) 43 3n9t_A PNPC; phospholipid bind 79.6 2.3 9.6E-05 19.0 6.4 59 35-93 126-196 (290) 44 2azq_A Catechol 1,2-dioxygenas 79.3 2.3 9.8E-05 18.9 6.8 58 36-93 130-199 (311) 45 2p9r_A Alpha-2-M, alpha-2-macr 78.7 2.4 0.0001 18.8 9.3 47 228-274 39-97 (102) 46 1f86_A Transthyretin Thr119Met 77.3 2.7 0.00011 18.6 5.9 43 53-95 16-64 (115) 47 2h0e_A Transthyretin-like prot 77.2 2.6 0.00011 18.6 4.2 54 39-95 11-69 (121) 48 2xsu_A Catechol 1,2 dioxygenas 75.4 3 0.00013 18.2 6.6 59 35-93 133-203 (312) 49 2v5m_A Dscam; neurobiology SPL 73.3 3.4 0.00014 17.9 9.8 53 221-276 333-388 (388) 50 1nqj_A Class 1 collagenase; be 70.6 3.9 0.00016 17.5 7.9 12 169-180 94-105 (119) 51 1dmh_A 1,2-CTD, catechol 1,2-d 68.6 4.3 0.00018 17.2 6.8 58 36-93 131-202 (311) 52 1f00_I Intimin; immunoglobulin 68.6 4.3 0.00018 17.2 8.3 64 37-102 19-84 (282) 53 1oo2_A Transthyretin; retinol- 64.3 5.1 0.00022 16.7 5.9 56 39-95 4-65 (119) 54 3gf8_A Putative polysaccharide 63.2 5.4 0.00023 16.6 5.5 20 82-101 68-87 (296) 55 3mlq_E Transcription-repair co 63.0 5.4 0.00023 16.5 3.6 46 85-130 2-47 (71) 56 2boy_A 3-chlorocatechol 1,2-di 61.5 5.8 0.00024 16.4 9.5 59 35-93 99-169 (254) 57 2h4e_A Transthyretin; amyloid, 61.4 5.8 0.00024 16.4 5.9 56 39-95 12-73 (127) 58 2bum_A Protocatechuate 3,4-dio 60.9 5.9 0.00025 16.3 5.3 58 35-92 49-124 (209) 59 2g2n_A Transthyretin-like prot 60.7 6 0.00025 16.3 5.9 56 39-95 6-66 (114) 60 3eja_A Protein GH61E; beta san 53.9 6.5 0.00027 16.0 2.4 12 169-180 126-137 (208) 61 1qfh_A Protein (gelation facto 51.1 8.5 0.00036 15.3 13.9 15 86-100 77-91 (212) 62 2qfe_A Calpain-7; C2-like doma 49.8 8.9 0.00038 15.2 3.8 34 249-282 110-143 (148) 63 3iwv_A 5-hydroxyisourate hydro 48.8 9.2 0.00039 15.1 3.6 56 39-95 28-90 (138) 64 3d33_A Domain of unknown funct 48.4 9.4 0.00039 15.0 9.9 53 222-274 46-108 (108) 65 1zdv_A Outer membrane usher pr 46.5 10 0.00042 14.8 3.3 14 85-98 3-16 (115) 66 3o6u_A Uncharacterized protein 42.3 12 0.00049 14.4 5.1 36 170-205 2-38 (128) 67 1lyq_A PCOC copper resistance 41.4 12 0.0005 14.3 4.5 23 248-270 73-98 (104) 68 2j3s_A Filamin-A; acetylation, 39.5 13 0.00054 14.1 11.5 186 71-275 51-284 (288) 69 3hn5_A Putative exported prote 37.7 14 0.00057 14.0 11.4 74 37-111 9-92 (215) 70 3pay_A Putative adhesin; struc 35.4 15 0.00062 13.7 5.3 16 85-100 71-86 (314) 71 2eyq_A TRCF, transcription-rep 32.0 17 0.00071 13.4 3.6 28 248-275 477-504 (1151) 72 2dlg_A Filamin-B; beta-sandwic 29.0 19 0.00079 13.1 6.6 24 253-276 66-90 (102) 73 2e7m_A Protein KIAA0319; PKD d 26.9 21 0.00086 12.8 6.6 11 248-258 74-84 (113) 74 2kzx_A Uncharacterized protein 26.6 21 0.00087 12.8 4.6 37 170-206 1-38 (131) 75 3jqw_A COLH protein, collagena 22.9 24 0.001 12.3 11.4 12 169-180 91-102 (121) 76 2inu_A Inulin fructotransferas 22.7 25 0.001 12.3 1.9 10 84-93 60-69 (410) 77 3lpw_A A77-A78 domain from tit 21.8 26 0.0011 12.2 14.9 18 164-181 159-177 (197) 78 2d7p_A Filamin-C; beta-sandwic 21.6 26 0.0011 12.2 6.3 27 252-278 75-102 (112) 79 3bwu_D FIMD, outer membrane us 21.0 27 0.0011 12.1 4.0 12 85-96 27-38 (125) 80 2bcm_B F1845 fimbrial protein; 20.4 27 0.0011 12.0 1.8 13 168-180 121-133 (165) No 1 >3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} Probab=99.77 E-value=1.8e-16 Score=123.13 Aligned_cols=248 Identities=9% Similarity=0.060 Sum_probs=135.4 Q ss_pred EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCE-----EEEEEECCC Q ss_conf 279999986887753467599999538887620588982468566302267218999961577752-----789980686 Q gi|254780160|r 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVV-----KKITVSSKE 112 (298) Q Consensus 38 ~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~-----~~vtV~~~~ 112 (298) +|.|... +..+..|+||+|+||+... .......+|+++|.+.+.+|+||+|.|+|...|.+|. ..+++.... T Consensus 9 ~i~i~K~--d~~~~~L~Ga~f~l~~~~g-~~~~~~~tTd~~G~~~f~~L~~G~Y~v~E~~aP~GY~~~~~~~~~~v~~~~ 85 (355) T 3kpt_A 9 AVDLIKT--GVNEKAMAGAVFSLFKKDG-TEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFVKNSG 85 (355) T ss_dssp EEEEEEE--CGGGCBCCSCEEEEEETTS-CEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCCCCCEEEEECSCE T ss_pred EEEEEEE--CCCCCEECCCEEEEEECCC-CEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCC T ss_conf 9999999--8999870895899998999-999787999999839999869632899999899982603442201651365 Q ss_pred CEE----------EEEEECCCCEEEEEEEECCCC----CCCCCEEEEEEE------------------CCCCCE------ Q ss_conf 136----------787513664379998615788----777551899998------------------389743------ Q gi|254780160|r 113 KNQ----------KQVFILNAGGIRLYSIYKPGS----PIVDDELTFSIY------------------SNPNHK------ 154 (298) Q Consensus 113 ~~~----------~~~~~~~ag~~~~~~~~~~~~----~~~~~~~~f~i~------------------~~~~~~------ 154 (298) ... ....+.......+........ ..+.....+.+. ...... T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (355) T 3kpt_A 86 TINEDGTITSGTVVKMEVKNNEEPTIDKKINGKLEALPINPLTNYNYDIKTLIPEDIKEYKKYVVTDTLDNRLVIQGKPI 165 (355) T ss_dssp EECTTSSCEEECEEEEEEECCBCCCEEEEETTTBSEEEECTTCCEEEEEEEECCTTGGGCSEEEEEEECCTTEEECSCCE T ss_pred EEEEECEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEECCEEEEEEECCCCCEEECCEEE T ss_conf 03440115245305778720012110111245125543036754157876325420001347999982656378526046 Q ss_pred ------------EEE----------EEECCCCCEEEEECCCCEEEEEEECCCCCEEEE--E--EEECCCCE-----EEEE Q ss_conf ------------566----------750567513521067617999961577854454--4--88428863-----7899 Q gi|254780160|r 155 ------------ALL----------ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST--V--VKVEPGKI-----IDVT 203 (298) Q Consensus 155 ------------~~~----------~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~--~--i~V~~g~~-----~~~t 203 (298) ... ............+..+.|.+++...|.++.... . +....... .... T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355) T 3kpt_A 166 VKIDGAEVNANVVEVAIEGQKVTATVKDFTKMDGKKEFHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEKESKPVV 245 (355) T ss_dssp EEETTEECCTTTEEEEEETTEEEEEECCSGGGTTCCEEEEEEEEEECTTCCTTCCEEECCEEEEECTTCCEEEEECCCEE T ss_pred EEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEECCCCEEEEECCCCEEEEEEEEEEE T ss_conf 77527653001588832686798986202333463234444127988733665030344307897357603555666678 Q ss_pred EEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCE----------EEECCCCEEECCCCCEEEEEEEECCCCEEEE---- Q ss_conf 99345238999983478863276089998389979----------7421252121244870289999538824677---- Q gi|254780160|r 204 IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT----------VGESANASPSMVLSEGDYTVIARNKERNYSR---- 269 (298) Q Consensus 204 v~~~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~----------vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~---- 269 (298) .....+.+.+.+++..++++|+||.|.|++.+|.. +++.+|.+.+.+|++|+|+|.+..+|.+|.. T Consensus 246 ~~~~~g~~~~~K~d~~~~~~L~Ga~F~l~~~~g~~v~~~~~~~t~~Td~~G~~~~~~L~~G~Y~l~EtkaP~GY~~~~~~ 325 (355) T 3kpt_A 246 VIPTTGIIELTKIDSANKNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTK 325 (355) T ss_dssp EEECEEEEEEEEEETTTCCBCSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEEECCEEECTTCCE T ss_pred EEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCCEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCCCCCC T ss_conf 86741524799974888830188589999179999950574768998999889989998935999999789974357764 Q ss_pred --------EEEEEECCC-CEEEEEEECH Q ss_conf --------799972885-0489997410 Q gi|254780160|r 270 --------EFSVLTGKS-TIVEVLMRQK 288 (298) Q Consensus 270 --------~ftV~~g~~-~~veV~~~~~ 288 (298) ++.|...++ ..+++.+.++ T Consensus 326 ~~y~~~~~~i~~~i~~~~~~~~~t~~n~ 353 (355) T 3kpt_A 326 TSYQLLKDPIDVKISENNQTVKLTIENN 353 (355) T ss_dssp EECCCCCSCEEEECBTTBCEEEEEEEEC T ss_pred CCEEECCCEEEEEEEECCEEEEEEEEEC T ss_conf 4459749608999951992999999957 No 2 >2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} Probab=99.64 E-value=9.5e-15 Score=112.02 Aligned_cols=162 Identities=18% Similarity=0.169 Sum_probs=103.0 Q ss_pred CCCCCCCCCCEEEEEEECCCCCCCE--------------------EEEEEECCCCEEEECCCCCEEEEEEEECCCCCE-- Q ss_conf 6887753467599999538887620--------------------588982468566302267218999961577752-- Q gi|254780160|r 46 TENSTSIDSGVSWHIFDSISNKKNT--------------------LSTTKKIIGGKVSFDLFPGDYLISASFGHVGVV-- 103 (298) Q Consensus 46 ~~~~~~~~~G~~~~vy~~~~~~~g~--------------------~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~-- 103 (298) .+....+++|+.|+||....+.++. ...+|+++|...+.+|++|+|.|++..++.++. T Consensus 25 ~~~~~~pl~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~E~~ap~gy~~~ 104 (239) T 2pz4_A 25 APKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRNV 104 (239) T ss_dssp CCSSCEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEECTTB T ss_pred CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCC T ss_conf 16899373786899999313664521045550234301678968899998999879988669846999999789885257 Q ss_pred EEEEEECCCCEEEEE-EECCCCEEEEEEEEC-CCCCCCCCEEEEEEECCCCCE----------------EEEEEECCCCC Q ss_conf 789980686136787-513664379998615-788777551899998389743----------------56675056751 Q gi|254780160|r 104 KKITVSSKEKNQKQV-FILNAGGIRLYSIYK-PGSPIVDDELTFSIYSNPNHK----------------ALLITDKVRSG 165 (298) Q Consensus 104 ~~vtV~~~~~~~~~~-~~~~ag~~~~~~~~~-~~~~~~~~~~~f~i~~~~~~~----------------~~~~t~~~~~~ 165 (298) .++++..+....... .....+.+.+.++.. .....++++++|.|+..++.. ..+.++..|.. T Consensus 105 ~~~~v~~~~~~~~~~~~~~~~g~~~~~K~~~d~~~~~~L~gA~f~l~~~~g~~~~~~~~~~~~~~~~~~~~~~Td~~G~~ 184 (239) T 2pz4_A 105 SAFLVDLSEDKVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHI 184 (239) T ss_dssp CCEEEEESSCEEECCCBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEE T ss_pred CCEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEECCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCE T ss_conf 64799707871797878631015999996356887620077599999289988543475330467722337998999829 Q ss_pred EEEEECCCCEEEEEEECCCCCEEE---EEEEECCCCEEEEEEEEC Q ss_conf 352106761799996157785445---448842886378999934 Q gi|254780160|r 166 TLVRLGTNNYQITSHYGKYNAIVS---TVVKVEPGKIIDVTIQNR 207 (298) Q Consensus 166 ~~~~L~~G~Y~v~et~a~~~~~~~---~~i~V~~g~~~~~tv~~~ 207 (298) .+.+|++|+|+|+|+.+|.||.+. ..|+|..++...+++.+. T Consensus 185 ~~~~L~~G~Y~l~E~~aP~GY~l~~~~~~~tv~~~~~~~~~v~N~ 229 (239) T 2pz4_A 185 RISGLIHGDYVLKEIETQSGYQIGQAETAVTIEKSKTVTVTIENK 229 (239) T ss_dssp EEEEEESEEEEEEEEECCTTBCCCCSEEEEEECTTSEEEEEEEEE T ss_pred EECCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCEEEEEEEEE T ss_conf 887779954999997899996948964899993998799999931 No 3 >2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} Probab=99.60 E-value=1.3e-14 Score=111.24 Aligned_cols=155 Identities=12% Similarity=0.122 Sum_probs=110.4 Q ss_pred CCCCCEEEEEEECCC----------------------CCE-EEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEE Q ss_conf 777551899998389----------------------743-566750567513521067617999961577854454488 Q gi|254780160|r 137 PIVDDELTFSIYSNP----------------------NHK-ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK 193 (298) Q Consensus 137 ~~~~~~~~f~i~~~~----------------------~~~-~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i~ 193 (298) ..|+.+++|.++... +.. ...+++..|...+.+|++|+|+++|+.+|.+|....+++ T Consensus 29 ~~pl~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~E~~ap~gy~~~~~~~ 108 (239) T 2pz4_A 29 GTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRNVSAFL 108 (239) T ss_dssp CEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEECTTBCCEE T ss_pred CCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCEE T ss_conf 93737868999993136645210455502343016789688999989998799886698469999997898852576479 Q ss_pred ECCCCEEEE--EEEECCCEEEEEEEE--CCCCCCCCCEEEEEECCCCC-------------------EEEECCCCEEECC Q ss_conf 428863789--999345238999983--47886327608999838997-------------------9742125212124 Q gi|254780160|r 194 VEPGKIIDV--TIQNRAAKITFKLVS--EMGGEAVADTAWSILTASGD-------------------TVGESANASPSMV 250 (298) Q Consensus 194 V~~g~~~~~--tv~~~~~~~~~~~v~--~~~G~~l~ga~~~i~~~~g~-------------------~vt~~~G~~~~~~ 250 (298) +..+....+ ......+.+.+.+++ ...+++|+||.|.|++.+|. .+++.+|.|.+.+ T Consensus 109 v~~~~~~~~~~~~~~~~g~~~~~K~~~d~~~~~~L~gA~f~l~~~~g~~~~~~~~~~~~~~~~~~~~~~Td~~G~~~~~~ 188 (239) T 2pz4_A 109 VDLSEDKVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISG 188 (239) T ss_dssp EEESSCEEECCCBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEEEEEE T ss_pred EECCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEECCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCEEECC T ss_conf 97078717978786310159999963568876200775999992899885434753304677223379989998298877 Q ss_pred CCCEEEEEEEECCCCEEE-----EEEEEEECCCCEEEEEEECHHCCCC Q ss_conf 487028999953882467-----7799972885048999741010356 Q gi|254780160|r 251 LSEGDYTVIARNKERNYS-----REFSVLTGKSTIVEVLMRQKRMDKN 293 (298) Q Consensus 251 L~~G~Y~v~a~~~~~~y~-----~~ftV~~g~~~~veV~~~~~~~~~~ 293 (298) |++|+|++.+...|.+|. ..|+|..+ ..+.+.+.++....+ T Consensus 189 L~~G~Y~l~E~~aP~GY~l~~~~~~~tv~~~--~~~~~~v~N~k~~~p 234 (239) T 2pz4_A 189 LIHGDYVLKEIETQSGYQIGQAETAVTIEKS--KTVTVTIENKKVPTP 234 (239) T ss_dssp EESEEEEEEEEECCTTBCCCCSEEEEEECTT--SEEEEEEEEEBCCCC T ss_pred CCCCEEEEEEEECCCCCCCCCCEEEEEEECC--CEEEEEEEEEECCCC T ss_conf 7995499999789999694896489999399--879999993167999 No 4 >3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X* Probab=99.13 E-value=3.2e-08 Score=69.77 Aligned_cols=84 Identities=12% Similarity=0.131 Sum_probs=54.9 Q ss_pred CEEEEEEEEC-CCCCCCCCEEEEEECCCC-----------------CEEEECCCCEEE--------------------CC Q ss_conf 2389999834-788632760899983899-----------------797421252121--------------------24 Q gi|254780160|r 209 AKITFKLVSE-MGGEAVADTAWSILTASG-----------------DTVGESANASPS--------------------MV 250 (298) Q Consensus 209 ~~~~~~~v~~-~~G~~l~ga~~~i~~~~g-----------------~~vt~~~G~~~~--------------------~~ 250 (298) +...+.+++. ....+|+||.|.|+...+ ..+++..|.+.+ .. T Consensus 307 ~~~~i~K~~~~~~~~~l~gA~F~l~~~~~~~~~~~~~~~~~~~~~~~~~td~~G~~~~~~l~~~~~~~~~~~~~~~~~~~ 386 (436) T 3hr6_A 307 GQITIEKSFDGNTPGADRTATFQLHRCEADGSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWA 386 (436) T ss_dssp EEEEEEEEETTBCCCTTCCCEEEEEEECTTSCBCTTCCCCCBTTBCCEECCTTSEEEEEEEEEEEEEEETTEEEEEETTT T ss_pred CCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEECCCEEEEEECCCCEEEECCCCCCCEEECCCCCCEEEECC T ss_conf 51378970357875102661799996467621320255111166059998999839974675452141034443021057 Q ss_pred CCCEEEEEEEECCCCEEEE-----EEEEEECCCC--EEEEEEECHHCCC Q ss_conf 4870289999538824677-----7999728850--4899974101035 Q gi|254780160|r 251 LSEGDYTVIARNKERNYSR-----EFSVLTGKST--IVEVLMRQKRMDK 292 (298) Q Consensus 251 L~~G~Y~v~a~~~~~~y~~-----~ftV~~g~~~--~veV~~~~~~~~~ 292 (298) |++|+|.|++..+|.+|.. .|+|...... .++..++..|-+| T Consensus 387 l~~g~Y~l~EtkAP~GY~l~~~pi~fti~~~~~~~~~~~~~~~v~N~k~ 435 (436) T 3hr6_A 387 GKGTEFCLVETATASGYELLPKPVIVKLEANESTNVLVEQKVKIDNKKK 435 (436) T ss_dssp TSCSEEEEEEEECCTTCBCCSSCEEECCCCCTTCCSCEEEEEEEEEBC- T ss_pred CCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCC T ss_conf 8887599999378999675997589999627852477677799531579 No 5 >2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae} Probab=98.99 E-value=1.5e-09 Score=78.31 Aligned_cols=81 Identities=17% Similarity=0.295 Sum_probs=65.8 Q ss_pred CCCEEEEEEEECCCCCCCCCEEEEEECCCCC----------------EEEECCCCEEECCCCCEEEEEEEECCCCEEEE- Q ss_conf 4523899998347886327608999838997----------------97421252121244870289999538824677- Q gi|254780160|r 207 RAAKITFKLVSEMGGEAVADTAWSILTASGD----------------TVGESANASPSMVLSEGDYTVIARNKERNYSR- 269 (298) Q Consensus 207 ~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~----------------~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~- 269 (298) ..+.+.+.+++..++++|+||.|+|++.+|+ ..++.+|.+.+.+|++|+|++++..+|.+|+. T Consensus 734 ~~g~v~~~K~d~~~~~~L~GA~F~l~~~~~~~~~~~~~~~~~~~~~~~~T~~~G~~~~~~L~~G~Y~l~EtkAP~GY~~~ 813 (893) T 2ww8_A 734 KLGDIEFIKVNKNDKKPLRGAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLTFKNLSDGKYRLFENSEPAGYKPV 813 (893) T ss_dssp CCEEEEEEEEETTTCCBCSSCEEEEEEECSSCSSCEECSSSSCTTSSEECCTTCEEEEEEECSEEEEEEEEECCTTBCCC T ss_pred EEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCC T ss_conf 67469999960889977388489999768971001100357860678996899989979889825899999789986616 Q ss_pred ------EEEEEECCCCEEEEEEEC Q ss_conf ------799972885048999741 Q gi|254780160|r 270 ------EFSVLTGKSTIVEVLMRQ 287 (298) Q Consensus 270 ------~ftV~~g~~~~veV~~~~ 287 (298) .|+|..|+...+..+... T Consensus 814 ~~~~~~~~~i~~~~~~~~~~~~~~ 837 (893) T 2ww8_A 814 QNKPIVAFQIVNGEVRDVTSIVPQ 837 (893) T ss_dssp EEEEEEEEEEETTEEEEEEECCCT T ss_pred CCCCEEEEEEECCCEEEEEEECCC T ss_conf 888639999947936567886168 No 6 >2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae} Probab=98.99 E-value=5.4e-08 Score=68.33 Aligned_cols=75 Identities=12% Similarity=0.196 Sum_probs=58.6 Q ss_pred EEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCE-----EEEEEECCCCE Q ss_conf 9999986887753467599999538887620588982468566302267218999961577752-----78998068613 Q gi|254780160|r 40 TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVV-----KKITVSSKEKN 114 (298) Q Consensus 40 ~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~-----~~vtV~~~~~~ 114 (298) .+..+++++++.+|+||+|+|+++..+.. ...++|+++|.+.+.+|+||+|+|+|..+|.+|. ..|+|..++.. T Consensus 49 ~v~i~K~~~~g~~L~gA~F~L~~~~~~~~-v~~~TTd~~G~~tf~~L~pG~Y~l~Et~AP~GY~~~~~~~~vtv~~~~~~ 127 (893) T 2ww8_A 49 KVVIKETGEGGALLGDAVFELKNNTDGTT-VSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKNGRT 127 (893) T ss_dssp EEEEEEECSTTCBCCCCEEEEEETTTCCE-EEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEECTTCCE T ss_pred EEEEEEECCCCCCCCCCEEEEEECCCCEE-EEEEEECCCCEEEECCCCCEEEEEEEEECCCCEEECCCEEEEEECCCCEE T ss_conf 89999978999846898899998999969-77999899868999981887899999868998488897689999469769 Q ss_pred E Q ss_conf 6 Q gi|254780160|r 115 Q 115 (298) Q Consensus 115 ~ 115 (298) . T Consensus 128 ~ 128 (893) T 2ww8_A 128 T 128 (893) T ss_dssp E T ss_pred E T ss_conf 9 No 7 >2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A Probab=98.92 E-value=2e-10 Score=84.00 Aligned_cols=146 Identities=15% Similarity=0.095 Sum_probs=94.7 Q ss_pred CCCCCCEEEEEEECCCCCEE---EEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEE-------EEECCCC--E---- Q ss_conf 87775518999983897435---667505675135210676179999615778544544-------8842886--3---- Q gi|254780160|r 136 SPIVDDELTFSIYSNPNHKA---LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTV-------VKVEPGK--I---- 199 (298) Q Consensus 136 ~~~~~~~~~f~i~~~~~~~~---~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~-------i~V~~g~--~---- 199 (298) ....+..+.|.++....... ...++..+...+..|.++.|+.++..+|.+|..... +++.... . T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~y~~~e~~~~gy~~~~~~~~~~~~~~i~~~~~~~~~~~ 254 (444) T 2x9x_A 175 PIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPL 254 (444) T ss_dssp BCCCCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEEEEECCCCCCCB T ss_pred CCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCEEE T ss_conf 35567504789983467602225787146750787513567427999974788501000026750699972144342050 Q ss_pred EEEEEEECCCEEEEEEEECCCCCCCCCEEEEEECCCCC------------------------------------------ Q ss_conf 78999934523899998347886327608999838997------------------------------------------ Q gi|254780160|r 200 IDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGD------------------------------------------ 237 (298) Q Consensus 200 ~~~tv~~~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~------------------------------------------ 237 (298) .........+.+.+.+++. .+++|+||+|.|++.++. T Consensus 255 ~~~~~~~~~~~~~~~k~d~-~~~~l~ga~f~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (444) T 2x9x_A 255 DPTEPKVVTYGKKFVKVND-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQT 333 (444) T ss_dssp CCCCCEEECEEEEEEEECT-TCCBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTSCCC--- T ss_pred CCCCCCEEECCEEEEEECC-CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCC T ss_conf 3666657967789999589-998838878999977895689876146533100003554522567412440233135430 Q ss_pred --------------------------------------EEEECCCCEEECCCCCEEEEEEEECCCCEEEE-----EEEEE Q ss_conf --------------------------------------97421252121244870289999538824677-----79997 Q gi|254780160|r 238 --------------------------------------TVGESANASPSMVLSEGDYTVIARNKERNYSR-----EFSVL 274 (298) Q Consensus 238 --------------------------------------~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~-----~ftV~ 274 (298) .+++.+|.+.+.+|++|+|+|++..+|.+|+. .|+|. T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~~~~i~ftV~ 413 (444) T 2x9x_A 334 QQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVT 413 (444) T ss_dssp ---CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSCCCCSCEEEEEC T ss_pred EECEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEE T ss_conf 00302599998514456434660699997689848999998999859989889784899997899993977864899996 Q ss_pred ECCCCEEE Q ss_conf 28850489 Q gi|254780160|r 275 TGKSTIVE 282 (298) Q Consensus 275 ~g~~~~ve 282 (298) .+.....+ T Consensus 414 ~~~~~~~~ 421 (444) T 2x9x_A 414 ATSYSATG 421 (444) T ss_dssp TTTTTCSS T ss_pred CCCEEECC T ss_conf 89614144 No 8 >2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes} Probab=98.90 E-value=1.4e-08 Score=72.09 Aligned_cols=93 Identities=12% Similarity=0.022 Sum_probs=55.3 Q ss_pred CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEE--EECCCCE Q ss_conf 66437999861578877755189999838974356675056751352106761799996157785445448--8428863 Q gi|254780160|r 122 NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVV--KVEPGKI 199 (298) Q Consensus 122 ~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i--~V~~g~~ 199 (298) ..+.+.+.+++..+ .++++++|.|+..++.....+.+ +|...+.+|++|+|+|+|+.+|.||.+..++ +|..... T Consensus 26 ~~~~v~i~K~D~~g--~~L~GA~F~l~~~~g~~v~~~~t-dG~~~~~~L~~G~Y~l~E~~aP~GY~~~~~~~ftv~~~~~ 102 (121) T 2x5p_A 26 SATHIKFSKRDIDG--KELAGATMELRDSSGKTISTWIS-DGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTVNEQGQ 102 (121) T ss_dssp CCEEEEEEEECTTC--CBCCCCEEEEECTTSCEEEEEEC-CSSCEEEEECSEEEEEEEEECCTTCCCCCCEEEEECTTCC T ss_pred CCEEEEEEEECCCC--CEECCEEEEEEECCCCEEEEEEC-CCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCE T ss_conf 81899999992995--99579799999898999999923-9989988669978999997289997918968899988868 Q ss_pred EEEEEEECCCEEEEEEEE Q ss_conf 789999345238999983 Q gi|254780160|r 200 IDVTIQNRAAKITFKLVS 217 (298) Q Consensus 200 ~~~tv~~~~~~~~~~~v~ 217 (298) ..+......+.+.+.++| T Consensus 103 vtv~~~~~~g~~~i~K~D 120 (121) T 2x5p_A 103 VTVNGKATKGDAHIVMVD 120 (121) T ss_dssp EEETTEEECSSEEEEEEC T ss_pred EEEEEEEEEEEEEEEEEC T ss_conf 999978744249999826 No 9 >2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes} Probab=98.81 E-value=3.5e-08 Score=69.56 Aligned_cols=87 Identities=22% Similarity=0.306 Sum_probs=48.7 Q ss_pred EECCCCEEEEEEEEC-CCEEEEEEEECCCCCCCCCEEEEEECCCCCEE--EECCCCEEECCCCCEEEEEEEECCCCEEEE Q ss_conf 842886378999934-52389999834788632760899983899797--421252121244870289999538824677 Q gi|254780160|r 193 KVEPGKIIDVTIQNR-AAKITFKLVSEMGGEAVADTAWSILTASGDTV--GESANASPSMVLSEGDYTVIARNKERNYSR 269 (298) Q Consensus 193 ~V~~g~~~~~tv~~~-~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~v--t~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~ 269 (298) ..+.++...+++... .+.+.+.+++. .|++|+||.|.|++.+|.++ +.++|.+.+.+|++|+|++.+..+|.+|.. T Consensus 11 ~~~~~~~~~~~i~~~~~~~v~i~K~D~-~g~~L~GA~F~l~~~~g~~v~~~~tdG~~~~~~L~~G~Y~l~E~~aP~GY~~ 89 (121) T 2x5p_A 11 SSEQGQSGDMTIEEDSATHIKFSKRDI-DGKELAGATMELRDSSGKTISTWISDGQVKDFYLMPGKYTFVETAAPDGYEV 89 (121) T ss_dssp --------------CCCEEEEEEEECT-TCCBCCCCEEEEECTTSCEEEEEECCSSCEEEEECSEEEEEEEEECCTTCCC T ss_pred EECCCCCCCEEECCCCCEEEEEEEECC-CCCEECCEEEEEEECCCCEEEEEECCCEEEECCCCCCEEEEEEECCCCCCCC T ss_conf 502685442898469818999999929-9599579799999898999999923998998866997899999728999791 Q ss_pred --EEEEEECCCCE Q ss_conf --79997288504 Q gi|254780160|r 270 --EFSVLTGKSTI 280 (298) Q Consensus 270 --~ftV~~g~~~~ 280 (298) ++++....+.. T Consensus 90 ~~~~~ftv~~~~~ 102 (121) T 2x5p_A 90 ATAITFTVNEQGQ 102 (121) T ss_dssp CCCEEEEECTTCC T ss_pred CCCEEEEECCCCE T ss_conf 8968899988868 No 10 >2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A Probab=98.76 E-value=3.4e-08 Score=69.59 Aligned_cols=77 Identities=9% Similarity=0.053 Sum_probs=60.2 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCEE----EEEEEC Q ss_conf 0232799999868877534675999995388876205889824685663022672189999615777527----899806 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVK----KITVSS 110 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~~----~vtV~~ 110 (298) ...+|.|.....+|...+|+||+|+||+...... ...+++.+|...+.+|+||+|+|+|..+|.+|.. .++|.. T Consensus 23 ~~~~~~i~Kvd~~d~~k~L~GA~F~l~~~~g~~~--~~~ttd~~G~~~~~~L~~GtY~l~E~~AP~GY~l~~~~~~tV~~ 100 (457) T 2xi9_A 23 QTTSVLIRKYAIGDYSKLLEGATLQLTGDNVNSF--QARVFSSNDIGERIELSDGTYTLTELNSPAGYSIAEPITFKVEA 100 (457) T ss_dssp --CEEEEEEEETTBCSSCCCCCEEEEC-----------CEEECCSSCEEEECCSEEEEEEEEECCTTBCCCCCEEEEEET T ss_pred CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEE--EEEEECCCCEEEECCCCCCCEEEEEEECCCCCEECCCEEEEEEC T ss_conf 3268999997268999798884899996899989--99998789848989839941899998799982908975899906 Q ss_pred CCC Q ss_conf 861 Q gi|254780160|r 111 KEK 113 (298) Q Consensus 111 ~~~ 113 (298) ++. T Consensus 101 ~~~ 103 (457) T 2xi9_A 101 GKV 103 (457) T ss_dssp TEE T ss_pred CCE T ss_conf 954 No 11 >2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A Probab=98.71 E-value=3.7e-08 Score=69.40 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=64.3 Q ss_pred CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEE-EEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEE--EEECCCC Q ss_conf 6643799986157887775518999983897435-667505675135210676179999615778544544--8842886 Q gi|254780160|r 122 NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKA-LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTV--VKVEPGK 198 (298) Q Consensus 122 ~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~-~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~--i~V~~g~ 198 (298) ..+.+.+.+++..+...++++|+|.|+..++... ..+++..|...+.+|++|+|+|+|+.||.||.+..+ |+|..++ T Consensus 23 ~~~~~~i~Kvd~~d~~k~L~GA~F~l~~~~g~~~~~~ttd~~G~~~~~~L~~GtY~l~E~~AP~GY~l~~~~~~tV~~~~ 102 (457) T 2xi9_A 23 QTTSVLIRKYAIGDYSKLLEGATLQLTGDNVNSFQARVFSSNDIGERIELSDGTYTLTELNSPAGYSIAEPITFKVEAGK 102 (457) T ss_dssp --CEEEEEEEETTBCSSCCCCCEEEEC---------CEEECCSSCEEEECCSEEEEEEEEECCTTBCCCCCEEEEEETTE T ss_pred CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCCCCCEEEEEEECCCCCEECCCEEEEEECCC T ss_conf 32689999972689997988848999968999899999878984898983994189999879998290897589990695 Q ss_pred EEEE Q ss_conf 3789 Q gi|254780160|r 199 IIDV 202 (298) Q Consensus 199 ~~~~ 202 (298) .... T Consensus 103 ~~~~ 106 (457) T 2xi9_A 103 VYTI 106 (457) T ss_dssp EEEE T ss_pred EEEE T ss_conf 4887 No 12 >1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1 Probab=98.70 E-value=8.4e-06 Score=54.15 Aligned_cols=213 Identities=10% Similarity=0.069 Sum_probs=108.4 Q ss_pred CCCCCEEEEEEECCCCCCCEEEEEEECCCC--EEEECCCCC------EEEEEEEECCCCCEEEEEEECCCCEEEEEEE-C Q ss_conf 534675999995388876205889824685--663022672------1899996157775278998068613678751-3 Q gi|254780160|r 51 SIDSGVSWHIFDSISNKKNTLSTTKKIIGG--KVSFDLFPG------DYLISASFGHVGVVKKITVSSKEKNQKQVFI-L 121 (298) Q Consensus 51 ~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~--~~~~~L~pG------~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~-~ 121 (298) ...+++.+.||... ...+. ..+.+..|. ..+.+||.+ .|.+.+...+.++.................. . T Consensus 110 ~~~~~~~v~l~~~g-~~~~~-t~~~~~~g~w~~t~~~L~~~~~~~~~~ytv~e~~~~~g~~~~~~~~~~~~~~~~~~~~~ 187 (373) T 1d2p_A 110 KRPTEIKVELYQDG-KATGK-TAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTHVDNNDMGNLITTNKYTP 187 (373) T ss_dssp CCCSEEEEEEEETT-EEEEE-EEEEEGGGTTEEEEEEEESBSSSSBCCEEEEECSCCTTCEEEEECSCTTSEEEEEECCC T ss_pred CCCCEEEEEEEECC-EEEEE-EEEEECCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCEEEECCCC T ss_conf 36760799999899-89247-99985589557560677756789759999986035667243203445444034100132 Q ss_pred CCCEEEEEEEEC---CCCCCCCCEEEEEEECCCCCEEEE--EEECCCCCEEEEECCC------CEEEEEEECCCCCEEEE Q ss_conf 664379998615---788777551899998389743566--7505675135210676------17999961577854454 Q gi|254780160|r 122 NAGGIRLYSIYK---PGSPIVDDELTFSIYSNPNHKALL--ITDKVRSGTLVRLGTN------NYQITSHYGKYNAIVST 190 (298) Q Consensus 122 ~ag~~~~~~~~~---~~~~~~~~~~~f~i~~~~~~~~~~--~t~~~~~~~~~~L~~G------~Y~v~et~a~~~~~~~~ 190 (298) ....+...+... ...+..+++++|.||.++...... ..++...+.+..|+++ .|.+.+...+ ++.... T Consensus 188 ~~~~i~~~~~~~~~~~~~g~~~~~~tv~l~~~g~~~~~~t~~~~~~w~~~f~~l~~~~~g~~~~ytv~e~~~~-g~~~~~ 266 (373) T 1d2p_A 188 ETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVK-DYTTDI 266 (373) T ss_dssp CEEEEEEEEEEESTTTTTSCCCSCEEEEEEETTEEEEEEEECGGGTSEEEEEEEESEETTEECCEEEEECCCT-TEEEEE T ss_pred CEECCCCEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCEEECCCCCCCCCCCEEEEEEEEECCC-CCEEEC T ss_conf 1020344179837888677347757999997996966799741788569626687666783689999754167-725522 Q ss_pred EEEECCCCEEEEEEEECCCEEEEEEE--ECC--CCCCCCCEEEEEECCCCCEE-----EECCC--CEEECCCC------C Q ss_conf 48842886378999934523899998--347--88632760899983899797-----42125--21212448------7 Q gi|254780160|r 191 VVKVEPGKIIDVTIQNRAAKITFKLV--SEM--GGEAVADTAWSILTASGDTV-----GESAN--ASPSMVLS------E 253 (298) Q Consensus 191 ~i~V~~g~~~~~tv~~~~~~~~~~~v--~~~--~G~~l~ga~~~i~~~~g~~v-----t~~~G--~~~~~~L~------~ 253 (298) . +.....+...........+. +.. .+.+..++.+.|+.. |..+ .++.| .+.+.+|| + T Consensus 267 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~l~~~-g~~~~~~~t~~~~g~wt~t~~~L~~~~~G~~ 340 (373) T 1d2p_A 267 N-----GTTITNKYTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQD-GKATGKTAILNESNNWTHTWTGLDEKAKGQQ 340 (373) T ss_dssp E-----TTEEEEEECTTEEEEEEEEEEESGGGTTSCCCSEEEEEEEET-TEEEEEEEEEETTTTTEEEEEEEESEETTEE T ss_pred C-----CEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEC-CEEEEEEEEECCCCCEEEEECCCCCCCCCCE T ss_conf 5-----514321014445555302465038875466886289999989-9385458997389964999767654679988 Q ss_pred EEEEEEEECCCCEEEEEEE Q ss_conf 0289999538824677799 Q gi|254780160|r 254 GDYTVIARNKERNYSREFS 272 (298) Q Consensus 254 G~Y~v~a~~~~~~y~~~ft 272 (298) +.|+|.+...+.+|+..++ T Consensus 341 ~~Y~v~E~~~p~gY~~s~~ 359 (373) T 1d2p_A 341 VKYTVEELTKVKGYTTHVD 359 (373) T ss_dssp CCEEEEECSCCTTEEEEEE T ss_pred EEEEEEEECCCCCCEEEEE T ss_conf 9999998158998489997 No 13 >1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1 Probab=98.50 E-value=6.4e-05 Score=48.45 Aligned_cols=203 Identities=12% Similarity=0.059 Sum_probs=109.9 Q ss_pred CCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCC------EEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEE Q ss_conf 4675999995388876205889824685663022672------1899996157775278998068613678751366437 Q gi|254780160|r 53 DSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPG------DYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGI 126 (298) Q Consensus 53 ~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG------~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~~~ag~~ 126 (298) ++.+.++||.. ....+...+..+.++.+.+.+||.+ .|.+.+... .++... .... ............. T Consensus 22 p~~vtV~l~~~-g~~~~t~t~~~~g~w~~t~~~lp~~~~g~~~~ytV~e~~~-~g~~~~--~~~~--~~~~~~~~~~~~~ 95 (373) T 1d2p_A 22 PEKVSVNLLAN-GEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHV-KDYTTD--INGT--TITNKYTPGETSA 95 (373) T ss_dssp CSEEEEEEEET-TEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCC-TTEEEE--EETT--EEEEEECTTEEEE T ss_pred CCEEEEEEEEC-CEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEECC-CCCEEE--ECCE--EEEECCCCCCCCC T ss_conf 87179999959-9498899988899879995888766799438999998568-984663--0220--5751235322223 Q ss_pred EEEEEECC---CCCCCCCEEEEEEECCCCCEEEEE-EECCC--CCEEEEECCC------CEEEEEEECCCCCEEEEEEEE Q ss_conf 99986157---887775518999983897435667-50567--5135210676------179999615778544544884 Q gi|254780160|r 127 RLYSIYKP---GSPIVDDELTFSIYSNPNHKALLI-TDKVR--SGTLVRLGTN------NYQITSHYGKYNAIVSTVVKV 194 (298) Q Consensus 127 ~~~~~~~~---~~~~~~~~~~f~i~~~~~~~~~~~-t~~~~--~~~~~~L~~G------~Y~v~et~a~~~~~~~~~i~V 194 (298) ...+.... .....+..+.|.|+.+........ ....+ .+.+.+|+.+ .|++.+...+.+|........ T Consensus 96 ~~~~~~~d~~~~~~~~~~~~~v~l~~~g~~~~~t~~~~~~g~w~~t~~~L~~~~~~~~~~ytv~e~~~~~g~~~~~~~~~ 175 (373) T 1d2p_A 96 TVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTHVDNND 175 (373) T ss_dssp EEEEEEESTTTTTSCCCSEEEEEEEETTEEEEEEEEEEGGGTTEEEEEEEESBSSSSBCCEEEEECSCCTTCEEEEECSC T ss_pred CCEEEEECCCCCCCCCCCEEEEEEEECCEEEEEEEEEECCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCC T ss_conf 22014606887565367607999998998924799985589557560677756789759999986035667243203445 Q ss_pred CCCCEEEEEEEEC--CCEEEEEEEE----CCCCCCCCCEEEEEECCCCCEE-----EECCCCEEECCCCCEE------EE Q ss_conf 2886378999934--5238999983----4788632760899983899797-----4212521212448702------89 Q gi|254780160|r 195 EPGKIIDVTIQNR--AAKITFKLVS----EMGGEAVADTAWSILTASGDTV-----GESANASPSMVLSEGD------YT 257 (298) Q Consensus 195 ~~g~~~~~tv~~~--~~~~~~~~v~----~~~G~~l~ga~~~i~~~~g~~v-----t~~~G~~~~~~L~~G~------Y~ 257 (298) ... ..++.... ...+...++. ...|.+.+++.|+|+..+...- .+.++.+.+.+||.++ |+ T Consensus 176 ~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~tv~l~~~g~~~~~~t~~~~~~w~~~f~~l~~~~~g~~~~yt 253 (373) T 1d2p_A 176 MGN--LITTNKYTPETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYT 253 (373) T ss_dssp TTS--EEEEEECCCCEEEEEEEEEEESTTTTTSCCCSCEEEEEEETTEEEEEEEECGGGTSEEEEEEEESEETTEECCEE T ss_pred CCC--CEEEECCCCCEECCCCEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCEEECCCCCCCCCCCEEEEE T ss_conf 444--034100132102034417983788867734775799999799696679974178856962668766678368999 Q ss_pred EEEECC Q ss_conf 999538 Q gi|254780160|r 258 VIARNK 263 (298) Q Consensus 258 v~a~~~ 263 (298) +.+... T Consensus 254 v~e~~~ 259 (373) T 1d2p_A 254 VTEDHV 259 (373) T ss_dssp EEECCC T ss_pred EEEECC T ss_conf 975416 No 14 >1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Probab=98.47 E-value=4.4e-07 Score=62.46 Aligned_cols=79 Identities=13% Similarity=0.119 Sum_probs=66.9 Q ss_pred CCEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEEEE Q ss_conf 5238999983478863276089998389979742125212124487028999953882-467779997288504899974 Q gi|254780160|r 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVLMR 286 (298) Q Consensus 208 ~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~~~ 286 (298) ...+.+++.+..+|+||++|.+.|.+.+..++++.+|.|.. .|+||+|+|.++..++ ...+.+.|.+|+++.+++.|+ T Consensus 300 ~~~i~G~V~d~~~~~pi~~A~v~i~~~~~~~~td~~G~f~~-~l~~G~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~ 378 (380) T 1h8l_A 300 HRGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWR-LLVQGTYKVTASARGYDPVTKTVEVDSKGGVQVNFTLS 378 (380) T ss_dssp GCEEEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBCCEEEEEEECSSCEEECCEEEC T ss_pred CCEEEEEEEECCCCCCCCCEEEEEECCCCCEEECCCCCEEE-ECCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEEC T ss_conf 01189999989999876884999943667648889985899-60883799999983604579999990898299999974 Q ss_pred C Q ss_conf 1 Q gi|254780160|r 287 Q 287 (298) Q Consensus 287 ~ 287 (298) . T Consensus 379 ~ 379 (380) T 1h8l_A 379 R 379 (380) T ss_dssp B T ss_pred C T ss_conf 5 No 15 >3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} Probab=98.36 E-value=1.2e-06 Score=59.68 Aligned_cols=85 Identities=18% Similarity=0.146 Sum_probs=57.9 Q ss_pred CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCE-------EEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEE---- Q ss_conf 664379998615788777551899998389743-------566750567513521067617999961577854454---- Q gi|254780160|r 122 NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHK-------ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST---- 190 (298) Q Consensus 122 ~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~-------~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~---- 190 (298) ..+.+.+.+++.. .+.++++++|.|+..++.. ...+++..|...+.+|++|+|+|+|+++|.+|.... T Consensus 249 ~~g~~~~~K~d~~-~~~~L~Ga~F~l~~~~g~~v~~~~~~~t~~Td~~G~~~~~~L~~G~Y~l~EtkaP~GY~~~~~~~~ 327 (355) T 3kpt_A 249 TTGIIELTKIDSA-NKNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTKTS 327 (355) T ss_dssp CEEEEEEEEEETT-TCCBCSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEEECCEEECTTCCEEE T ss_pred ECCCEEEEEECCC-CCCCCCCCEEEEECCCCCEEEECCCEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCC T ss_conf 4152479997488-883018858999917999995057476899899988998999893599999978997435776444 Q ss_pred --------EEEECC-CCEEEEEEEEC Q ss_conf --------488428-86378999934 Q gi|254780160|r 191 --------VVKVEP-GKIIDVTIQNR 207 (298) Q Consensus 191 --------~i~V~~-g~~~~~tv~~~ 207 (298) .|+|.+ ++..++++.+. T Consensus 328 y~~~~~~i~~~i~~~~~~~~~t~~n~ 353 (355) T 3kpt_A 328 YQLLKDPIDVKISENNQTVKLTIENN 353 (355) T ss_dssp CCCCCSCEEEECBTTBCEEEEEEEEC T ss_pred EEECCCEEEEEEEECCEEEEEEEEEC T ss_conf 59749608999951992999999957 No 16 >2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, hormone processing, peptide modification; HET: NAG; 2.10A {Homo sapiens} Probab=98.18 E-value=3.7e-06 Score=56.43 Aligned_cols=78 Identities=17% Similarity=0.143 Sum_probs=62.1 Q ss_pred CEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEEEEC Q ss_conf 238999983478863276089998389979742125212124487028999953882-4677799972885048999741 Q gi|254780160|r 209 AKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVLMRQ 287 (298) Q Consensus 209 ~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~~~~ 287 (298) ..+.+++. +..|+||++|.+.|...+..+.|+.+|.|.. .|+||.|++.++.-++ ..++.++|..++...+++.|+. T Consensus 321 ~gi~G~V~-d~~g~pl~~A~V~v~g~~~~~~Td~~G~f~~-~l~~G~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~~ 398 (439) T 2nsm_A 321 QGIKGMVL-DQNYNNLANAVISVSGINHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPETVTVTVGPAEPTLVNFHLKR 398 (439) T ss_dssp CSEEEEEE-CTTSCBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEEEEEEECSSSCEECCEECEE T ss_pred CEEEEEEE-CCCCCCCCCEEEEEECCCCCEEECCCCCEEE-EECCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEECC T ss_conf 33589998-7789737854999977616638889973999-837962799999957335799999858982999999822 Q ss_pred H Q ss_conf 0 Q gi|254780160|r 288 K 288 (298) Q Consensus 288 ~ 288 (298) . T Consensus 399 ~ 399 (439) T 2nsm_A 399 S 399 (439) T ss_dssp C T ss_pred C T ss_conf 6 No 17 >2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A Probab=97.86 E-value=1.1e-07 Score=66.27 Aligned_cols=145 Identities=11% Similarity=0.010 Sum_probs=89.0 Q ss_pred CCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCEEE---------EEEECCCCEEEEE---- Q ss_conf 346759999953888762058898246856630226721899996157775278---------9980686136787---- Q gi|254780160|r 52 IDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKK---------ITVSSKEKNQKQV---- 118 (298) Q Consensus 52 ~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~~~---------vtV~~~~~~~~~~---- 118 (298) ..+++.|.++....+.......+++.+|......|.++.|+..+...+.++... +++.......... T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~y~~~e~~~~gy~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 257 (444) T 2x9x_A 178 AGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPLDPT 257 (444) T ss_dssp CCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEEEEECCCCCCCBCCC T ss_pred CCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCEEECCC T ss_conf 67504789983467602225787146750787513567427999974788501000026750699972144342050366 Q ss_pred -EECCCCEEEEEEEECCCCCCCCCEEEEEEECCCCC-------------------------------------------- Q ss_conf -51366437999861578877755189999838974-------------------------------------------- Q gi|254780160|r 119 -FILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNH-------------------------------------------- 153 (298) Q Consensus 119 -~~~~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~-------------------------------------------- 153 (298) .....+++.+.+.+..+ .++++++|.|+..++. T Consensus 258 ~~~~~~~~~~~~k~d~~~--~~l~ga~f~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (444) T 2x9x_A 258 EPKVVTYGKKFVKVNDKD--NRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQTQQ 335 (444) T ss_dssp CCEEECEEEEEEEECTTC--CBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTSCCC----- T ss_pred CCCEEECCEEEEEECCCC--CCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCEE T ss_conf 665796778999958999--883887899997789568987614653310000355452256741244023313543000 Q ss_pred ---------------------------------EEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEE---EEEECCC Q ss_conf ---------------------------------3566750567513521067617999961577854454---4884288 Q gi|254780160|r 154 ---------------------------------KALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST---VVKVEPG 197 (298) Q Consensus 154 ---------------------------------~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~---~i~V~~g 197 (298) ...++++..|...+.+|+||+|+|+|+.||.||.+.. .|+|.++ T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~~~~i~ftV~~~ 415 (444) T 2x9x_A 336 EKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTAT 415 (444) T ss_dssp -CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSCCCCSCEEEEECTT T ss_pred CEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEECC T ss_conf 30259999851445643466069999768984899999899985998988978489999789999397786489999689 Q ss_pred C Q ss_conf 6 Q gi|254780160|r 198 K 198 (298) Q Consensus 198 ~ 198 (298) . T Consensus 416 ~ 416 (444) T 2x9x_A 416 S 416 (444) T ss_dssp T T ss_pred C T ss_conf 6 No 18 >1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3 Probab=97.79 E-value=0.0018 Score=39.12 Aligned_cols=226 Identities=14% Similarity=0.065 Sum_probs=114.2 Q ss_pred EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEE--CCCCCEEEEEEEECCCCCEEEEEEECCCCE- Q ss_conf 27999998688775346759999953888762058898246856630--226721899996157775278998068613- Q gi|254780160|r 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSF--DLFPGDYLISASFGHVGVVKKITVSSKEKN- 114 (298) Q Consensus 38 ~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~--~L~pG~Y~v~~s~g~~~~~~~vtV~~~~~~- 114 (298) .+++++++.+..++++.|+...+-.............++++|..... ...+|.|.+.++++.......+.+..+... T Consensus 27 ~~tvtvtv~D~~Gnpv~~~~Vt~t~~~~~~~~~~t~~Td~~G~~tvt~t~~~~Gt~tvtat~~g~~~t~~~~~~~~~~~~ 106 (492) T 1cwv_A 27 AITVEFTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQSVDTHFVKGTIAA 106 (492) T ss_dssp CEEEEEEEECTTSCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTEEEEEEEEEECCCBCG T ss_pred CEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEECCCCEEEEEEEECCCCEEEEEEEEECCEECCEEEEEEECCCCC T ss_conf 67999999989989978988999978971214441241899799999957775699999998976210335898466643 Q ss_pred ---EEEE-----EECCCC--EEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCC---CEEEEECCCCEEEEEEE Q ss_conf ---6787-----513664--3799986157887775518999983897435667505675---13521067617999961 Q gi|254780160|r 115 ---QKQV-----FILNAG--GIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRS---GTLVRLGTNNYQITSHY 181 (298) Q Consensus 115 ---~~~~-----~~~~ag--~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~---~~~~~L~~G~Y~v~et~ 181 (298) .... ...... .+.....+..+.+++...+.|..- ... ....++...+ ..+....+|.|.+..+. T Consensus 107 ~~~~~~~~~~~~~a~g~~~~tvt~tv~D~~Gn~v~~~~V~~~~~--~~~-~~~~t~~~~G~~t~t~t~~~~G~~~vt~t~ 183 (492) T 1cwv_A 107 DKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTT--LGN-MGVITDHNDGTYSAPLTSTTLGVATVTVKV 183 (492) T ss_dssp GGCEEEEESSEEETTSSCCEEEEEECBBTTSCBCCSCCEEEEES--SSE-ECCCEECSSSEEEEEEECSSCEEEEEEEEE T ss_pred CEEEEEECCCCEECCCCCEEEEEEEEECCCCCCCCCCCCEEECC--CCC-CEEEEECCCCEEEEEEEECCCCEEEEEEEE T ss_conf 00147626762131463107999999868998345851001215--674-103676488607888840446347899998 Q ss_pred CCCCCE-EEEEEEECCCCE-----EEEEEEE------CCCEEEEEE-EECCCCCCCCCEEEEEECCCCC-----EEEECC Q ss_conf 577854-454488428863-----7899993------452389999-8347886327608999838997-----974212 Q gi|254780160|r 182 GKYNAI-VSTVVKVEPGKI-----IDVTIQN------RAAKITFKL-VSEMGGEAVADTAWSILTASGD-----TVGESA 243 (298) Q Consensus 182 a~~~~~-~~~~i~V~~g~~-----~~~tv~~------~~~~~~~~~-v~~~~G~~l~ga~~~i~~~~g~-----~vt~~~ 243 (298) ...... ....+.+..+.. ..+.... ......+++ +.+..|.++.+........++. .+++.. T Consensus 184 ~~~~~~~~s~~v~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~tvtvtv~D~~gn~v~~~~v~~~~~~g~~~~~~~~t~~~ 263 (492) T 1cwv_A 184 DGAAFSVPSVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQP 263 (492) T ss_dssp TTEEEEEEEEEEEEECCSSCCTTTCEEEESCSEEETTSCCCEEEEEECBCTTSCBCCSCCSEEEEEEESCCEECCCEECS T ss_pred CCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCC T ss_conf 58642000368999503433321124672366144177320579999814688713574479980699537777898899 Q ss_pred CC--EEECCCCCEEEEEEEECCCCE Q ss_conf 52--121244870289999538824 Q gi|254780160|r 244 NA--SPSMVLSEGDYTVIARNKERN 266 (298) Q Consensus 244 G~--~~~~~L~~G~Y~v~a~~~~~~ 266 (298) |. +......+|.+++.+...... T Consensus 264 g~~t~t~t~~~~G~~tvtat~~~~~ 288 (492) T 1cwv_A 264 DSYTATVVGNSVGDVTITPQVDTLI 288 (492) T ss_dssp SCEEEEEECSSCEEEEEEEEETTEE T ss_pred CEEEEEEECCCCCEEEEEEEECCCC T ss_conf 8699999766420399999991621 No 19 >2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae} Probab=97.69 E-value=0.00015 Score=46.08 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=40.2 Q ss_pred CCCCCCCCCEEEEEECCCC-CE-----EEECCCCEEECCCCCEEEEEEEECCCCEEEEEE Q ss_conf 4788632760899983899-79-----742125212124487028999953882467779 Q gi|254780160|r 218 EMGGEAVADTAWSILTASG-DT-----VGESANASPSMVLSEGDYTVIARNKERNYSREF 271 (298) Q Consensus 218 ~~~G~~l~ga~~~i~~~~g-~~-----vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~~f 271 (298) ...+.+|++|.|.|++.++ .. +++.+|.+.+.+|..|.|.+++..+|.+|+..+ T Consensus 170 ~~~~~~laga~F~l~~~~~~~~~~~~~~T~~~G~~~~~GL~~g~Y~l~EtkAP~GY~~~~ 229 (262) T 2x9z_A 170 GAPIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADY 229 (262) T ss_dssp SCBCCCCSCEEEEEEETTTCCEEEEEEECTTCSEEEECSCCTTSCEEEEECCBTTBEEEE T ss_pred CCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCC T ss_conf 643345564148999736881887899947844599832578888999997889854212 No 20 >3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X* Probab=97.62 E-value=0.00012 Score=46.60 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=42.3 Q ss_pred CCCCCCCCCEEEEEEECCC---------------------------CCCCEEEEEEECCCCEEEECCCCCEEEEEEEECC Q ss_conf 8877534675999995388---------------------------8762058898246856630226721899996157 Q gi|254780160|r 47 ENSTSIDSGVSWHIFDSIS---------------------------NKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGH 99 (298) Q Consensus 47 ~~~~~~~~G~~~~vy~~~~---------------------------~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~ 99 (298) ..+..+++|+.|+||.-.. +.......+|+++|...+.+|++|.|.|+|+.++ T Consensus 28 ~~~~~~l~G~~F~~~kv~~id~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tT~~~G~~~f~~L~~G~Y~v~Et~ap 107 (436) T 3hr6_A 28 SIGLPKVDGMSFTLYRVNEIDLTTQAGWDAASKIKLEELYTNGHPTDKVTKVATKKTEGGVAKFDNLTPALYLVVQELNG 107 (436) T ss_dssp --CCCBCSSCEEEEEEETTCCTTSHHHHHHHTTCCHHHHEETTEECTTEEEEEEEECBTTBEEEEEECSEEEEEEECSCS T ss_pred CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECC T ss_conf 77898679968999991353344865644431145000014553467503345667799849989868787999998458 Q ss_pred CCCE Q ss_conf 7752 Q gi|254780160|r 100 VGVV 103 (298) Q Consensus 100 ~~~~ 103 (298) .++. T Consensus 108 ~gy~ 111 (436) T 3hr6_A 108 AEAV 111 (436) T ss_dssp SSCE T ss_pred CCCE T ss_conf 8847 No 21 >2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, hormone processing, peptide modification; HET: NAG; 2.10A {Homo sapiens} Probab=97.55 E-value=0.00042 Score=43.14 Aligned_cols=89 Identities=11% Similarity=-0.002 Sum_probs=56.9 Q ss_pred CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCEEE Q ss_conf 66437999861578877755189999838974356675056751352106761799996157785445448842886378 Q gi|254780160|r 122 NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIID 201 (298) Q Consensus 122 ~ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i~V~~g~~~~ 201 (298) ...++.....+..+. |+.++.+.+ .+......++..|.+ ...|+||+|+|+.++- .+......|+|..++... T Consensus 319 ~~~gi~G~V~d~~g~--pl~~A~V~v---~g~~~~~~Td~~G~f-~~~l~~G~y~l~vs~~-Gy~~~~~~v~v~~~~~~~ 391 (439) T 2nsm_A 319 VHQGIKGMVLDQNYN--NLANAVISV---SGINHDVTSGDHGDY-FRLLLPGIYTVSATAP-GYDPETVTVTVGPAEPTL 391 (439) T ss_dssp TSCSEEEEEECTTSC--BCTTCEEEE---TTEEEEEECCTTSEE-EECCCSEEEEEEEECT-TEECEEEEEEECSSSCEE T ss_pred HHCEEEEEEECCCCC--CCCCEEEEE---ECCCCCEEECCCCCE-EEEECCCCEEEEEEEE-CCCCEEEEEEECCCCEEE T ss_conf 513358999877897--378549999---776166388899739-9983796279999995-733579999985898299 Q ss_pred EEEEECCCEEEEEEEE Q ss_conf 9999345238999983 Q gi|254780160|r 202 VTIQNRAAKITFKLVS 217 (298) Q Consensus 202 ~tv~~~~~~~~~~~v~ 217 (298) +.+.+......+.-|. T Consensus 392 ~~~~L~~~~~~l~~V~ 407 (439) T 2nsm_A 392 VNFHLKRSIPQVSPVR 407 (439) T ss_dssp CCEECEEC-------- T ss_pred EEEEECCCCCCCCEEE T ss_conf 9999822656563499 No 22 >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X Probab=97.46 E-value=0.00085 Score=41.18 Aligned_cols=49 Identities=18% Similarity=0.192 Sum_probs=40.6 Q ss_pred CCCCCCCCEEEEEECCCCCEE----EECCCCEEECCCCCEEEEEEEECCCCEEE Q ss_conf 788632760899983899797----42125212124487028999953882467 Q gi|254780160|r 219 MGGEAVADTAWSILTASGDTV----GESANASPSMVLSEGDYTVIARNKERNYS 268 (298) Q Consensus 219 ~~G~~l~ga~~~i~~~~g~~v----t~~~G~~~~~~L~~G~Y~v~a~~~~~~y~ 268 (298) .+..+|+|+.|.|++.+|.++ |+++|.|.+.+|++|+|+| +-..|.+|. T Consensus 324 ~~e~~~~~~~~~l~~~~g~~~~~~tTd~~G~y~f~~l~~g~Y~v-e~~~P~gy~ 376 (429) T 3irp_X 324 DSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLV-EFVMPEGYI 376 (429) T ss_dssp CSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEE-EECCCTTEE T ss_pred CCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCEEE-EEECCCCCE T ss_conf 88867486799999089989968997998769978768962799-998789987 No 23 >2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae} Probab=97.37 E-value=0.00049 Score=42.71 Aligned_cols=61 Identities=11% Similarity=-0.043 Sum_probs=46.5 Q ss_pred EEECCCCCCCCCEEEEEEECCCCC-E--EEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEE Q ss_conf 861578877755189999838974-3--566750567513521067617999961577854454 Q gi|254780160|r 130 SIYKPGSPIVDDELTFSIYSNPNH-K--ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST 190 (298) Q Consensus 130 ~~~~~~~~~~~~~~~f~i~~~~~~-~--~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~ 190 (298) .........+++++.|.++...+. . ....++..|...+.+|..|+|+++|+++|.||.+.. T Consensus 166 ~~~~~~~~~~laga~F~l~~~~~~~~~~~~~~T~~~G~~~~~GL~~g~Y~l~EtkAP~GY~~~~ 229 (262) T 2x9z_A 166 VDATGAPIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADY 229 (262) T ss_dssp ECTTSCBCCCCSCEEEEEEETTTCCEEEEEEECTTCSEEEECSCCTTSCEEEEECCBTTBEEEE T ss_pred ECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCC T ss_conf 0035643345564148999736881887899947844599832578888999997889854212 No 24 >1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Probab=97.23 E-value=0.0017 Score=39.31 Aligned_cols=79 Identities=14% Similarity=-0.021 Sum_probs=52.7 Q ss_pred CEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCEEEEE Q ss_conf 43799986157887775518999983897435667505675135210676179999615778544544884288637899 Q gi|254780160|r 124 GGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVT 203 (298) Q Consensus 124 g~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i~V~~g~~~~~t 203 (298) ...+...+.+...+.|+.++.+.+ .+......++..|.+ ...|+||+|.|..++ +.+......|.|.+++.+.+. T Consensus 300 ~~~i~G~V~d~~~~~pi~~A~v~i---~~~~~~~~td~~G~f-~~~l~~G~y~l~vs~-~Gy~~~~~~v~v~~~~~~~~~ 374 (380) T 1h8l_A 300 HRGIWGFVLDATDGRGILNATISV---ADINHPVTTYKDGDY-WRLLVQGTYKVTASA-RGYDPVTKTVEVDSKGGVQVN 374 (380) T ss_dssp GCEEEEEEEETTTCSBCTTCEEEE---TTEEEEEECCTTSEE-EECCCSEEEEEEEEC-TTBCCEEEEEEECSSCEEECC T ss_pred CCEEEEEEEECCCCCCCCCEEEEE---ECCCCCEEECCCCCE-EEECCCEEEEEEEEE-CCCCCEEEEEEEECCCEEEEE T ss_conf 011899999899998768849999---436676488899858-996088379999998-360457999999089829999 Q ss_pred EEEC Q ss_conf 9934 Q gi|254780160|r 204 IQNR 207 (298) Q Consensus 204 v~~~ 207 (298) +.+. T Consensus 375 ~~L~ 378 (380) T 1h8l_A 375 FTLS 378 (380) T ss_dssp EEEC T ss_pred EEEC T ss_conf 9974 No 25 >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X Probab=97.21 E-value=0.00049 Score=42.72 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=42.0 Q ss_pred CCCCCCCEEEEEEECCCCCEEEE-EEECCCCCEEEEECCCCEEEEEEECCCCCEEEE Q ss_conf 88777551899998389743566-750567513521067617999961577854454 Q gi|254780160|r 135 GSPIVDDELTFSIYSNPNHKALL-ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST 190 (298) Q Consensus 135 ~~~~~~~~~~f~i~~~~~~~~~~-~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~ 190 (298) +...++++++|.|+...+..... .++..|.+.+.+|++|.|+| |..+|.+|.... T Consensus 324 ~~e~~~~~~~~~l~~~~g~~~~~~tTd~~G~y~f~~l~~g~Y~v-e~~~P~gy~~t~ 379 (429) T 3irp_X 324 DSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLV-EFVMPEGYIPTQ 379 (429) T ss_dssp CSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEE-EECCCTTEEECC T ss_pred CCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCEEE-EEECCCCCEECC T ss_conf 88867486799999089989968997998769978768962799-998789987717 No 26 >3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} Probab=97.13 E-value=0.0015 Score=39.64 Aligned_cols=77 Identities=14% Similarity=0.092 Sum_probs=54.8 Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCC-EEEECCCCEEECCCCCEEEEEEEECCCCEE--EEEEEEE--ECCCCEEEEEE Q ss_conf 899998347886327608999838997-974212521212448702899995388246--7779997--28850489997 Q gi|254780160|r 211 ITFKLVSEMGGEAVADTAWSILTASGD-TVGESANASPSMVLSEGDYTVIARNKERNY--SREFSVL--TGKSTIVEVLM 285 (298) Q Consensus 211 ~~~~~v~~~~G~~l~ga~~~i~~~~g~-~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y--~~~ftV~--~g~~~~veV~~ 285 (298) ++-..|.+..|.||++|.+.|.+.+.. +.+..+|.|-. -|+||.|.|.++..++.. .+.+.|. .+..+.+++++ T Consensus 338 Gi~G~V~d~~g~pi~~a~i~v~g~~~~~~~t~~~G~y~r-~l~pG~Y~v~~~a~GY~~~~~~~v~v~~~~~~~~~~~f~L 416 (435) T 3mn8_A 338 GIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWR-LLTPGLYSVHASAFGYQTSAPQQVRVTNDNQEALRLDFKL 416 (435) T ss_dssp SEEEEEECSSSCBCTTCEEEETTCTTSCEECCTTCEEEE-CCCSEEEEEEEEBTTBCCCCCEEEEECCCSSSCEECCEEC T ss_pred CCEEEEECCCCCCCCCEEEEEECCCCCCEECCCCCCEEE-ECCCEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEE T ss_conf 407999667899788749999655177116688972899-7178047999998175577715899965899618998897 Q ss_pred ECH Q ss_conf 410 Q gi|254780160|r 286 RQK 288 (298) Q Consensus 286 ~~~ 288 (298) ... T Consensus 417 ~p~ 419 (435) T 3mn8_A 417 APV 419 (435) T ss_dssp CBC T ss_pred ECC T ss_conf 148 No 27 >1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Probab=97.03 E-value=0.0019 Score=38.87 Aligned_cols=65 Identities=8% Similarity=-0.012 Sum_probs=47.2 Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCE--EEECCCCEEECCCCCEEEEEEEECCCCE-EEEEEEEEEC Q ss_conf 8999983478863276089998389979--7421252121244870289999538824-6777999728 Q gi|254780160|r 211 ITFKLVSEMGGEAVADTAWSILTASGDT--VGESANASPSMVLSEGDYTVIARNKERN-YSREFSVLTG 276 (298) Q Consensus 211 ~~~~~v~~~~G~~l~ga~~~i~~~~g~~--vt~~~G~~~~~~L~~G~Y~v~a~~~~~~-y~~~ftV~~g 276 (298) ++-..|.+..|+||++|.+++.+.++.+ .+...|.|-. -|+||.|.+.++..++. ..+.++|..+ T Consensus 297 Gi~G~V~d~~g~pi~~A~i~v~~~~~~~~~~t~~~G~y~r-lL~pG~y~v~~sa~Gy~~~~~~v~v~~~ 364 (426) T 1uwy_A 297 GVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYL-LLLPGSYIINVTVPGHDPHITKVIIPEK 364 (426) T ss_dssp SEEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSCCEEEEEEECSS T ss_pred CCEEEEECCCCCCCCCEEEEEECCCCCCCEECCCCEEEEE-ECCCEEEEEEEEECCCCCEEEEEEECCC T ss_conf 8559999689984786599993565631100288802999-8578068999998077652489997878 No 28 >1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 Probab=96.38 E-value=0.024 Score=31.81 Aligned_cols=75 Identities=15% Similarity=0.097 Sum_probs=39.5 Q ss_pred CCEEEEEEEECCCCCCCCCEEEEEECCCCC--EEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEE Q ss_conf 523899998347886327608999838997--9742125212124487028999953882-4677799972885048999 Q gi|254780160|r 208 AAKITFKLVSEMGGEAVADTAWSILTASGD--TVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVL 284 (298) Q Consensus 208 ~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~--~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~ 284 (298) .|.+..++.-.+.|.+ ..|.+.+.+-. ..++++|.|.+.++.||+|++.+-.++. .++++++|.+|.+..+.+. T Consensus 257 RG~V~G~~~l~~~g~~---~~~~~~~~~yQyWt~ad~~G~Fti~~VrpGtY~L~ay~~~~~~~~~~VtV~aG~~~~~~~~ 333 (508) T 1nkg_A 257 RGKVAGTASGADSSMD---WVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVTVSAGSTTTKNIS 333 (508) T ss_dssp CBEEEEEEESSCTTSC---EEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEEECTTCEEECCEE T ss_pred CCEEEEEEECCCCCCC---CEEEEECCCEEEEEEECCCCCEEECCCCCCEEEEEEEECCEEEEEEEEEECCCCCCCCCEE T ss_conf 6079999971478887---4788733660789990688857707702660689999786288986799927976531157 Q ss_pred E Q ss_conf 7 Q gi|254780160|r 285 M 285 (298) Q Consensus 285 ~ 285 (298) . T Consensus 334 ~ 334 (508) T 1nkg_A 334 G 334 (508) T ss_dssp C T ss_pred E T ss_conf 0 No 29 >1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Probab=96.12 E-value=0.019 Score=32.37 Aligned_cols=80 Identities=11% Similarity=0.049 Sum_probs=46.0 Q ss_pred CCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCC---- Q ss_conf 6437999861578877755189999838974356675056751352106761799996157785445448842886---- Q gi|254780160|r 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGK---- 198 (298) Q Consensus 123 ag~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~~i~V~~g~---- 198 (298) ..|+.....+..+.+++ +|.+.+-.- ......++...+...--|+||+|.|..++ +.+.+....++|..+. T Consensus 295 ~~Gi~G~V~d~~g~pi~--~A~i~v~~~--~~~~~~~t~~~G~y~rlL~pG~y~v~~sa-~Gy~~~~~~v~v~~~~~~~~ 369 (426) T 1uwy_A 295 HLGVKGQVFDQNGNPLP--NVIVEVQDR--KHICPYRTNKYGEYYLLLLPGSYIINVTV-PGHDPHITKVIIPEKSQNFS 369 (426) T ss_dssp GCSEEEEEECTTSCBCC--SCEEEETTC--CCSSCCBCCTTCEEEECCCSEEEEEEEEC-SSSCCEEEEEEECSSCSSSS T ss_pred HCCCEEEEECCCCCCCC--CEEEEEECC--CCCCCEECCCCEEEEEECCCEEEEEEEEE-CCCCCEEEEEEECCCCCCCC T ss_conf 45855999968998478--659999356--56311002888029998578068999998-07765248999787875453 Q ss_pred EEEEEEEEC Q ss_conf 378999934 Q gi|254780160|r 199 IIDVTIQNR 207 (298) Q Consensus 199 ~~~~tv~~~ 207 (298) .+...+.+. T Consensus 370 ~~~~df~l~ 378 (426) T 1uwy_A 370 ALKKDILLP 378 (426) T ss_dssp CEECCEECS T ss_pred EEEEEEEEC T ss_conf 057748964 No 30 >3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343} Probab=94.87 E-value=0.16 Score=26.51 Aligned_cols=65 Identities=20% Similarity=0.363 Sum_probs=32.1 Q ss_pred CCCCCCCCCE--EEEEECCCC-----CEEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEEEE Q ss_conf 4788632760--899983899-----79742125212124487028999953882-467779997288504899974 Q gi|254780160|r 218 EMGGEAVADT--AWSILTASG-----DTVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVLMR 286 (298) Q Consensus 218 ~~~G~~l~ga--~~~i~~~~g-----~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~~~ 286 (298) +..|+|++|| .|+|+|-.. ...||+.|..++. .-.|+--+.|.++++ ++.+ +..|++..+++.++ T Consensus 9 d~~G~PV~gA~V~FkvyNYAEfy~va~~~TD~~G~a~lt-~G~Gdmlv~A~k~g~~g~~k---~~~~k~~~~~l~L~ 81 (82) T 3e8v_A 9 DAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFGYSK---LSFGKDNELKITLD 81 (82) T ss_dssp CTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEEEEE---EEETTBCEEEEECC T ss_pred CCCCCCCCCCEEEEEEECHHHEEEEEEEEECCCCEEEEE-ECCCCEEEEEECCCEEEEEE---EEECCCCEEEEEEC T ss_conf 589999899999999960275267201288788609999-55875999998599989999---86078845999945 No 31 >1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.3.7.1 Probab=94.76 E-value=0.054 Score=29.49 Aligned_cols=45 Identities=9% Similarity=0.079 Sum_probs=22.3 Q ss_pred EEEECCCCEEECCCCCEEEEEEEEC-------CCC-----EEEEEEEEEECCCCEEE Q ss_conf 9742125212124487028999953-------882-----46777999728850489 Q gi|254780160|r 238 TVGESANASPSMVLSEGDYTVIARN-------KER-----NYSREFSVLTGKSTIVE 282 (298) Q Consensus 238 ~vt~~~G~~~~~~L~~G~Y~v~a~~-------~~~-----~y~~~ftV~~g~~~~ve 282 (298) ..+|..|.|.+.+||+|+|.+++.- +.. ...+.++|+.|++..|. T Consensus 111 T~~D~~GrF~F~~Lp~G~Yyl~a~v~w~~~~~g~~~~qgg~lmkrVtv~ggqt~~v~ 167 (170) T 1xpn_A 111 ATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVL 167 (170) T ss_dssp EEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEECCSSCEEEE T ss_pred EEECCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEE T ss_conf 786587608765789964899998875245788987344179999996599389988 No 32 >1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.3.7.1 Probab=93.24 E-value=0.22 Score=25.52 Aligned_cols=50 Identities=16% Similarity=0.158 Sum_probs=31.0 Q ss_pred EEEEEECCCCCEEEEECCCCEEEEEEE---C-CCCCEE------EEEEEECCCCEEEEEE Q ss_conf 566750567513521067617999961---5-778544------5448842886378999 Q gi|254780160|r 155 ALLITDKVRSGTLVRLGTNNYQITSHY---G-KYNAIV------STVVKVEPGKIIDVTI 204 (298) Q Consensus 155 ~~~~t~~~~~~~~~~L~~G~Y~v~et~---a-~~~~~~------~~~i~V~~g~~~~~tv 204 (298) ....+|+.|.+.+.+||+|.|+|.... + +.+... -.-|+|..|++.++++ T Consensus 109 r~T~~D~~GrF~F~~Lp~G~Yyl~a~v~w~~~~~g~~~~qgg~lmkrVtv~ggqt~~v~L 168 (170) T 1xpn_A 109 REATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLL 168 (170) T ss_dssp EEEEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEECCSSCEEEEE T ss_pred EEEEECCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEE T ss_conf 267865876087657899648999988752457889873441799999965993899884 No 33 >1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 Probab=90.10 E-value=0.72 Score=22.25 Aligned_cols=129 Identities=12% Similarity=0.130 Sum_probs=60.9 Q ss_pred CCEEEEEEECCCCCCCEEEEEEECCCC-EEEECCCC---C---EEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEE Q ss_conf 675999995388876205889824685-66302267---2---1899996157775278998068613678751366437 Q gi|254780160|r 54 SGVSWHIFDSISNKKNTLSTTKKIIGG-KVSFDLFP---G---DYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGI 126 (298) Q Consensus 54 ~G~~~~vy~~~~~~~g~~~~tt~~~G~-~~~~~L~p---G---~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~~~ag~~ 126 (298) +-+.++||.. ....+... ++.+++- ..+.+||- | .|.|.+...+ ++...+. + .............+ T Consensus 23 ~si~v~L~~n-g~~~~~~~-~~~~~~w~~tf~~Lpk~d~G~~i~Y~V~E~~v~-gY~~~v~---g-~~itnt~~~~~~~i 95 (187) T 1d2o_A 23 EKVSVNLLAN-GEKVKTLD-VTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVK-DYTTDIN---G-TTITNKYTPGETSA 95 (187) T ss_dssp SEEEEEEEET-TEEEEEEE-EEGGGTTEEEEEEEESEETTEECCEEEEECCCT-TEEEEEE---T-TEEEEEECTTEEEE T ss_pred CEEEEEEEEC-CEECCEEE-ECCCCCCEEEECCCCCCCCCCEEEEEEEEECCC-CCEEEEC---C-EEEEECCCCCCEEE T ss_conf 7699999879-91922088-547898489985650137998699999971469-8262303---3-58982123210004 Q ss_pred EEEEEECCCC---CCCCCEEEEEEECCCCCEEEE-EEECCC--CCEEEEECCC------CEEEEEEECCCCCEEE Q ss_conf 9998615788---777551899998389743566-750567--5135210676------1799996157785445 Q gi|254780160|r 127 RLYSIYKPGS---PIVDDELTFSIYSNPNHKALL-ITDKVR--SGTLVRLGTN------NYQITSHYGKYNAIVS 189 (298) Q Consensus 127 ~~~~~~~~~~---~~~~~~~~f~i~~~~~~~~~~-~t~~~~--~~~~~~L~~G------~Y~v~et~a~~~~~~~ 189 (298) .+.++-.++. ...+..++|.||.++...... .....+ ...+.+||.. .|+|+|...|.||..+ T Consensus 96 ~v~K~W~d~~~~~~~rP~~i~v~L~~~g~~~~~~~~l~~~~~W~~~f~~Lp~~~~G~~i~Y~V~E~~~~~GY~~~ 170 (187) T 1d2o_A 96 TVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTH 170 (187) T ss_dssp EEEEEEESSTTSSSCCCSCEEEEEEETTEEEEEEEEESGGGTTEEEEEEEESEETTEECCEEEEECSCCTTEEEE T ss_pred EEEEECCCCCCCCCCCCCCEEEEEEECCEEECEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEE T ss_conf 667523589876676887489999989877020899717896799977876347997899999994679995999 No 34 >1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N* Probab=88.81 E-value=0.89 Score=21.63 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=43.3 Q ss_pred CCCCCCEEEEEECCCCCE---EEECCCCEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCEEEEE Q ss_conf 863276089998389979---7421252121244870289999538824677799972885048999 Q gi|254780160|r 221 GEAVADTAWSILTASGDT---VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVL 284 (298) Q Consensus 221 G~~l~ga~~~i~~~~g~~---vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~~ftV~~g~~~~veV~ 284 (298) .+-++||.+.|...+..+ ++|.-|-|.+..|..|.|.+.++..++.+... .+.-++...+-.+ T Consensus 207 ~~~~~~a~~~l~~~~~~~~~~~~d~fg~f~~~~~~~g~y~~~i~~~g~~~~~~-~~~~~~s~~~g~~ 272 (274) T 1ti6_B 207 GDCFEGAKVVLKSGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGKSYSDT-VVIDDKSVDLGFI 272 (274) T ss_dssp TEECTTCEEEEEETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTEEEEEE-EEESSSCEEEEEE T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCEEE-EEECCCCCEECCE T ss_conf 34017702477169978767225786664765634750699997278760467-8852788504305 No 35 >2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-sandwich, mixed alpha/beta structure; 1.8A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B* Probab=87.09 E-value=1.1 Score=20.96 Aligned_cols=59 Identities=10% Similarity=0.026 Sum_probs=43.6 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC-----------------CCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 023279999986887753467599999538887-----------------62058898246856630226721899 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK-----------------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~-----------------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) .++.|.++.++.+..+.++.|+...|+..+.+. .+.=...|+++|.+.+.-+.||.|.. T Consensus 75 ~Ge~i~v~GrV~D~~g~Pv~~A~VEIWQada~G~Y~~~~d~~~~~~d~~f~g~Gr~~TD~~G~y~F~TI~PG~Yp~ 150 (241) T 2bum_B 75 IGERVIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW 150 (241) T ss_dssp SSCEEEEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC T ss_conf 8787999999988999896886799985689961578766555667887552389996999869999847843168 No 36 >3pcg_M Protocatechuate 3,4-dioxygenase; iron, nonheme, metalloprotein, oxidoreductase; HET: 4HP; 1.96A {Pseudomonas putida} SCOP: b.3.6.1 PDB: 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 1ykp_B* 1yko_B* 3pcd_M 1ykn_B* 1ykm_B* 1ykk_B* 1ykl_B* Probab=83.95 E-value=1.6 Score=20.00 Aligned_cols=59 Identities=12% Similarity=0.074 Sum_probs=43.3 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCC-----------------CEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 0232799999868877534675999995388876-----------------2058898246856630226721899 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKK-----------------NTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~-----------------g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) .++.|.++.++.+..+.++.|+...|+..+.... +.=...|+++|.+.+.-+.||.|-. T Consensus 74 ~G~~i~v~GrV~D~~g~Pv~~A~VEiWQada~G~Y~~~~d~~~~~~d~~f~~rGr~~Td~~G~y~F~TI~PG~Yp~ 149 (238) T 3pcg_M 74 IGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPW 149 (238) T ss_dssp SSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCC T ss_conf 8557999999985999882886799986799954268666656666877322799970899819999958866457 No 37 >2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae} Probab=83.80 E-value=1.6 Score=19.96 Aligned_cols=224 Identities=15% Similarity=0.119 Sum_probs=102.5 Q ss_pred CCEEEEEEEE-CCCCCCCCCC--EEEEEEECCCCCCCEEEEEEECCCCEEE-ECC----CCCEEEEEEEECC-CCCEEEE Q ss_conf 2327999998-6887753467--5999995388876205889824685663-022----6721899996157-7752789 Q gi|254780160|r 36 AQRITCEARL-TENSTSIDSG--VSWHIFDSISNKKNTLSTTKKIIGGKVS-FDL----FPGDYLISASFGH-VGVVKKI 106 (298) Q Consensus 36 ~~~i~l~a~~-~~~~~~~~~G--~~~~vy~~~~~~~g~~~~tt~~~G~~~~-~~L----~pG~Y~v~~s~g~-~~~~~~v 106 (298) ++.+.+.+.. ..+..++.++ +.+.|+++.+....+...+++..|.+.. |.| +.|.|.|.+.+.. ....+.+ T Consensus 114 GqtV~~r~~~~~~~~~p~~~~~~v~v~i~dp~G~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~~tI~v~~~~~~~~s~~F 193 (1325) T 2pn5_A 114 GDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTF 193 (1325) T ss_dssp TCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEE T ss_pred CCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEE T ss_conf 98999999999998860788933899999899989999996618998899986889998871179999989996999999 Q ss_pred EEECCCCEEEEEEE------CCCC---EEEEEEEECCCCCCCCCEEEEEEECCCCC-EE--EEEEECCCCCEEE----EE Q ss_conf 98068613678751------3664---37999861578877755189999838974-35--6675056751352----10 Q gi|254780160|r 107 TVSSKEKNQKQVFI------LNAG---GIRLYSIYKPGSPIVDDELTFSIYSNPNH-KA--LLITDKVRSGTLV----RL 170 (298) Q Consensus 107 tV~~~~~~~~~~~~------~~ag---~~~~~~~~~~~~~~~~~~~~f~i~~~~~~-~~--~~~t~~~~~~~~~----~L 170 (298) .|..=..-..++.+ ...+ .+.+.+..-.|.+..+ .+.+.++..+.. .. ....++.+...+. .+ T Consensus 194 ~VeeyvlP~feV~i~~~~~~~~~~~~i~~~v~A~Y~~G~PV~G-~~~v~~~~~~~~~~~~~~~~~dg~g~~~~~~~~~~~ 272 (1325) T 2pn5_A 194 EVKEYVLSTFDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQG-VAKVELYLDDDKLKLKKELTVYGKGQVELRFDNFAM 272 (1325) T ss_dssp EECCSCCCCEEEEEEESSCCBGGGCEEEEEEEEEESSSCBCEE-EEEEEEEETTTTEEEEEEEEEESEEEEEEECSSCCC T ss_pred EEEEEECCCEEEEEECCCEEECCCCEEEEEEEEEECCCCCEEE-EEEEEEEECCCCEEECCEEEEEEEEEEEEECCCCCC T ss_conf 9999778958999966867706899699999999789981887-999999994784483338976117999997474344 Q ss_pred CCC--CEEEEEEE--CCCCCEEEE--EEEECCCCEEEEEEEEC------C--CEEEEEEEECCCCCCCCCEEEEEECCCC Q ss_conf 676--17999961--577854454--48842886378999934------5--2389999834788632760899983899 Q gi|254780160|r 171 GTN--NYQITSHY--GKYNAIVST--VVKVEPGKIIDVTIQNR------A--AKITFKLVSEMGGEAVADTAWSILTASG 236 (298) Q Consensus 171 ~~G--~Y~v~et~--a~~~~~~~~--~i~V~~g~~~~~tv~~~------~--~~~~~~~v~~~~G~~l~ga~~~i~~~~g 236 (298) .+. .|++..+. ...+..... .+.+.... ..+.+... . ..+.+.+ ....|+|+++..+.+..... T Consensus 273 ~~~~~~~~v~~~v~e~~tg~~~~~~~~v~v~~~~-~~i~~~~~~~~~~pg~~~~~~v~v-~~~dG~P~~~~~v~v~~~~~ 350 (1325) T 2pn5_A 273 DADQQDVPVKVSFVEQYTNRTVVKQSQITVYRYA-YRVELIKESPQFRPGLPFKCALQF-THHDGTPAKGISGKVEVSDV 350 (1325) T ss_dssp SSSEEEEEEEEEEEETTTCCEEEEEEEEEEESSS-CEEEEEESSSSBCTTSCEEEEEEE-ECTTSCBCTTCEEEEEEGGG T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEEEEEEEECC-EEEEEEECCCEECCCCCEEEEEEE-ECCCCCCCCCCEEEEEEEEE T ss_conf 6777379999999996799599999999987044-599999588806699908999999-97999997674379999401 Q ss_pred C----EEEECCCCEEE-CCCCCEEEEEEEEC Q ss_conf 7----97421252121-24487028999953 Q gi|254780160|r 237 D----TVGESANASPS-MVLSEGDYTVIARN 262 (298) Q Consensus 237 ~----~vt~~~G~~~~-~~L~~G~Y~v~a~~ 262 (298) . ..++.+|.+.. ..+++|.|.+.... T Consensus 351 ~~~~~~~~d~~G~~~~~i~~~~g~~~l~~~~ 381 (1325) T 2pn5_A 351 RFETTTTSDNDGLIKLELQPSEGTEQLSIHF 381 (1325) T ss_dssp TEEEEEECCTTSEEEEEECCCTTCCEEEEEE T ss_pred EEEEEEEECCCEEEEEEEECCCCCEEEEEEE T ss_conf 7999999714568999998998877999999 No 38 >1s9a_A Pyrocatechase, chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGP TAM; 2.47A {Rhodococcus opacus} SCOP: b.3.6.1 Probab=83.51 E-value=1.7 Score=19.88 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=36.3 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC-------------CCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 023279999986887753467599999538887-------------62058898246856630226721899 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK-------------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~-------------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) .++.+.++.++.+..+.++.||...|+..+... .++=...|+++|.+.+.-+.||.|.+ T Consensus 100 ~G~~l~v~G~V~D~~g~Pv~~A~veiWqad~~G~Y~~~~~~~~~~~~~rG~~~Td~dG~y~f~Ti~P~~Y~i 171 (257) T 1s9a_A 100 PGDRMRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEI 171 (257) T ss_dssp SSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCTTSCTTSCSSCCSEEEECCCTTSEEEEEEECCCCEEC T ss_pred CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC T ss_conf 987899999999799988378589999759997314657776656567204887899729999978766677 No 39 >1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex} Probab=80.95 E-value=2.1 Score=19.28 Aligned_cols=59 Identities=12% Similarity=0.145 Sum_probs=37.5 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC-----------CCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 023279999986887753467599999538887-----------62058898246856630226721899 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK-----------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~-----------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) .++.+.++.+..+..++++.||...|+..+... .++=...|+++|.+.+.-+.|+-|.+ T Consensus 130 ~G~~l~v~G~V~D~~G~Pi~gA~veiWqad~~G~Y~~~~~~~~~~~rGr~~Td~dG~y~f~Ti~P~~Y~i 199 (293) T 1tmx_A 130 AGEPCWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI 199 (293) T ss_dssp CSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC T ss_conf 9888999999988998996781789985289983445767988666458877899848999984457678 No 40 >3pcg_A Protocatechuate 3,4-dioxygenase; iron, nonheme, metalloprotein, oxidoreductase; HET: 4HP; 1.96A {Pseudomonas putida} SCOP: b.3.6.1 PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 3pca_A* 3pcb_A* 1ykk_A* 3pcd_A 3pce_A* 3pcf_A* 3pcc_A* 3pch_A* 3pci_A* 3pcj_A* 3pck_A* 3pcl_A* 3pcm_A* 3pcn_A* Probab=80.62 E-value=2.1 Score=19.21 Aligned_cols=58 Identities=10% Similarity=0.052 Sum_probs=38.2 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCC-------------EEEEEEECCCCEEEECCCCCEEE Q ss_conf 02327999998688775346759999953888762-------------05889824685663022672189 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKN-------------TLSTTKKIIGGKVSFDLFPGDYL 92 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g-------------~~~~tt~~~G~~~~~~L~pG~Y~ 92 (298) .++.|.|+.++.+....++.|+...|+..+..... .-..+++++|.+.+.-+.||-|. T Consensus 45 ~G~~i~v~G~V~D~~g~Pi~~a~veiWqad~~G~Y~~~~~~~~~~~~~~g~~~td~~G~y~f~Ti~Pg~Y~ 115 (200) T 3pcg_A 45 PGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVN 115 (200) T ss_dssp SSCEEEEEEEEECTTSCBCTTCEEEEECCCTTSCCCCBCCTTSSBCSEEEEECCSSSCEEEEEEECCCCCB T ss_pred CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCC T ss_conf 78889999999768998759818999853899625256776334577655576089987999962780215 No 41 >1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A Probab=80.19 E-value=2.2 Score=19.12 Aligned_cols=199 Identities=15% Similarity=0.154 Sum_probs=86.8 Q ss_pred ECCCCEEEE--CCCCCEEEEEEEECCCC---CEEEEEEECCCCE--EE-------EEEECCCCEEEEEEEECCCCCCCC- Q ss_conf 246856630--22672189999615777---5278998068613--67-------875136643799986157887775- Q gi|254780160|r 76 KIIGGKVSF--DLFPGDYLISASFGHVG---VVKKITVSSKEKN--QK-------QVFILNAGGIRLYSIYKPGSPIVD- 140 (298) Q Consensus 76 ~~~G~~~~~--~L~pG~Y~v~~s~g~~~---~~~~vtV~~~~~~--~~-------~~~~~~ag~~~~~~~~~~~~~~~~- 140 (298) +.+|.+... -..+|.|.|++.++... ..-.+.+...... .. .........+.+..++..+..... T Consensus 62 ~~dGty~v~ytp~~~G~y~i~V~~~g~~i~~sp~~v~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~D~~gn~~~~~ 141 (311) T 1wlh_A 62 NGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDG 141 (311) T ss_dssp CSSSEEEEEECCCSCSEEEEEEEESSSBCTTCSEEEEEECCBCTTTCCEESGGGTCEESSSCEEEEEECBBSSSSBCSSC T ss_pred CCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEEEECCCCEECCC T ss_conf 99967999982266740788999899350368731235788874057761566413761883689999760457362149 Q ss_pred -CEEEEEEECCCCCEEE-EEEEC-CCCCEE--EEECCCCEEEEEEECCCCCEEEE--EEEECCCCEEE-EEEEECCCEEE Q ss_conf -5189999838974356-67505-675135--21067617999961577854454--48842886378-99993452389 Q gi|254780160|r 141 -DELTFSIYSNPNHKAL-LITDK-VRSGTL--VRLGTNNYQITSHYGKYNAIVST--VVKVEPGKIID-VTIQNRAAKIT 212 (298) Q Consensus 141 -~~~~f~i~~~~~~~~~-~~t~~-~~~~~~--~~L~~G~Y~v~et~a~~~~~~~~--~i~V~~g~~~~-~tv~~~~~~~~ 212 (298) ..+...+....+.... .+.+. +|.+.+ .-..+|.|.|..++.... +... .++|..+.... ..+ ...... T Consensus 142 ~~~~~v~v~~p~g~~~~~~v~d~~dGty~v~~~p~~~G~y~v~V~~~g~~-v~gSPf~v~V~~~~~~~~~~~--~~~~~~ 218 (311) T 1wlh_A 142 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNP-IKNMPIDVKCIEGANGEDSSF--GSFTFT 218 (311) T ss_dssp CCCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETTEE-CTTCSCEEEEECCCCGGGCEE--EEEEEE T ss_pred CCEEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEECCEE-CCCCCEEEEEECCCCCCCCCC--CCCEEE T ss_conf 97179999968999987799999999799999646571189999989998-899998999964887554200--352003 Q ss_pred EEEEECCCCCC----CCCEEEEEECCCCCE----EEECCCCEEEC--CCCCEEEEEEEECCCCEE-EEEEEEEECCC Q ss_conf 99983478863----276089998389979----74212521212--448702899995388246-77799972885 Q gi|254780160|r 213 FKLVSEMGGEA----VADTAWSILTASGDT----VGESANASPSM--VLSEGDYTVIARNKERNY-SREFSVLTGKS 278 (298) Q Consensus 213 ~~~v~~~~G~~----l~ga~~~i~~~~g~~----vt~~~G~~~~~--~L~~G~Y~v~a~~~~~~y-~~~ftV~~g~~ 278 (298) ....+.. +.. -....+.+..+++.+ +...+|.|... --.+|+|.+.++.++..- -.+|+|..+.. T Consensus 219 v~~~~~~-~~~~~~g~~~l~v~v~~p~~~~~~~~~d~~dG~y~v~ytp~~~G~y~v~V~~~g~~V~gSPF~v~v~~~ 294 (311) T 1wlh_A 219 VAAKNKK-GEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGNP 294 (311) T ss_dssp EECBCTT-SSBCSSCCSCEEEEEESCCSEEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTEECTTCSEEEEESCT T ss_pred EECCCCE-EEECCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECCCCCEEEEECCC T ss_conf 6535622-542237898179999689987313899899998999998889988999999999999997979897899 No 42 >3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A* Probab=80.05 E-value=2.2 Score=19.09 Aligned_cols=58 Identities=10% Similarity=0.067 Sum_probs=36.7 Q ss_pred CCEEEEEEEECCCCCCCCCCEEEEEEECCCC------------CCCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 2327999998688775346759999953888------------762058898246856630226721899 Q gi|254780160|r 36 AQRITCEARLTENSTSIDSGVSWHIFDSISN------------KKNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 36 ~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~------------~~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) +.-+.|+.++.+..+.++.|+...|+..+.. -.++=...|+++|.+.+.-+.||.|-+ T Consensus 129 G~pl~l~G~V~D~~g~Pi~gA~vdiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~f~Ti~P~~Y~i 198 (280) T 3hhy_A 129 ITPLVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQI 198 (280) T ss_dssp SCEEEEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC T ss_conf 5579999999889999978848999844899974566888877663789975899549999973677788 No 43 >3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida} Probab=79.57 E-value=2.3 Score=18.99 Aligned_cols=59 Identities=14% Similarity=0.030 Sum_probs=40.5 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC------------CCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 023279999986887753467599999538887------------62058898246856630226721899 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK------------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~------------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) ++.-+.|+.++.+..+.++.|+...|+..+... .++-...|+++|.+.+.-+.||-|.+ T Consensus 126 ~G~pl~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~Td~~G~y~f~Ti~P~~Y~i 196 (290) T 3n9t_A 126 DGVPALVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI 196 (290) T ss_dssp CSCEEEEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCC T ss_conf 98579999999889999957827899954899877887888888886668861899709999994144456 No 44 >2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxidoreductase; HET: PCF; 2.65A {Pseudomonas putida} Probab=79.28 E-value=2.3 Score=18.93 Aligned_cols=58 Identities=7% Similarity=0.074 Sum_probs=39.9 Q ss_pred CCEEEEEEEECCCCCCCCCCEEEEEEECCCCC------------CCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 23279999986887753467599999538887------------62058898246856630226721899 Q gi|254780160|r 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNK------------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 36 ~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~------------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) +..+.++.++.+..+.++.|+...|+..+... .++=...|+++|.+.+.-+.||.|.+ T Consensus 130 G~~l~v~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~Ti~P~~Y~i 199 (311) T 2azq_A 130 GVVMFLQGQVFDANGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGC 199 (311) T ss_dssp CCEEEEEEEEECSSSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEEC T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCC T ss_conf 8779999999989998977857889955899976777788889888442723899828999998505468 No 45 >2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens} Probab=78.75 E-value=2.4 Score=18.83 Aligned_cols=47 Identities=19% Similarity=0.259 Sum_probs=26.6 Q ss_pred EEEEECCCCCEE------EECCC----CEEE-CCCCCEEEEEEEECC-CCEEEEEEEEE Q ss_conf 899983899797------42125----2121-244870289999538-82467779997 Q gi|254780160|r 228 AWSILTASGDTV------GESAN----ASPS-MVLSEGDYTVIARNK-ERNYSREFSVL 274 (298) Q Consensus 228 ~~~i~~~~g~~v------t~~~G----~~~~-~~L~~G~Y~v~a~~~-~~~y~~~ftV~ 274 (298) .+.|.+++|..+ ....| .|.+ ..++.|.|++.+... +...+..|.|+ T Consensus 39 ~v~i~~p~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~~~~~~~~F~Ve 97 (102) T 2p9r_A 39 LVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHPFTVE 97 (102) T ss_dssp EEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTTSCEEEEEEEEC T ss_pred EEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEE T ss_conf 69999999989995885617797799999999876717699999978997899999998 No 46 >1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 1f41_A 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ... Probab=77.34 E-value=2.7 Score=18.57 Aligned_cols=43 Identities=16% Similarity=0.223 Sum_probs=17.9 Q ss_pred CCCEEEEEEECCCCCCC--EEEEEEECCCCEEEE----CCCCCEEEEEE Q ss_conf 46759999953888762--058898246856630----22672189999 Q gi|254780160|r 53 DSGVSWHIFDSISNKKN--TLSTTKKIIGGKVSF----DLFPGDYLISA 95 (298) Q Consensus 53 ~~G~~~~vy~~~~~~~g--~~~~tt~~~G~~~~~----~L~pG~Y~v~~ 95 (298) -+|+..+||....+..- -....|+++|....+ .+.+|.|.|.- T Consensus 16 A~gv~V~L~~~~~~~~~~~i~~~~Td~dGRi~~~~~~~~~~~G~YeL~F 64 (115) T 1f86_A 16 AINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEI 64 (115) T ss_dssp CTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEE T ss_pred CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE T ss_conf 7899999999899998589999995899831687775657773199999 No 47 >2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A* Probab=77.23 E-value=2.6 Score=18.63 Aligned_cols=54 Identities=11% Similarity=0.017 Sum_probs=25.6 Q ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEE-----ECCCCCEEEEEE Q ss_conf 799999868877534675999995388876205889824685663-----022672189999 Q gi|254780160|r 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVS-----FDLFPGDYLISA 95 (298) Q Consensus 39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~-----~~L~pG~Y~v~~ 95 (298) |+-+...+..+.+ .+|+..+||..... .-....|+++|.... .++.+|.|.+.- T Consensus 11 iSTHVLDt~~G~P-A~gv~V~L~~~~~~--~~~~~~Td~dGR~~~~~~~~~~~~~G~Y~l~F 69 (121) T 2h0e_A 11 LTTHILDLTCGKP-AANVKIGLKRLGES--IMKEVYTNNDGRVDVPLLAGEELMSGEYVMEF 69 (121) T ss_dssp EECCEEETTTTEE-CTTCEEEEEETTSC--CCEEEECCTTSSCSSCSEEGGGCCSEEEEEEE T ss_pred CEEEEECCCCCCC-CCCCEEEEEECCCC--EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE T ss_conf 3365733888893-78998999987884--08899966998999676787665656899998 No 48 >2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsv_A* Probab=75.37 E-value=3 Score=18.23 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=35.9 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCC------------CCCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 02327999998688775346759999953888------------762058898246856630226721899 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISN------------KKNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~------------~~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) .++.+.++.++.+..+.++.|+...|+..+.. -.++=...|+++|.+.+.-+.||.|.+ T Consensus 133 ~G~~l~v~G~V~D~~G~Pi~gA~veiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~Ti~P~~Y~i 203 (312) T 2xsu_A 133 KVDTLIIEGTVTDTEGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGC 203 (312) T ss_dssp TSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC T ss_pred CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC T ss_conf 86569999999889999858807999826999753677878899887447961899859999967566577 No 49 >2v5m_A Dscam; neurobiology SPL, immunoglobulin domain, cell adhesion, membrane, developmental protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Probab=73.33 E-value=3.4 Score=17.91 Aligned_cols=53 Identities=19% Similarity=0.396 Sum_probs=30.8 Q ss_pred CCCCCCEEEEEECCCCCEEEECCCCEEECCCC---CEEEEEEEECCCCEEEEEEEEEEC Q ss_conf 86327608999838997974212521212448---702899995388246777999728 Q gi|254780160|r 221 GEAVADTAWSILTASGDTVGESANASPSMVLS---EGDYTVIARNKERNYSREFSVLTG 276 (298) Q Consensus 221 G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~---~G~Y~v~a~~~~~~y~~~ftV~~g 276 (298) |.|.+...|.. +|..+....+.+.+..+. .|.|+.+|+|..-..+..+.|+.| T Consensus 333 g~P~p~i~W~k---~g~~l~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~l~V~ 388 (388) T 2v5m_A 333 GNPIKTVSWMK---DGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLG 388 (388) T ss_dssp EECCCEEEEEE---TTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEC T ss_pred EECCCEEEEEE---CCEECCCCCCEEEECCCCHHHCEEEEEEEEECCCEEEEEEEEEEC T ss_conf 85699899999---999946999989999998670999999999689679999999989 No 50 >1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A Probab=70.61 E-value=3.9 Score=17.51 Aligned_cols=12 Identities=17% Similarity=0.318 Sum_probs=5.7 Q ss_pred EECCCCEEEEEE Q ss_conf 106761799996 Q gi|254780160|r 169 RLGTNNYQITSH 180 (298) Q Consensus 169 ~L~~G~Y~v~et 180 (298) .|.+|+|+|++. T Consensus 94 ~~~~GtYYi~V~ 105 (119) T 1nqj_A 94 KLRPGKYYLLVY 105 (119) T ss_dssp EECSEEEEEEEE T ss_pred ECCCCEEEEEEE T ss_conf 558988999999 No 51 >1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta fold, metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A* Probab=68.60 E-value=4.3 Score=17.24 Aligned_cols=58 Identities=9% Similarity=0.060 Sum_probs=37.3 Q ss_pred CCEEEEEEEECCCCCCCCCCEEEEEEECCCCC--------------CCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 23279999986887753467599999538887--------------62058898246856630226721899 Q gi|254780160|r 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNK--------------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 36 ~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~--------------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) ++.+.++.++.+..+.++.|+...|+..+... .++=...|+++|.+.+.-+.|+.|-+ T Consensus 131 G~~l~v~G~V~D~~G~Pv~gA~veiWqad~~G~Y~~~~~~~~~~~~~~rG~~~Td~~G~y~f~Ti~P~~Y~i 202 (311) T 1dmh_A 131 GHTLILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311) T ss_dssp CCEEEEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC T ss_conf 868999999998999998897788875499932567777777776675438931899849999978666677 No 52 >1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I Probab=68.56 E-value=4.3 Score=17.23 Aligned_cols=64 Identities=20% Similarity=0.197 Sum_probs=40.7 Q ss_pred CEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEE--ECCCCCEEEEEEEECCCCC Q ss_conf 32799999868877534675999995388876205889824685663--0226721899996157775 Q gi|254780160|r 37 QRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVS--FDLFPGDYLISASFGHVGV 102 (298) Q Consensus 37 ~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~--~~L~pG~Y~v~~s~g~~~~ 102 (298) ..++|++++.+++ .++.|.... |....+.......+++++|.+.. ....+|..+|.+....... T Consensus 19 d~~tlTvtv~d~g-npv~g~~V~-~ss~~g~~~~~~~~Td~~G~at~tlts~~~G~~tVTA~v~~~~~ 84 (282) T 1f00_I 19 DAITYTVKVMKGD-KPVSNQEVT-FTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSDVAV 84 (282) T ss_dssp CCEEEEEEEEETT-EECTTCEEE-EEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETTCCC T ss_pred EEEEEEEEEEECC-CCCCCCEEE-EEECCCCEECCEEEECCCCEEEEEEEECCEEEEEEEEEECCCCC T ss_conf 1799999997399-587998899-99789812032268779986999998032447999999867520 No 53 >1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A* Probab=64.27 E-value=5.1 Score=16.70 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=25.7 Q ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCCCE--EEEEEECCCCEEEE----CCCCCEEEEEE Q ss_conf 79999986887753467599999538887620--58898246856630----22672189999 Q gi|254780160|r 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNT--LSTTKKIIGGKVSF----DLFPGDYLISA 95 (298) Q Consensus 39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~--~~~tt~~~G~~~~~----~L~pG~Y~v~~ 95 (298) |+.+...+..|.+ -+|+..+||....+.... ....|+++|....+ ++++|.|.|.- T Consensus 4 IStHVLDt~~G~P-A~gv~V~L~~~~~~~~~~~i~~~~Td~dGRi~~l~~~~~~~~G~Y~L~F 65 (119) T 1oo2_A 4 LMVKILDAVKGTP-AGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEF 65 (119) T ss_dssp EEEEEEETTTTEE-CTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEE T ss_pred CEEEEECCCCCCC-CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE T ss_conf 3186804898885-7899899999889998289999987899868675674546780199999 No 54 >3gf8_A Putative polysaccharide binding proteins (DUF1812); NP_809975.1, structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482} Probab=63.22 E-value=5.4 Score=16.58 Aligned_cols=20 Identities=25% Similarity=0.285 Sum_probs=15.0 Q ss_pred EEECCCCCEEEEEEEECCCC Q ss_conf 63022672189999615777 Q gi|254780160|r 82 VSFDLFPGDYLISASFGHVG 101 (298) Q Consensus 82 ~~~~L~pG~Y~v~~s~g~~~ 101 (298) ...+||||+|.+.+=.|..+ T Consensus 68 m~l~l~~G~Y~~VaWgg~~~ 87 (296) T 3gf8_A 68 MEVELPVGQYQFMAWAGARD 87 (296) T ss_dssp EEECCCSEEEEEEEEESCCT T ss_pred EEECCCCCCEEEEEEECCCC T ss_conf 34047997489999988888 No 55 >3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus} Probab=62.96 E-value=5.4 Score=16.55 Aligned_cols=46 Identities=24% Similarity=0.289 Sum_probs=26.8 Q ss_pred CCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEE Q ss_conf 2267218999961577752789980686136787513664379998 Q gi|254780160|r 85 DLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYS 130 (298) Q Consensus 85 ~L~pG~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~~~ag~~~~~~ 130 (298) .+.||+|.||+.+|-.-+..=.++..++.......+.-+++-.+.. T Consensus 2 ~f~pGD~VVH~~hGIG~y~GL~~~~~~g~~~e~l~leYa~~dkL~V 47 (71) T 3mlq_E 2 PHMPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYKGEGKLYL 47 (71) T ss_dssp --------------CEEEEEEEEEEETTEEEEEEEEEETTTEEEEE T ss_pred CCCCCCEEEEECCCEEEEEEEEEECCCCCCCEEEEEEECCCCEEEE T ss_conf 7699989887078829981008860389142699999879998998 No 56 >2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus} Probab=61.47 E-value=5.8 Score=16.38 Aligned_cols=59 Identities=8% Similarity=0.061 Sum_probs=40.2 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC------------CCEEEEEEECCCCEEEECCCCCEEEE Q ss_conf 023279999986887753467599999538887------------62058898246856630226721899 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK------------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~------------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298) .++.+.++.++.+..+.++.||...|+..+... .++=...|+++|.+.+.-+.||.|.+ T Consensus 99 ~G~~l~v~G~V~D~~g~Pv~~A~veiWqad~~G~Y~~~~~~~~~~~~rG~~~TD~~G~y~f~Ti~P~~Y~i 169 (254) T 2boy_A 99 SGDTLIFRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254) T ss_dssp CSCEEEEEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEC T ss_conf 99789999999989998989957899633898037104777877577417865899859999982364322 No 57 >2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyneuropathy, transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A Probab=61.45 E-value=5.8 Score=16.37 Aligned_cols=56 Identities=13% Similarity=0.179 Sum_probs=24.5 Q ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCC--CEEEEEEECCCCEEEE----CCCCCEEEEEE Q ss_conf 799999868877534675999995388876--2058898246856630----22672189999 Q gi|254780160|r 39 ITCEARLTENSTSIDSGVSWHIFDSISNKK--NTLSTTKKIIGGKVSF----DLFPGDYLISA 95 (298) Q Consensus 39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~--g~~~~tt~~~G~~~~~----~L~pG~Y~v~~ 95 (298) |+.+...+..+.+ -+|+..+||....+.. --....|+++|....+ .+.+|.|.|.- T Consensus 12 IStHVLDt~~G~P-A~gv~V~L~~~~~~~~~~~i~~~~Td~dGRi~~~~~~~~~~~G~YeL~F 73 (127) T 2h4e_A 12 LMVKVLDAVRGSP-AINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEI 73 (127) T ss_dssp EEEEEEETTTTEE-CTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEE T ss_pred EEEEEECCCCCCC-CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE T ss_conf 0787821898876-8899999998789998689889984899846886586767765599999 No 58 >2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-sandwich, mixed alpha/beta structure; 1.8A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A* Probab=60.94 E-value=5.9 Score=16.32 Aligned_cols=58 Identities=17% Similarity=0.015 Sum_probs=37.0 Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCC-----------------CEE-EEEEECCCCEEEECCCCCEEE Q ss_conf 0232799999868877534675999995388876-----------------205-889824685663022672189 Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKK-----------------NTL-STTKKIIGGKVSFDLFPGDYL 92 (298) Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~-----------------g~~-~~tt~~~G~~~~~~L~pG~Y~ 92 (298) .++.+.|..++.+....++.|+...|+..+.... +.. ..+++++|...+.-+.||.|. T Consensus 49 ~G~~i~l~G~V~D~~g~Pv~~a~VeiWqad~~G~Y~~~~~~~~~~~~~~~~~~~~~~~td~~G~y~f~Ti~Pg~Y~ 124 (209) T 2bum_A 49 QGQRIRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVP 124 (209) T ss_dssp CSCEEEEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCB T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCC T ss_conf 8987999999988999898997899981699987456555656666877411688886589976999974661556 No 59 >2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown function; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A Probab=60.72 E-value=6 Score=16.29 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=22.5 Q ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCCCEE-EEEEECCCCEEE----ECCCCCEEEEEE Q ss_conf 799999868877534675999995388876205-889824685663----022672189999 Q gi|254780160|r 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTL-STTKKIIGGKVS----FDLFPGDYLISA 95 (298) Q Consensus 39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~-~~tt~~~G~~~~----~~L~pG~Y~v~~ 95 (298) |+.+...+..+.| -+|+..+||....+.--.+ ...|+++|.... ..+.+|.|.|.- T Consensus 6 iStHVLDt~~G~P-A~gv~V~L~~~~~~~~~~i~~~~Td~dGR~~~l~~~~~~~~G~YeL~F 66 (114) T 2g2n_A 6 LSVHILNQQTGKP-AADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVF 66 (114) T ss_dssp EEEEEEETTTTEE-CCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEE T ss_pred EEEEEECCCCCCC-CCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE T ss_conf 4587743899894-799989999967998499778888899988663476656552399999 No 60 >3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A* Probab=53.90 E-value=6.5 Score=16.03 Aligned_cols=12 Identities=8% Similarity=0.288 Sum_probs=8.2 Q ss_pred EECCCCEEEEEE Q ss_conf 106761799996 Q gi|254780160|r 169 RLGTNNYQITSH 180 (298) Q Consensus 169 ~L~~G~Y~v~et 180 (298) +|++|.|-|+.. T Consensus 126 ~l~~G~YLlR~E 137 (208) T 3eja_A 126 CIKSGYYLLRAE 137 (208) T ss_dssp SBCSEEEEEEEE T ss_pred CCCCCCEEEEEE T ss_conf 889975388763 No 61 >1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 Probab=51.14 E-value=8.5 Score=15.29 Aligned_cols=15 Identities=13% Similarity=0.310 Sum_probs=9.5 Q ss_pred CCCCEEEEEEEECCC Q ss_conf 267218999961577 Q gi|254780160|r 86 LFPGDYLISASFGHV 100 (298) Q Consensus 86 L~pG~Y~v~~s~g~~ 100 (298) -.+|.|.|.+.++.. T Consensus 77 ~~~G~y~i~V~~~G~ 91 (212) T 1qfh_A 77 PVEGNYNVNVTLRGN 91 (212) T ss_dssp CSSEEEEEEEEETTE T ss_pred CCCEEEEEEEEECCE T ss_conf 778869999999999 No 62 >2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens} Probab=49.80 E-value=8.9 Score=15.15 Aligned_cols=34 Identities=9% Similarity=0.058 Sum_probs=15.4 Q ss_pred CCCCCEEEEEEEECCCCEEEEEEEEEECCCCEEE Q ss_conf 2448702899995388246777999728850489 Q gi|254780160|r 249 MVLSEGDYTVIARNKERNYSREFSVLTGKSTIVE 282 (298) Q Consensus 249 ~~L~~G~Y~v~a~~~~~~y~~~ftV~~g~~~~ve 282 (298) ..|+||.|.|+..--...-+.+|.+..=.+.+++ T Consensus 110 ~~l~pG~Y~IIPsT~~pg~~g~F~LrV~S~~~~~ 143 (148) T 2qfe_A 110 ENIPSGIFNIIPSTFLPKQEGPFFLDFNSIIPIK 143 (148) T ss_dssp EEECSEEEEEEEEESSTTCCEEEEEEEEESSCCE T ss_pred EECCCCCEEEEEECCCCCCCCCEEEEEEECCCCE T ss_conf 8739956899987247997208899999799958 No 63 >3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 2h6u_A 2h1x_A Probab=48.82 E-value=9.2 Score=15.06 Aligned_cols=56 Identities=5% Similarity=0.015 Sum_probs=21.6 Q ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCCCE---EEEEEECCCCEEEE----CCCCCEEEEEE Q ss_conf 79999986887753467599999538887620---58898246856630----22672189999 Q gi|254780160|r 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNT---LSTTKKIIGGKVSF----DLFPGDYLISA 95 (298) Q Consensus 39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~---~~~tt~~~G~~~~~----~L~pG~Y~v~~ 95 (298) |+.+...+..+.| -+|+..+||...+..... ....|+++|....+ ++.+|.|.|.- T Consensus 28 LStHVLDt~~G~P-Aagv~V~L~~~~~~~~~~~~i~~~~Td~dGR~~~l~~~~~~~~G~YeL~F 90 (138) T 3iwv_A 28 LSTHVLNIAQGVP-GANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRF 90 (138) T ss_dssp EECCEEETTTTEE-CTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEE T ss_pred CEEEEECCCCCCC-CCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE T ss_conf 2477823898766-89998999997689996589889984899984876674557772099999 No 64 >3d33_A Domain of unknown function with AN immunoglobulin-like beta-sandwich fold; YP_001297618.1; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482} Probab=48.37 E-value=9.4 Score=15.01 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=30.4 Q ss_pred CCCCCEEEEEECC-CCCEEEE-----CCC---CEEECCCCCEEEEEEEECCC-CEEEEEEEEE Q ss_conf 6327608999838-9979742-----125---21212448702899995388-2467779997 Q gi|254780160|r 222 EAVADTAWSILTA-SGDTVGE-----SAN---ASPSMVLSEGDYTVIARNKE-RNYSREFSVL 274 (298) Q Consensus 222 ~~l~ga~~~i~~~-~g~~vt~-----~~G---~~~~~~L~~G~Y~v~a~~~~-~~y~~~ftV~ 274 (298) +++.+..++|.+. .|.+|.. ..+ .+.+.+++.|+|.+.-.++. .-..-.|+++ T Consensus 46 ~~~~~vtItI~~~~tG~vVY~~~~~~~~~~~i~I~L~~~~~G~Y~Lei~~~~g~~l~G~F~le 108 (108) T 3d33_A 46 SPDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTPSGHLTGYFTKE 108 (108) T ss_dssp SCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEESSCEEEEEEEEC T ss_pred CCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEC T ss_conf 789966999998988979999863278874899723576365289999858887999999979 No 65 >1zdv_A Outer membrane usher protein FIMD; beta sheet, alpha helix, membrane protein; NMR {Escherichia coli} SCOP: b.167.1.1 Probab=46.50 E-value=10 Score=14.83 Aligned_cols=14 Identities=29% Similarity=0.619 Sum_probs=7.7 Q ss_pred CCCCCEEEEEEEEC Q ss_conf 22672189999615 Q gi|254780160|r 85 DLFPGDYLISASFG 98 (298) Q Consensus 85 ~L~pG~Y~v~~s~g 98 (298) .|+||+|.|..--. T Consensus 3 ~i~PG~Y~vdI~vN 16 (115) T 1zdv_A 3 ELPPGTYRVDIYLN 16 (115) T ss_dssp CCCCSCEEEEEEET T ss_pred CCCCCEEEEEEEEC T ss_conf 67991718999999 No 66 >3o6u_A Uncharacterized protein CPE2226; structural genomics, protein structure initiative, NESG, CPR 2; 2.50A {Clostridium perfringens} Probab=42.27 E-value=12 Score=14.41 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=23.5 Q ss_pred ECCCCEEEEEEEC-CCCCEEEEEEEECCCCEEEEEEE Q ss_conf 0676179999615-77854454488428863789999 Q gi|254780160|r 170 LGTNNYQITSHYG-KYNAIVSTVVKVEPGKIIDVTIQ 205 (298) Q Consensus 170 L~~G~Y~v~et~a-~~~~~~~~~i~V~~g~~~~~tv~ 205 (298) |+-|+|+...... ..++.+...++|+.|+++.+.+. T Consensus 2 lkDGtY~~~~~~~~~~G~~~~v~vtVkdGKI~~v~~~ 38 (128) T 3o6u_A 2 LKDGDYTVETAKADDHGYKAKLSIKVSDGKITEAKYN 38 (128) T ss_dssp CCSEEEEEEESSCCTTSEEEEEEEEESSSSEEEEEEE T ss_pred CCCCEEEEEEECCCCCCCEEEEEEEEECCEEEEEEEE T ss_conf 7893599998745677976999999989969999997 No 67 >1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A Probab=41.42 E-value=12 Score=14.33 Aligned_cols=23 Identities=17% Similarity=0.231 Sum_probs=12.5 Q ss_pred ECCCCCEEEEEE---EECCCCEEEEE Q ss_conf 124487028999---95388246777 Q gi|254780160|r 248 SMVLSEGDYTVI---ARNKERNYSRE 270 (298) Q Consensus 248 ~~~L~~G~Y~v~---a~~~~~~y~~~ 270 (298) ...|++|+|++. ...|++..+-. T Consensus 73 ~~~l~~G~YtV~wr~vs~DGH~~~G~ 98 (104) T 1lyq_A 73 REPLPAGTYRVDWRAVSSDTHPITGN 98 (104) T ss_dssp SSCCCSEEEEEEEEECCTTSCCEEEE T ss_pred CCCCCCCEEEEEEEEEECCCCEECCE T ss_conf 87789824999999995589886257 No 68 >2j3s_A Filamin-A; acetylation, polymorphism, cytoskeleton, disease mutation, actin-binding, phosphorylation, immunoglobulin like, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A Probab=39.54 E-value=13 Score=14.14 Aligned_cols=186 Identities=17% Similarity=0.208 Sum_probs=79.2 Q ss_pred EEEEEECCCCEEEE--CCCCCEEEEEEEECCCCC---EEEEEEECCCCEEEEEEECC-------CCE---EEEEEEECCC Q ss_conf 58898246856630--226721899996157775---27899806861367875136-------643---7999861578 Q gi|254780160|r 71 LSTTKKIIGGKVSF--DLFPGDYLISASFGHVGV---VKKITVSSKEKNQKQVFILN-------AGG---IRLYSIYKPG 135 (298) Q Consensus 71 ~~~tt~~~G~~~~~--~L~pG~Y~v~~s~g~~~~---~~~vtV~~~~~~~~~~~~~~-------ag~---~~~~~~~~~~ 135 (298) ..++-..+|.+... --.+|.|.|++.++.... .-.+.+.............. ++. ..+..... T Consensus 51 ~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g~~i~gsPf~v~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~-- 128 (288) T 2j3s_A 51 INTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRRRRAPSVANVGSHCDLSLKIPEI-- 128 (288) T ss_dssp EEEEECTTSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEEEESCCSEEEEEEEEECCCCCCSCCSSCCC--------- T ss_pred EEEEECCCCEEEEEEEECCCEEEEEEEEECCEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCC-- T ss_conf 699989999899999938975799999999987048872999507876663046025577631027508999972778-- Q ss_pred CCCCCCEEEEEEECCCCCEE-EEEEEC-CCCCEE--EEECCCCEEEEEEECCCCCEEEEE--EEECC------------- Q ss_conf 87775518999983897435-667505-675135--210676179999615778544544--88428------------- Q gi|254780160|r 136 SPIVDDELTFSIYSNPNHKA-LLITDK-VRSGTL--VRLGTNNYQITSHYGKYNAIVSTV--VKVEP------------- 196 (298) Q Consensus 136 ~~~~~~~~~f~i~~~~~~~~-~~~t~~-~~~~~~--~~L~~G~Y~v~et~a~~~~~~~~~--i~V~~------------- 196 (298) ....+...+...++... ..+.+. ++.+.+ .-..+|.|.|..+++... +...+ ++|.. T Consensus 129 ---~~~~~~~~~~~p~g~~~~~~v~d~~dGty~v~~~p~~~G~y~v~V~~~g~~-i~~SP~~~~V~~~~~~~~~~~~~~G 204 (288) T 2j3s_A 129 ---SIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQH-VPGSPFQFTVGPLGEGGAHKVRAGG 204 (288) T ss_dssp ----CCCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEETTEE-CTTCSEEEEESCCCCCCGGGCEEES T ss_pred ---CCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCEE-CCCCCCCCCCCCCCCCCCEEEEEEC T ss_conf ---888607999769995884589989998899999965266689999999998-8899752113655456420368851 Q ss_pred --------CCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEE---ECCCCEEEC--CCCCEEEEEEEECC Q ss_conf --------86378999934523899998347886327608999838997974---212521212--44870289999538 Q gi|254780160|r 197 --------GKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG---ESANASPSM--VLSEGDYTVIARNK 263 (298) Q Consensus 197 --------g~~~~~tv~~~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt---~~~G~~~~~--~L~~G~Y~v~a~~~ 263 (298) |+..++++..+. .++.. -.+.+..+++..++ ..+|.|... -..+|+|.+.++.+ T Consensus 205 ~g~~~~~~g~~~~f~V~~~~----------aG~~~---l~v~v~gp~~~~v~~~d~~dG~y~v~y~p~~~G~y~v~V~~~ 271 (288) T 2j3s_A 205 PGLERAEAGVPAEFSIWTRE----------AGAGG---LAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFN 271 (288) T ss_dssp GGGTCEETTBCEEEEEECCB----------SSSEE---EEEEEEESSCEEEEEEECTTSEEEEEEEESSCEEEEEEEEET T ss_pred CCCCCCEECCCCEEEEEECC----------CCCCC---EEEEEECCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEEC T ss_conf 57554124165389999366----------89983---599997999975689989999899999878988899999999 Q ss_pred CCEE-EEEEEEEE Q ss_conf 8246-77799972 Q gi|254780160|r 264 ERNY-SREFSVLT 275 (298) Q Consensus 264 ~~~y-~~~ftV~~ 275 (298) +..- -.+|.|.. T Consensus 272 g~~i~gSPf~v~V 284 (288) T 2j3s_A 272 EEHIPDSPFVVPV 284 (288) T ss_dssp TEECTTCSEEEEE T ss_pred CEECCCCCEEEEE T ss_conf 9999998908796 No 69 >3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343} Probab=37.68 E-value=14 Score=13.96 Aligned_cols=74 Identities=18% Similarity=0.246 Sum_probs=45.8 Q ss_pred CEEEEEEEECCCCCCC----CCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEE--ECCC----CCEEEE Q ss_conf 3279999986887753----46759999953888762058898246856630226721899996--1577----752789 Q gi|254780160|r 37 QRITCEARLTENSTSI----DSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISAS--FGHV----GVVKKI 106 (298) Q Consensus 37 ~~i~l~a~~~~~~~~~----~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s--~g~~----~~~~~v 106 (298) +.-.|+.++.+.+.++ ..|+.+++|...-+...........+|.+ ...|-.|+|.+... .+|. ..+..+ T Consensus 9 P~s~~~G~i~~tgE~i~~~~~~gv~i~l~e~gy~~~~~~~~~~~~DGtf-~~~lF~G~Ykl~~~~~ngP~~~~~~dtI~v 87 (215) T 3hn5_A 9 PESMLTGRVMYNGEALQLRGNEAVQLQLYQHGYAKHDPINVYVNQDGMY-SANLFDGEYQMITKSGNGPWTSEGRDTINV 87 (215) T ss_dssp -CEEEEEEEEETTEECCCCCTTSCEEEEESSCGGGCCCEEEEBCTTSEE-EEEECSEEEEEEECTTCSSBCSTTCCCEEE T ss_pred CCCEEEEEEEECCCEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCE-EEEEECCEEEEEECCCCCCCCCCCCCEEEE T ss_conf 8745789998899771120688349999974557789768897589857-643766516899736887874577737999 Q ss_pred EEECC Q ss_conf 98068 Q gi|254780160|r 107 TVSSK 111 (298) Q Consensus 107 tV~~~ 111 (298) ++.+. T Consensus 88 ~i~G~ 92 (215) T 3hn5_A 88 TVAGN 92 (215) T ss_dssp EESSS T ss_pred EECCC T ss_conf 91884 No 70 >3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, cell adhesion; 2.50A {Bacteroides ovatus} Probab=35.44 E-value=15 Score=13.73 Aligned_cols=16 Identities=19% Similarity=0.088 Sum_probs=12.3 Q ss_pred CCCCCEEEEEEEECCC Q ss_conf 2267218999961577 Q gi|254780160|r 85 DLFPGDYLISASFGHV 100 (298) Q Consensus 85 ~L~pG~Y~v~~s~g~~ 100 (298) .||||+|.|.+-.|.. T Consensus 71 ~l~~G~Y~~VAWgg~~ 86 (314) T 3pay_A 71 ELDFGSYKVLTVGSLS 86 (314) T ss_dssp TCCSEEEEEEEEESCC T ss_pred CCCCCCEEEEEEECCC T ss_conf 7899858999996888 No 71 >2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1 Probab=31.99 E-value=17 Score=13.37 Aligned_cols=28 Identities=14% Similarity=0.044 Sum_probs=18.9 Q ss_pred ECCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 1244870289999538824677799972 Q gi|254780160|r 248 SMVLSEGDYTVIARNKERNYSREFSVLT 275 (298) Q Consensus 248 ~~~L~~G~Y~v~a~~~~~~y~~~ftV~~ 275 (298) ...|.+|||.|+..+.--.|..-.++.. T Consensus 477 ~~~L~~GDyVVH~dHGIGrY~GL~~i~v 504 (1151) T 2eyq_A 477 LAELHIGQPVVHLEHGVGRYAGMTTLEA 504 (1151) T ss_dssp CTTCCTTCEEEETTTEEEEEEEEEEEES T ss_pred HHHCCCCCHHHHCCCCEEEEECCEEECC T ss_conf 2206788711320676489713257403 No 72 >2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10 Probab=29.03 E-value=19 Score=13.05 Aligned_cols=24 Identities=21% Similarity=0.290 Sum_probs=10.0 Q ss_pred CEEEEEEEECCCCEE-EEEEEEEEC Q ss_conf 702899995388246-777999728 Q gi|254780160|r 253 EGDYTVIARNKERNY-SREFSVLTG 276 (298) Q Consensus 253 ~G~Y~v~a~~~~~~y-~~~ftV~~g 276 (298) +|.|.+..+.++... -.+|.|..+ T Consensus 66 ~G~h~v~V~~~g~~IpgSPf~v~V~ 90 (102) T 2dlg_A 66 MGVHTVSVKYRGQHVTGSPFQFTVG 90 (102) T ss_dssp TCEEEEEEESSSSBCSSCSEEEEBC T ss_pred CCEEEEEEEECCEECCCCCEEEEEE T ss_conf 6279999999999989989898984 No 73 >2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=26.88 E-value=21 Score=12.81 Aligned_cols=11 Identities=36% Similarity=0.299 Sum_probs=5.1 Q ss_pred ECCCCCEEEEE Q ss_conf 12448702899 Q gi|254780160|r 248 SMVLSEGDYTV 258 (298) Q Consensus 248 ~~~L~~G~Y~v 258 (298) +..|.+|.|+| T Consensus 74 ~s~~~~G~Y~f 84 (113) T 2e7m_A 74 LSQLSVGLYVF 84 (113) T ss_dssp ECSCCSEEEEE T ss_pred EEECCCCEEEE T ss_conf 74045756999 No 74 >2kzx_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Clostridium thermocellum} Probab=26.65 E-value=21 Score=12.78 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=22.2 Q ss_pred ECCCCEEEEEEEC-CCCCEEEEEEEECCCCEEEEEEEE Q ss_conf 0676179999615-778544544884288637899993 Q gi|254780160|r 170 LGTNNYQITSHYG-KYNAIVSTVVKVEPGKIIDVTIQN 206 (298) Q Consensus 170 L~~G~Y~v~et~a-~~~~~~~~~i~V~~g~~~~~tv~~ 206 (298) |.-|+|+...... ..++.....|+|..|+++.+.+.. T Consensus 1 lkDGtY~~~~~~~d~~g~~~~V~vtV~dgkIt~v~~~~ 38 (131) T 2kzx_A 1 MKDGTYYAEADDFDESGWKDTVTIEVKNGKIVSVDWNA 38 (131) T ss_dssp CCSSEEEEECSSCCTTSEEEEEEEEEETTEEEEEEEEE T ss_pred CCCCEEEEEEEECCCCCCEEEEEEEEECCEEEEEEEEE T ss_conf 99838999998237888569999999899999999998 No 75 >3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} PDB: 3jqx_A Probab=22.86 E-value=24 Score=12.33 Aligned_cols=12 Identities=17% Similarity=0.019 Sum_probs=5.5 Q ss_pred EECCCCEEEEEE Q ss_conf 106761799996 Q gi|254780160|r 169 RLGTNNYQITSH 180 (298) Q Consensus 169 ~L~~G~Y~v~et 180 (298) .|++|+|+|++. T Consensus 91 ~~~~G~Yyl~V~ 102 (121) T 3jqw_A 91 ADKPGRYYIHLY 102 (121) T ss_dssp ECSCEEEEEEEE T ss_pred CCCCEEEEEEEE T ss_conf 068804999999 No 76 >2inu_A Inulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A* Probab=22.70 E-value=25 Score=12.31 Aligned_cols=10 Identities=40% Similarity=0.723 Sum_probs=4.6 Q ss_pred ECCCCCEEEE Q ss_conf 0226721899 Q gi|254780160|r 84 FDLFPGDYLI 93 (298) Q Consensus 84 ~~L~pG~Y~v 93 (298) .-||||+|.+ T Consensus 60 V~ip~GtY~i 69 (410) T 2inu_A 60 IIIPPGDYDL 69 (410) T ss_dssp EECCSEEEEE T ss_pred EEECCCEEEE T ss_conf 9999975895 No 77 >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Probab=21.75 E-value=26 Score=12.19 Aligned_cols=18 Identities=17% Similarity=0.209 Sum_probs=9.5 Q ss_pred CCEEEEECCCC-EEEEEEE Q ss_conf 51352106761-7999961 Q gi|254780160|r 164 SGTLVRLGTNN-YQITSHY 181 (298) Q Consensus 164 ~~~~~~L~~G~-Y~v~et~ 181 (298) ...+.+|.||+ |.|.+.. T Consensus 159 ~~~v~~L~pgt~Y~~~V~A 177 (197) T 3lpw_A 159 EATITGLIQGEEYSFRVSA 177 (197) T ss_dssp EEEECCCCTTCEEEEEEEE T ss_pred EEEECCCCCCCEEEEEEEE T ss_conf 7998998899989999999 No 78 >2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A Probab=21.65 E-value=26 Score=12.17 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=12.1 Q ss_pred CCEEEEEEEECCCCEE-EEEEEEEECCC Q ss_conf 8702899995388246-77799972885 Q gi|254780160|r 252 SEGDYTVIARNKERNY-SREFSVLTGKS 278 (298) Q Consensus 252 ~~G~Y~v~a~~~~~~y-~~~ftV~~g~~ 278 (298) .+|.|.+..+.++... -.+|.|..... T Consensus 75 ~~G~h~i~V~~~g~~I~gSPf~v~V~~~ 102 (112) T 2d7p_A 75 ENGVHSIDVKFNGAHIPGSPFKIRVGEQ 102 (112) T ss_dssp SCEEEEEEEEESSCBCTTCSEEEEECCC T ss_pred CCCCEEEEEEECCEECCCCCEEEEEECC T ss_conf 6732899999999999998989898065 No 79 >3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal domain; usher, N-terminal domain, ternary complex with chaperone and pilus subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli K12} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A Probab=21.05 E-value=27 Score=12.09 Aligned_cols=12 Identities=33% Similarity=0.656 Sum_probs=5.8 Q ss_pred CCCCCEEEEEEE Q ss_conf 226721899996 Q gi|254780160|r 85 DLFPGDYLISAS 96 (298) Q Consensus 85 ~L~pG~Y~v~~s 96 (298) .++||.|.|..- T Consensus 27 ~~~PG~Y~vdiy 38 (125) T 3bwu_D 27 ELPPGTYRVDIY 38 (125) T ss_dssp SSCSEEEEEEEE T ss_pred CCCCEEEEEEEE T ss_conf 869848799999 No 80 >2bcm_B F1845 fimbrial protein; DAAE adhesin, donor strand complementation, cell adhesion; 1.48A {Escherichia coli} Probab=20.40 E-value=27 Score=12.01 Aligned_cols=13 Identities=15% Similarity=0.220 Sum_probs=8.4 Q ss_pred EEECCCCEEEEEE Q ss_conf 2106761799996 Q gi|254780160|r 168 VRLGTNNYQITSH 180 (298) Q Consensus 168 ~~L~~G~Y~v~et 180 (298) ...|+|.|++.-. T Consensus 121 t~~ptG~YTLnL~ 133 (165) T 2bcm_B 121 TDKPTGEYTLNLT 133 (165) T ss_dssp TTSCSEEEEEEEE T ss_pred CCCCCCCEEEEEC T ss_conf 4688852799942 Done!