HHsearch alignment of GI: 254780161 and MMDB domain: 1ps1_A_

>1ps1_A (A:) Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP}
Probab=93.94  E-value=0.43  Score=26.04  Aligned_cols=173  Identities=12%  Similarity=0.037  Sum_probs=104.9

Q ss_pred             HHHHHCC---HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC--
Q ss_conf             9988599---88806899999999999776036788258999999999999977401789868989999999998618--
Q gi|254780161|r   37 LACLLSP---PLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD--  111 (299)
Q Consensus        37 ~a~~~lP---~~~R~~~~alyaf~re~d~i~d~~~~~~~~~~rL~~w~~~l~~~~~~~~~~~~~Pv~~aL~~~~~~~~--  111 (299)
                      +++.+.|   ++.-..+..+.++.-..||+.|+..........  --...+.....+...++.+|+..++.+...+..  
T Consensus        53 ~~~~~~P~~~~e~l~~~a~~~~~~~~~DD~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (337)
T 1ps1_A           53 LASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRGENPEDTK--QLTDQVAAALDGPLPDTAPPIAHGFADIWRRTCEG  130 (337)
T ss_dssp             HHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGGGCHHHHH--HHHHHHHGGGTSCCCTTSCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH--HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             9999778999999999999999999845242575536999999--99999998734888764559999999999999841


Q ss_pred             CCHHHHHH-------HHHHHHHHCCC----CCCCCHHHHHHHHHHHHHHHHHHH-HHH-CCCC------CHHHHHHHHHH
Q ss_conf             99899999-------99999853058----888998999998644337999999-984-0343------03455766889
Q gi|254780161|r  112 LPNQYFLD-------MIEAHFFDSYN----DSIFDCKQFEHYAFRISSRLIHLA-TMI-LDSE------RYSASLRVIKY  172 (299)
Q Consensus       112 l~~~~l~~-------lid~~~~Dl~~----~~~~t~~~L~~Y~~~~ag~vg~l~-~~i-~~~~------~~~~~~~~a~~  172 (299)
                      .+......       ++++.......    ..++|+++...+=..+.|+-..+. +.. .+..      ...........
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ps~~eY~~~R~~~~g~~~~~~l~~~~~g~~l~~~~~~~~~~~~l~~~  210 (337)
T 1ps1_A          131 MTPAWCARSARHWRNYFDGYVDEAESRFWNAPCDSAAQYLAMRRHTIGVQPTVDLAERAGRFEVPHRVFDSAVMSAMLQI  210 (337)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHTCHHHHHHHHHHHHTCCCCHHHHTSHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf             59999999999999999999999997534788999999999988702577899999998589889999961145899999


Q ss_pred             HHHHHHHHHHHHCCHHHHHCCCCC-CCHHHHHHCCCCHHH
Q ss_conf             999998998872247876348873-467899963999778
Q gi|254780161|r  173 AGIAQFIGQLICQLPIHYHRGQLY-FPLDILGAVGLDRES  211 (299)
Q Consensus       173 lG~A~ql~niLRdi~~d~~~gr~y-LP~~~l~~~gv~~e~  211 (299)
                      .+....++|=+-....+...|... +-.-++..+|++.++
T Consensus       211 ~~~~~~l~NDl~S~~KE~~~g~~~N~v~vl~~~~g~s~~~  250 (337)
T 1ps1_A          211 AVDVNLLLNDIASLEKEEARGEQNNMVMILRREHGWSKSR  250 (337)
T ss_dssp             HHHHHHHHHHHHTHHHHHHTTCCCSHHHHHHHHHCCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHH
T ss_conf             9999999889888999996387511789998638989999