HHsearch alignment of GI: 254780161 and MMDB domain: 1v4e_A_125-299
>1v4e_A (A:125-299) Octoprenyl-diphosphate synthase; trans-type prenyltransferase, thermophilic; 2.28A {Thermotoga maritima}
Probab=97.55 E-value=0.0017 Score=42.24 Aligned_cols=136 Identities=14% Similarity=0.054 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH---
Q ss_conf 999999999985305888-899899999864433799999998---4034303455766889999998998872247---
Q gi|254780161|r 115 QYFLDMIEAHFFDSYNDS-IFDCKQFEHYAFRISSRLIHLATM---ILDSERYSASLRVIKYAGIAQFIGQLICQLP--- 187 (299)
Q Consensus 115 ~~l~~lid~~~~Dl~~~~-~~t~~~L~~Y~~~~ag~vg~l~~~---i~~~~~~~~~~~~a~~lG~A~ql~niLRdi~--- 187 (299)
+.+..++.|...|+.... ..|++++..-+..-.|++..+++. ++++...+.......++|.++|+.|-+.|+-
T Consensus 10 ~~~~~~~~GQ~lDl~~~~~~~~~~~y~~i~~~KTg~lf~~a~~~ga~lag~~~e~~~~~~~~~G~~fQi~dD~~D~~~~~ 89 (175)
T 1v4e_A 10 NVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIMDFAGME 89 (175)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 01110246776677622799999999999874220232033334531123409999999999999999977622567844
Q ss_pred -------HHHHCCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHH------HHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf -------876348873467899963999778524689987999------999999999999999996445289999
Q gi|254780161|r 188 -------IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL------AIKIFAELGLKYLFKAREEMRYILPDV 250 (299)
Q Consensus 188 -------~d~~~gr~yLP~~~l~~~gv~~e~l~~~~~~~~~~~------~~~~~~~~A~~~l~~a~~~~~~lp~~~ 250 (299)
.|+..|+..+|.-..-++.-....-.....-..+.. ++......+..+.++|...+..+|...
T Consensus 90 ~~~~k~~~Dl~~gk~Tlp~~~al~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~a~~~l~~lp~~~ 165 (175)
T 1v4e_A 90 KIGKDGFLDLKNGVASFPLVTAMEKFPEARQMFENRDWSGLMSFMREKGILKECEETLKVLVKNVIIENSWLRDFV 165 (175)
T ss_dssp SCCTTSSCCCTTTTCCHHHHHHHHHCHHHHHHHHTTCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCGGGCCC-
T ss_pred HCCCCCHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2089414334179647999999986979999987789999999999838799999999999999887364788878