HHsearch alignment of GI: 254780161 and MMDB domain: 2zco_A_106-239
>2zco_A (A:106-239) Dehydrosqualene synthase; CRTM, carotenoid biosynthesis, staphyloxanthin biosynthesis, transferase, head-TO-head condensation; 1.58A {Staphylococcus aureus} PDB: 2zcp_A* 2zcq_A* 2zcr_A* 2zcs_A* 2zy1_A*
Probab=99.97 E-value=8.3e-29 Score=213.82 Aligned_cols=134 Identities=12% Similarity=0.174 Sum_probs=129.6
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf 98999999999985305888899899999864433799999998403430345576688999999899887224787634
Q gi|254780161|r 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192 (299)
Q Consensus 113 ~~~~l~~lid~~~~Dl~~~~~~t~~~L~~Y~~~~ag~vg~l~~~i~~~~~~~~~~~~a~~lG~A~ql~niLRdi~~d~~~ 192 (299)
|+++|.+||+||++|+++.+|+|++||+.||++|+|+||+|++.+++..+.....+++.++|.|+|+||+|||+++|+++
T Consensus 1 P~~~~~~li~~~~~Dl~~~~~~t~~dl~~Y~~~~ag~vg~l~~~~l~~~~~~~~~~~A~~lG~a~ql~niLRdi~~d~~~ 80 (134)
T 2zco_A 1 AFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFEN 80 (134)
T ss_dssp CHHHHHHHHHHHHHGGGCCCCSSHHHHHHHHHHHTHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 33478899899997751233576899999999863399999888850556301789999987798999999989987504
Q ss_pred CCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 887346789996399977852468998799999999999999999999644528
Q gi|254780161|r 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246 (299)
Q Consensus 193 gr~yLP~~~l~~~gv~~e~l~~~~~~~~~~~~~~~~~~~A~~~l~~a~~~~~~l 246 (299)
||+|||.|+|.+||++.+++.++..++++++++..++++|+.||.+|++.++.+
T Consensus 81 gr~ylP~d~l~~~g~~~~~l~~~~~~~~~~~~~~~~~~~A~~~l~~a~~~~~~L 134 (134)
T 2zco_A 81 ERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVF 134 (134)
T ss_dssp TCCCSCHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTGGGS
T ss_pred CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 760378799988599999998754335678776689999999898899778758