HHsearch results for GI: 254780161 and protein with PDBid: 1uby_A

>1uby_A FPS, farnesyl diphosphate synthase; transferase, isoprene biosynthesis, cholesterol biosynthesis; HET: DMA; 2.40A {Gallus gallus} SCOP: a.128.1.1 PDB: 1ubw_A* 1ubv_A* 1ubx_A* 1fps_A
Probab=90.20  E-value=0.83  Score=23.05  Aligned_cols=91  Identities=5%  Similarity=-0.076  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHCCCCC-------CCCHHHHHHHHHHHHHHH--H---HHHHHHCCCCC---HHHHHHHHHHHHHHHHHH
Q ss_conf             99999999985305888-------899899999864433799--9---99998403430---345576688999999899
Q gi|254780161|r  116 YFLDMIEAHFFDSYNDS-------IFDCKQFEHYAFRISSRL--I---HLATMILDSER---YSASLRVIKYAGIAQFIG  180 (299)
Q Consensus       116 ~l~~lid~~~~Dl~~~~-------~~t~~~L~~Y~~~~ag~v--g---~l~~~i~~~~~---~~~~~~~a~~lG~A~ql~  180 (299)
                      ....+..|...|+...+       ..+++++..-+..-.+..  .   .+.+.+.+..+   .........++|.|+|+.
T Consensus       177 ~~~~~~~GQ~lDl~~~~~~~~~~~~~t~~~y~~ii~~KTa~ls~~~~~~~~~~~~g~~~~~~~~~l~~~g~~lG~aFQI~  256 (367)
T 1uby_A          177 TAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQ  256 (367)
T ss_dssp             HHHHHHHHHHHHHHHSCTTSCCCTTCCHHHHHHHHHHHTHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88888999999997312444454327899999999998888888999998733222220377877765530005767731


Q ss_pred             HHHHCC----------HHHHHCCCCCCCHHHHHHCC
Q ss_conf             887224----------78763488734678999639
Q gi|254780161|r  181 QLICQL----------PIHYHRGQLYFPLDILGAVG  206 (299)
Q Consensus       181 niLRdi----------~~d~~~gr~yLP~~~l~~~g  206 (299)
                      +=+-|+          +.|+..|++-+|.-..-+.+
T Consensus       257 DD~lD~~gd~~~~gk~g~Di~egK~Tlpvi~al~~~  292 (367)
T 1uby_A          257 DDYLDCFGDPALTGAVGTDIQDNKCSWLVVQCLQRV  292 (367)
T ss_dssp             HHHHHHHCCTTCSSCCCCCSSSCCCCHHHHHHHHHC
T ss_pred             HHHHHHCCCHHHHCCCCCHHHCCCHHHHHHHHHHHC
T ss_conf             467660289666198553765795259999999849