HHsearch results for GI: 254780161 and protein with PDBid: 1v4e_A
>1v4e_A Octoprenyl-diphosphate synthase; trans-type prenyltransferase, thermophilic; 2.28A {Thermotoga maritima} SCOP: a.128.1.1 PDB: 1v4j_A 1wkz_A 1vg2_A 1wl3_A 1wl0_A 1wl2_A 1v4h_A 1v4i_A 1v4k_A 2azl_A 1wl1_A 1vg4_A 1vg3_A 1vg6_A 1vg7_A
Probab=92.44 E-value=0.5 Score=24.54 Aligned_cols=86 Identities=17% Similarity=0.131 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH-----
Q ss_conf 99999999853058-88899899999864433799999998---4034303455766889999998998872247-----
Q gi|254780161|r 117 FLDMIEAHFFDSYN-DSIFDCKQFEHYAFRISSRLIHLATM---ILDSERYSASLRVIKYAGIAQFIGQLICQLP----- 187 (299)
Q Consensus 117 l~~lid~~~~Dl~~-~~~~t~~~L~~Y~~~~ag~vg~l~~~---i~~~~~~~~~~~~a~~lG~A~ql~niLRdi~----- 187 (299)
...+..|...|+.. ....|.+++..-+..-.|++..+++. ++++...+.......++|.|+|+.+=+.|+-
T Consensus 136 ~~~~~~Gq~~d~~~~~~~~t~~~y~~ii~~KTa~lf~~~~~~gai~ag~~~~~l~~~g~~lG~afQi~DD~lD~~g~~~~ 215 (299)
T 1v4e_A 136 IGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIMDFAGMEKI 215 (299)
T ss_dssp HHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 43003578788872279999999999988621012631046777754761668999999999999976998973528864
Q ss_pred -----HHHHCCCCCCCHHHH
Q ss_conf -----876348873467899
Q gi|254780161|r 188 -----IHYHRGQLYFPLDIL 202 (299)
Q Consensus 188 -----~d~~~gr~yLP~~~l 202 (299)
.|+..|++-+|.-..
T Consensus 216 GK~~g~Dl~~gk~T~pii~a 235 (299)
T 1v4e_A 216 GKDGFLDLKNGVASFPLVTA 235 (299)
T ss_dssp CTTSSCCCTTTTCCHHHHHH
T ss_pred CCCCCHHHHCCCCHHHHHHH
T ss_conf 99510087679730999999