HHSEARCH alignment of GI: 254780161 and SCOP domain: d1v4ea_

Alignment
>d1v4ea_ a.128.1.1 (A:) Octoprenyl-diphosphate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=94.84  E-value=0.11  Score=27.33  Aligned_cols=85  Identities=18%  Similarity=0.137  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH-----
Q ss_conf             99999999853058-88899899999864433799999998---4034303455766889999998998872247-----
Q gi|254780161|r  117 FLDMIEAHFFDSYN-DSIFDCKQFEHYAFRISSRLIHLATM---ILDSERYSASLRVIKYAGIAQFIGQLICQLP-----  187 (299)
Q Consensus       117 l~~lid~~~~Dl~~-~~~~t~~~L~~Y~~~~ag~vg~l~~~---i~~~~~~~~~~~~a~~lG~A~ql~niLRdi~-----  187 (299)
                      ...+..|...|... ....|.+++..-+..-.|++..+++.   ++++...+.......++|.|+|+.+=+.|+-     
T Consensus       128 ~~~~~~Gq~~d~~~~~~~~t~~~y~~~i~~KT~~lf~~~~~~ga~l~g~~~~~l~~~g~~lG~afQi~DD~ld~~~~~~~  207 (280)
T d1v4ea_         128 IGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIMDFAGMEKI  207 (280)
T ss_dssp             HHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred             CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf             02204678777773169998999999887152438999999999971243899999999999999987762155460654


Q ss_pred             -----HHHHCCCCCCCHHH
Q ss_conf             -----87634887346789
Q gi|254780161|r  188 -----IHYHRGQLYFPLDI  201 (299)
Q Consensus       188 -----~d~~~gr~yLP~~~  201 (299)
                           .|+..|++-+|.-.
T Consensus       208 GK~~g~Dl~~gK~T~p~i~  226 (280)
T d1v4ea_         208 GKDGFLDLKNGVASFPLVT  226 (280)
T ss_dssp             CTTSSCCCTTTTCCHHHHH
T ss_pred             CCCCHHHHHCCCCCHHHHH
T ss_conf             1420456747971099999


SCOP domain information

class: All alpha proteins
fold: Terpenoid synthases
superfamily: Terpenoid synthases
family: Isoprenyl diphosphate synthases
domain: Octoprenyl-diphosphate synthase
species: Thermotoga maritima [TaxId: 2336]