HHsearch alignment for GI: 254780163 and conserved domain: CHL00026

Probab=95.60  E-value=0.11  Score=31.38  Aligned_cols=108  Identities=16%  Similarity=0.262  Sum_probs=65.5

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCC---------------------CC
Q ss_conf             688614320038899999873047733772068861246530110478000256444---------------------31
Q gi|254780163|r  509 CYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQG---------------------GI  567 (798)
Q Consensus       509 ~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~eg---------------------g~  567 (798)
T Consensus      1632 GILlIGsieTGRSYLVK~LAanSYvPlI~I~lnklL--------~nkp~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 1703 (2286)
T CHL00026       1632 GILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL--------DNKPKGFLIDDIDIDDSDDIDDSDDIDRDLDTELEL 1703 (2286)
T ss_pred             CEEEECCCCCCHHHHHHHHHHCCCCCEEEECHHHHH--------CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
T ss_conf             527978876666899998774263740896389984--------138643455543332233322210010000001120


Q ss_pred             -------------------CC---HHHHHCCCEEEEECCHHHCC---HHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEE
Q ss_conf             -------------------00---35551585177740445502---899999999877750217799776125429999
Q gi|254780163|r  568 -------------------LA---DSVDQNPYSVVLLDEIEKSH---PDVLNILLQIMDYGILTDQSGKKISFRNVILIM  622 (798)
Q Consensus       568 -------------------Lt---e~vr~~P~sVvl~DEiEKAh---~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~  622 (798)
T Consensus      1704 ~t~~~~~~~~~~~~i~~~~i~LqFELAk~MSPCIIWIpnIHeLnvnd~~~--l~LglL~n~ls~d~e--~~strNilVIA 1779 (2286)
T CHL00026       1704 LTMMNALTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNY--LSLGLLVNYLSRDCE--RCSTRNILVIA 1779 (2286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCCH--HHHHHHHHHHCCCCC--CCCCCCEEEEE
T ss_conf             00000344432333344445788999875498079617676605677621--469999998425643--34524518997


Q ss_pred             ECCCCH
Q ss_conf             424214
Q gi|254780163|r  623 TTNAGA  628 (798)
Q Consensus       623 TsN~G~  628 (798)
T Consensus      1780 STHiPq 1785 (2286)
T CHL00026       1780 STHIPQ 1785 (2286)
T ss_pred             CCCCCC
T ss_conf             067877