HHsearch alignment for GI: 254780163 and conserved domain: CHL00081
>CHL00081 chlI Mg-protoporyphyrin IX chelatase.
Probab=98.64 E-value=2.2e-06 Score=65.09 Aligned_cols=238 Identities=21% Similarity=0.267 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC-----CC-------CCH-----------------
Q ss_conf 2217899999999862267787489667641166899999999854-----89-------883-----------------
Q gi|254780163|r 206 LVGRHEEINRTIQILCRRSKNNPLYVGDPGVGKTAIAEGFAKQIVD-----GM-------VPD----------------- 256 (798)
Q Consensus 206 VIGRd~EI~riiqIL~RR~KNn~~lvG~~gvGktaive~la~~i~~-----~~-------vp~----------------- 256 (798)
T Consensus 14 IvGQe~~k~aLll~av~p~iGgVLi~G~~GtgKStlvRala~lLP~i~~v~~~~f~~~p~~p~~~~~~~~~~~~~~~~~~ 93 (347)
T CHL00081 14 IVGQEEMKLALLLNVIDPKIGGVMIMGDRGTGKSTTIRALVDLLPEIEVVKNDPFNSDPRDPDLMSDEVRERIRNGEKIP 93 (347)
T ss_pred HCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
T ss_conf 53849999999998257887869987899874999999999857874220688767898981002426665431466675
Q ss_pred -HHHEEEEEEEEHHHH---HCCCCCCCHHHHHHH--------HHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHH
Q ss_conf -452014455404675---306343123789999--------99987203898399973616630155444344777888
Q gi|254780163|r 257 -ILLGARIFSLDMGNL---IAGTRYRGDFEERIK--------KIVKEIESYANAILYIDEIHTLVGAGSASGISVDASNL 324 (798)
Q Consensus 257 -~l~~~~i~~ld~~~l---~ag~~~rg~fe~r~~--------~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~an~ 324 (798)
T Consensus 94 ~~~~~~p~v~lPlgaTEDrv~Gsl---Die~al~~G~~~f~pGlLa~A--~-rGiLyvDEINll---------~d~~v~~ 158 (347)
T CHL00081 94 TKKIKIPMVDLPLGATEDRVCGTI---DIEKALTEGVKAFEPGLLAKA--N-RGILYVDEVNLL---------DDHLVDI 158 (347)
T ss_pred CEECCCCEEECCCCCCCCEECCCH---HHHHHHHCCCCCCCCCHHHHC--C-CCEEEEEHHHHH---------HHHHHHH
T ss_conf 211468625368888523011400---099898458711565312220--3-885886145432---------3799999
Q ss_pred HHHHHCCCCE---------------EEEEECCHHHHHHHHHCCHHHHHHCE-EEEEC-CCCHHHHHHHHHHHHHHHHH--
Q ss_conf 8766302660---------------38873048999998520111432001-44306-87868999999861276654--
Q gi|254780163|r 325 LKPALSSGAV---------------RCIGSTTYSEYRQFFEKDKALVRRFQ-KIDVS-EPSIEDAIEIVKGIKPYFEE-- 385 (798)
Q Consensus 325 lkP~L~rg~~---------------~~IgatT~~ey~~~~e~d~al~rrF~-~i~v~-ep~~~~~~~iL~~~~~~ye~-- 385 (798)
T Consensus 159 LLda~a~G~~~VEReG~S~~~Pa~F~liaT~NPeEg----eLrp~llDRF~l~v~v~~~~~~e~R~eiv~~r-~~f~~~p 233 (347)
T CHL00081 159 LLDSAASGWNTVEREGISIRHPARFVLIGSGNPEEG----ELRPQLLDRFGMHAEIRTVKDPELRVKIVEQR-SNFDKNP 233 (347)
T ss_pred HHHHHHCCEEEECCCCEEECCCCCEEEEECCCCCCC----CCCHHHHHHEEEEEECCCCCCHHHHHHHHHHH-HHHHHCH
T ss_conf 999985580898046423305750068855786556----74888882632267458878989999999999-9765196
Q ss_pred --HC-CCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH---------------HHHHHHHHCCCCHHHHHHH
Q ss_conf --10-35121117899999865420155564679889986533332---------------1144322113657899986
Q gi|254780163|r 386 --HH-QLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDEAGASQI---------------LQPLSKRRKFITEKDIKKT 447 (798)
Q Consensus 386 --~h-~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDea~a~~~---------------~~~~~~~~~~~~~~~i~~~ 447 (798)
T Consensus 234 ~~f~~~~~~~~~~l~~~I~~Ar~~L~~V~v~~~~~~~i~~~~~~~~v~g~RA~I~l~raARA~AAL~GR~~V~~eDv~~a 313 (347)
T CHL00081 234 ENFREKYSESQDALKTQIILARQLLPNVEIDYDLRVKISQICSELDVDGLRGDIVTNRAAKALAAFNGRDEVTPGDIEKV 313 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 99999988789999999999986447735599999999999998489987189999999999999869983689999999
Q ss_pred HH----HCCCCCCHHHHHCC
Q ss_conf 63----10245310111001
Q gi|254780163|r 448 IA----SMNRSIHTTSFSRD 463 (798)
Q Consensus 448 ~~----~~~~gip~~~~~~~ 463 (798)
T Consensus 314 a~lVL~HRlrr~P~e~~~s~ 333 (347)
T CHL00081 314 ITLCLRHRLRKDPLESIDSG 333 (347)
T ss_pred HHHHHHHHCCCCCCCCCCCC
T ss_conf 99842010579962001652