HHsearch alignment for GI: 254780163 and conserved domain: CHL00176

Probab=99.32  E-value=5.6e-11  Score=98.03  Aligned_cols=162  Identities=30%  Similarity=0.426  Sum_probs=107.5

Q ss_pred             HHHHHCHHHHHHHHHHHHHHHHCCCCCCCC--------CCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCC
Q ss_conf             466534589999999998775204456578--------740688614320038899999873047733772068861246
Q gi|254780163|r  476 GTVVYGQEEAIKKLSSSIKIARAGLSDPNK--------PIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERH  547 (798)
Q Consensus       476 ~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~r--------P~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~  547 (798)
T Consensus       176 F~DVaG~~eaK~el~Eivdf----Lk~P~k~~~~Gak~PkG-vLL~GpPGTGKTlLAkAvAgEa~vpF~~~sgs~F~e~-  249 (631)
T CHL00176        176 FNDVAGVEEAKEELEEVVTF----LKKPERFTAVGAKIPKG-VLLVGPPGTGKTLLAKAIAGEAEVPFFSISGSEFVEM-  249 (631)
T ss_pred             CCCCCCCHHHHHHHHHHHHH----HCCHHHHHHCCCCCCCE-EEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHH-
T ss_conf             53228858999999999998----35958876449968965-8988989987889999985655884699883785564-


Q ss_pred             CCCHHCCCCCHHCCCCCC--CCCCHHHHHCCCEEEEECCHHH-----------CCH---HHHHHHHHHHHHHHCCCCCCC
Q ss_conf             530110478000256444--3100355515851777404455-----------028---999999998777502177997
Q gi|254780163|r  548 AVSRLIGAPPGYVGFGQG--GILADSVDQNPYSVVLLDEIEK-----------SHP---DVLNILLQIMDYGILTDQSGK  611 (798)
Q Consensus       548 ~vs~LiGappGYvG~~eg--g~Lte~vr~~P~sVvl~DEiEK-----------Ah~---~v~~~llqild~G~ltd~~Gr  611 (798)
T Consensus       250 -----------~vGvga~rVR~LF~~Ar~~aP~IiFIDEiDaig~~Rg~~~~gg~~e~e~tlnqLL~emD-Gf~-~~---  313 (631)
T CHL00176        250 -----------FVGVGAARVRDLFKKAKENSPCIVFIDEIDAVGRQRGAGVGGGNDEREQTLNQLLTEMD-GFE-GN---  313 (631)
T ss_pred             -----------HCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC-CCC-CC---
T ss_conf             -----------21555899999999998639969998710120114789888985089999999999842-888-78---


Q ss_pred             EECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             761254299994242145533036898821114889999987288788177682896288999999999999999
Q gi|254780163|r  612 KISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIM  686 (798)
Q Consensus       612 ~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~  686 (798)
T Consensus       314 ----~gViViaATNrpd-----------------~LDpAL---lRP---GRFDR~I~V~lPD~~gR~~IL~vh~k  361 (631)
T CHL00176        314 ----KGVIVIAATNRID-----------------ILDAAL---LRP---GRFDRQVTVSLPDFEGRLDILKVHAR  361 (631)
T ss_pred             ----CCEEEEEECCCCC-----------------CCCHHH---CCC---CCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf             ----8869998258855-----------------456866---268---87754998269898999999999970