HHsearch alignment for GI: 254780163 and conserved domain: CHL00195
>CHL00195 ycf46 Ycf46; Provisional.
Probab=99.60 E-value=1.9e-12 Score=108.61 Aligned_cols=210 Identities=22% Similarity=0.289 Sum_probs=136.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHH
Q ss_conf 74896676411668999999998548988345201445540467530634312378999999987203898399973616
Q gi|254780163|r 227 NPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESYANAILYIDEIH 306 (798)
Q Consensus 227 n~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~~~~ilfideih 306 (798)
T Consensus 261 GvLL~GpPG~GKtl~AKAvA~e----------~~~p~l~l~~~~l~~--~~vGesE~~~r~~f~~A~~~aP~ilfiDEid 328 (491)
T CHL00195 261 GLLLVGIQGTGKSLTAKAIANE----------WNLPLLRLDVGKLFG--GIVGESESRMRQMIQLAETISPCILWIDEID 328 (491)
T ss_pred EEEEECCCCCCHHHHHHHHHHH----------HCCCEEEEEHHHHHH--HHCCHHHHHHHHHHHHHHHHCCEEEEEEHHH
T ss_conf 7999799998789999999866----------389469966799756--0067049999999999986198589974654
Q ss_pred HHHCCCCCCCCC-CC--HHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHCCHHHHH--HCE-EEEECCCCHHHHHHHHHH
Q ss_conf 630155444344-77--7888876630-2-66038873048999998520111432--001-443068786899999986
Q gi|254780163|r 307 TLVGAGSASGIS-VD--ASNLLKPALS-S-GAVRCIGSTTYSEYRQFFEKDKALVR--RFQ-KIDVSEPSIEDAIEIVKG 378 (798)
Q Consensus 307 ~ligag~~~g~~-~d--~an~lkP~L~-r-g~~~~IgatT~~ey~~~~e~d~al~r--rF~-~i~v~ep~~~~~~~iL~~ 378 (798)
T Consensus 329 k~~~~~~~~~d~g~s~rv~~~~Lt~m~e~~~~VfViattN~-----~~~L~pellR~GRFD~~~~v~lP~~~~R~~I~~i 403 (491)
T CHL00195 329 KAFSGLDSKGDSGTSNRVLATFITWLSEKKSPVFVVATANN-----IDSLPLELLRKGRFDEIFFLDLPNLEERELIFKI 403 (491)
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCC-----CCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 54258888888723289999999986468997699995899-----7558987708987770476489598999999999
Q ss_pred HHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
Q ss_conf 12766541035121117899999865420155564679889986533332114432211365789998663102453101
Q gi|254780163|r 379 IKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTT 458 (798)
Q Consensus 379 ~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~ 458 (798)
T Consensus 404 hl~~~---~~~~~~~~d~~~la~~t~gfsG------AeI---e~~v~~A~~~A~~~~-r~~~~~dl~~a~~~---~~Pls 467 (491)
T CHL00195 404 HLKRF---RPNSWQNYDIEILSQLTNKFSG------AEI---EQSIIEAMHHAFSEK-REFTTEDICLALKQ---LIPLA 467 (491)
T ss_pred HHHCC---CCCCCCCCCHHHHHHHCCCCCH------HHH---HHHHHHHHHHHHHCC-CCCCHHHHHHHHHH---CCCHH
T ss_conf 98544---7887554699999976859888------999---999999999998758-86658999999981---78813
Q ss_pred HHHCCHHHHHH
Q ss_conf 11001123342
Q gi|254780163|r 459 SFSRDDDSVLS 469 (798)
Q Consensus 459 ~~~~~~~~~l~ 469 (798)
T Consensus 468 ~t~~e~i~~lr 478 (491)
T CHL00195 468 QTDKEQIEALQ 478 (491)
T ss_pred HCCHHHHHHHH
T ss_conf 32899999999