HHsearch alignment for GI: 254780163 and conserved domain: COG0465
>COG0465 HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones].
Probab=98.97 E-value=2.7e-08 Score=78.82 Aligned_cols=339 Identities=21% Similarity=0.259 Sum_probs=176.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHC------------CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHH
Q ss_conf 611222178999999998622------------67787489667641166899999999854898834520144554046
Q gi|254780163|r 202 KVDILVGRHEEINRTIQILCR------------RSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMG 269 (798)
Q Consensus 202 KLDPVIGRd~EI~riiqIL~R------------R~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~ 269 (798)
T Consensus 148 ~F~DVAG~dEakeel~EiVdfLk~p~ky~~lGakiPkGvlLvGpPGTGKTLLAkAvAg---EA~VP-------Ff~iSGS 217 (596)
T COG0465 148 TFADVAGVDEAKEELSELVDFLKNPKKYQALGAKIPKGVLLVGPPGTGKTLLAKAVAG---EAGVP-------FFSISGS 217 (596)
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHC---CCCCC-------CEECCCH
T ss_conf 7566418679999999999986385566752353456526855999872789999845---46898-------3530344
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCC-CCCCCCCCCH----HHHHHHHH----CCCCEEEEEEC
Q ss_conf 753063431237899999998720389839997361663015-5444344777----88887663----02660388730
Q gi|254780163|r 270 NLIAGTRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGA-GSASGISVDA----SNLLKPAL----SSGAVRCIGST 340 (798)
Q Consensus 270 ~l~ag~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~liga-g~~~g~~~d~----an~lkP~L----~rg~~~~Igat 340 (798)
T Consensus 218 ~FVe--mfVGvGAsRVRdLF~qAkk~aP~IIFIDEiDAvGr~Rg~g~GggnderEQTLNQlLvEmDGF~~~~gviviaaT 295 (596)
T COG0465 218 DFVE--MFVGVGASRVRDLFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFGGNEGVIVIAAT 295 (596)
T ss_pred HHHH--HHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 4644--31478838889999985515996698763433145457788998069999998888520157888754885267
Q ss_pred CHHHHHHHHHCCHHHHH--HC-EEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 48999998520111432--00-1443068786899999986127665410351211178999998654201555646798
Q gi|254780163|r 341 TYSEYRQFFEKDKALVR--RF-QKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAI 417 (798)
Q Consensus 341 T~~ey~~~~e~d~al~r--rF-~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAi 417 (798)
T Consensus 296 NRpd-----VlD~ALlRpgRFDRqI~V~~PDi~gRe~IlkvH-~~-----~~~l~~~V~l~~---iAr~tpGfsG-AdL~ 360 (596)
T COG0465 296 NRPD-----VLDPALLRPGRFDRQILVELPDIKGREQILKVH-AK-----NKPLAEDVDLKK---IARGTPGFSG-ADLA 360 (596)
T ss_pred CCCC-----CCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHH-HH-----CCCCCCCCCHHH---HHHHCCCCCC-CHHH
T ss_conf 8743-----331765288776625544785156578887886-41-----577776678889---8643778563-0676
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 89986533332114432211365789998663102453101110011233421000024665345899999999987752
Q gi|254780163|r 418 DVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQEEAIKKLSSSIKIAR 497 (798)
Q Consensus 418 dllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~~ai~~v~~~i~~~~ 497 (798)
T Consensus 361 nl~NEAa----l~aar~n~~~i~~~~i~ea~drv~~G~erks~vise~ek----------~~~AYhEaghalv~~~l--- 423 (596)
T COG0465 361 NLLNEAA----LLAARRNKKEITMRDIEEAIDRVIAGPERKSRVISEAEK----------KITAYHEAGHALVGLLL--- 423 (596)
T ss_pred HHHHHHH----HHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHC----------CCHHHHHHHHHHHHHHC---
T ss_conf 5566889----999883684675345388999996587768864674540----------32578899999999727---
Q ss_pred CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCE-EEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHHCC
Q ss_conf 04456578740688614320038899999873047733-77206886124653011047800025644431003555158
Q gi|254780163|r 498 AGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQL-LRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNP 576 (798)
Q Consensus 498 ~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~l-ir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~~P 576 (798)
T Consensus 424 ----~~~d~v-~KvtIiPrG-------~alG~t~~~Pe~d~~l~sk~~l~~~i~~~lg-----------GRaAEel~~g~ 480 (596)
T COG0465 424 ----PDADPV-HKVTIIPRG-------RALGYTLFLPEEDKYLMSKEELLDRIDVLLG-----------GRAAEELIFGY 480 (596)
T ss_pred ----CCCCCC-CEEEECCCC-------HHHCCEECCCCCCCCCCCHHHHHHHHHHHHC-----------CCHHHHHHHCC
T ss_conf ----887620-035522672-------2201100388545320127788879999866-----------71766646244
Q ss_pred CEEEEE--CCHHHCCHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 517774--044550289999999987775021779977
Q gi|254780163|r 577 YSVVLL--DEIEKSHPDVLNILLQIMDYGILTDQSGKK 612 (798)
Q Consensus 577 ~sVvl~--DEiEKAh~~v~~~llqild~G~ltd~~Gr~ 612 (798)
T Consensus 481 -e~ttGa~~D~----~~at~~ar~mVt~~Gms~~lG~v 513 (596)
T COG0465 481 -EITTGASNDL----EKATDLARAMVTEYGMSAKLGPV 513 (596)
T ss_pred -CCCCCCHHHH----HHHHHHHHHHHHHCCCCHHHCCE
T ss_conf -5013521318----99999999853351852653651