HHsearch alignment for GI: 254780163 and conserved domain: COG1223

>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=99.23  E-value=4.9e-10  Score=91.26  Aligned_cols=203  Identities=28%  Similarity=0.411  Sum_probs=131.9

Q ss_pred             HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCC-----CCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCC
Q ss_conf             2466534589999999998775204456578-----74068861432003889999987304773377206886124653
Q gi|254780163|r  475 LGTVVYGQEEAIKKLSSSIKIARAGLSDPNK-----PIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAV  549 (798)
Q Consensus       475 l~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~r-----P~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~v  549 (798)
T Consensus       119 t~ddViGqEeAK~kcrli~~y----LenPe~Fg~WAPk-nVLFyGppGTGKTm~Akalane~kvp~l~vkat--------  185 (368)
T COG1223         119 TLDDVIGQEEAKRKCRLIMEY----LENPERFGDWAPK-NVLFYGPPGTGKTMMAKALANEAKVPLLLVKAT--------  185 (368)
T ss_pred             CHHHHHCHHHHHHHHHHHHHH----HHCHHHHCCCCCC-EEEEECCCCCCHHHHHHHHHCCCCCCEEEECHH--------
T ss_conf             176641639888887999999----6496876345754-168778999648799998725457854871168--------


Q ss_pred             CHHCCCCCHHCCCCC--CCCCCHHHHHCCCEEEEECCHHHCC------------HHHHHHHHHHHHHHHCCCCCCCEECC
Q ss_conf             011047800025644--4310035551585177740445502------------89999999987775021779977612
Q gi|254780163|r  550 SRLIGAPPGYVGFGQ--GGILADSVDQNPYSVVLLDEIEKSH------------PDVLNILLQIMDYGILTDQSGKKISF  615 (798)
Q Consensus       550 s~LiGappGYvG~~e--gg~Lte~vr~~P~sVvl~DEiEKAh------------~~v~~~llqild~G~ltd~~Gr~vdf  615 (798)
T Consensus       186 -~liGe---hVGdgar~Ihely~rA~~~aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelD-gi-~eneG-----  254 (368)
T COG1223         186 -ELIGE---HVGDGARRIHELYERARKAAPCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELD-GI-KENEG-----  254 (368)
T ss_pred             -HHHHH---HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC-CC-CCCCC-----
T ss_conf             -88887---743598999999998875198499840024555304578864549999999998501-74-45775-----


Q ss_pred             CCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             54299994242145533036898821114889999987288788177682896288999999999999999999999866
Q gi|254780163|r  616 RNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEK  695 (798)
Q Consensus       616 ~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~  695 (798)
T Consensus       255 --VvtIaaTN-----------------~p~~LD~aiR--------sRFEeEIEF~LP~~eEr~~ile~y~k~~-------  300 (368)
T COG1223         255 --VVTIAATN-----------------RPELLDPAIR--------SRFEEEIEFKLPNDEERLEILEYYAKKF-------  300 (368)
T ss_pred             --EEEEEECC-----------------CHHHCCHHHH--------HHHHHEEEEECCCHHHHHHHHHHHHHHC-------
T ss_conf             --69995059-----------------8465078888--------6556506564888589999999989858-------


Q ss_pred             CCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             988999889999999718981015326799999862359999996296
Q gi|254780163|r  696 GISFHFSEEVINWLVSHGYDVKMGARPLERIIKEHVKVPLADEILFGK  743 (798)
Q Consensus       696 ~i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~i~~~la~~il~~~  743 (798)
T Consensus       301 Plpv~~~---~~~~~~~t--~g~SgRd---ikekvlK~aLh~Ai~ed~  340 (368)
T COG1223         301 PLPVDAD---LRYLAAKT--KGMSGRD---IKEKVLKTALHRAIAEDR  340 (368)
T ss_pred             CCCCCCC---HHHHHHHH--CCCCCHH---HHHHHHHHHHHHHHHHCH
T ss_conf             9765568---99999984--7877206---899999999999987134