HHsearch alignment for GI: 254780163 and conserved domain: KOG0728

Probab=98.52  E-value=8.3e-06  Score=60.88  Aligned_cols=141  Identities=27%  Similarity=0.525  Sum_probs=75.7

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCC----CHHHHHCCCEEE
Q ss_conf             8740688614320038899999873047733772068861246530110478000256444310----035551585177
Q gi|254780163|r  505 KPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGIL----ADSVDQNPYSVV  580 (798)
Q Consensus       505 rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~L----te~vr~~P~sVv  580 (798)
T Consensus       180 QPKGvlLy-gppgtGktLlaraVahht~c~firvsgselvqk------------~ig--egsrmvrelfvmarehapsii  244 (404)
T KOG0728         180 QPKGVLLY-GPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK------------YIG--EGSRMVRELFVMAREHAPSII  244 (404)
T ss_pred             CCCCEEEE-CCCCCCHHHHHHHHHHHCCEEEEEECHHHHHHH------------HHH--HHHHHHHHHHHHHHHCCCCEE
T ss_conf             87604884-699975629999987541407999644999999------------850--138999999999875088267


Q ss_pred             EECCHHH-----------CCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             7404455-----------02899999999877750217799776125429999424214553303689882111488999
Q gi|254780163|r  581 LLDEIEK-----------SHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKE  649 (798)
Q Consensus       581 l~DEiEK-----------Ah~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~  649 (798)
T Consensus       245 fmdeidsigs~r~e~~~ggdsevqrtmlellnq--l-d--g-featknikvimatnr----i-------------dild~  301 (404)
T KOG0728         245 FMDEIDSIGSSRVESGSGGDSEVQRTMLELLNQ--L-D--G-FEATKNIKVIMATNR----I-------------DILDP  301 (404)
T ss_pred             EEHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--C-C--C-CCCCCCEEEEEECCC----C-------------CCCCH
T ss_conf             500001212343457898638999999999974--0-2--4-000366269984164----2-------------22468


Q ss_pred             HHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf             9987288788177682896288999999999999999999
Q gi|254780163|r  650 ALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLE  689 (798)
Q Consensus       650 ~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~  689 (798)
T Consensus       302 ---allrp---gridrkiefp~p~e~ar~~ilkihsrkmn  335 (404)
T KOG0728         302 ---ALLRP---GRIDRKIEFPPPNEEARLDILKIHSRKMN  335 (404)
T ss_pred             ---HHCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             ---66387---75455564899877888789988555301