HHsearch alignment for GI: 254780163 and conserved domain: KOG0743
>KOG0743 consensus.
Probab=97.30 E-value=0.0068 Score=39.97 Aligned_cols=128 Identities=28% Similarity=0.364 Sum_probs=82.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 67787489667641166899999999854898834520144554046753063431237899999998720389839997
Q gi|254780163|r 223 RSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESYANAILYI 302 (798)
Q Consensus 223 R~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~~~~ilfi 302 (798)
T Consensus 233 awKRGYLLYGPPGTGKSS~IaAmAn~----------L~ydIydLeLt~v------~~n~d--Lr~LL~~t~--~kSIivI 292 (457)
T KOG0743 233 AWKRGYLLYGPPGTGKSSFIAAMANY----------LNYDIYDLELTEV------KLDSD--LRHLLLATP--NKSILLI 292 (457)
T ss_pred CCCCCCEEECCCCCCHHHHHHHHHHH----------CCCCEEEEEECCC------CCCHH--HHHHHHHCC--CCCEEEE
T ss_conf 50004120479999888999999720----------5873677440023------68389--999997289--9718999
Q ss_pred CCHHHHHC---CCCC--C-----CCCCCHHHH---HHHHH-CCCCEEEEEECCHHHHHHHHHC-CHHHHH--HCEE-EEE
Q ss_conf 36166301---5544--4-----344777888---87663-0266038873048999998520-111432--0014-430
Q gi|254780163|r 303 DEIHTLVG---AGSA--S-----GISVDASNL---LKPAL-SSGAVRCIGSTTYSEYRQFFEK-DKALVR--RFQK-IDV 364 (798)
Q Consensus 303 deih~lig---ag~~--~-----g~~~d~an~---lkP~L-~rg~~~~IgatT~~ey~~~~e~-d~al~r--rF~~-i~v 364 (798)
T Consensus 293 EDIDcs~~l~~~~~~~~~~~~~~~~~VTlSGLLNfiDGlwSscg~ERIivFTTN-----h~EkLDPALlRpGRmDmhI~m 367 (457)
T KOG0743 293 EDIDCSFDLRERRKKKKENFEGDLSRVTLSGLLNFLDGLWSSCGDERIIVFTTN-----HKEKLDPALLRPGRMDMHIYM 367 (457)
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEEEEECC-----CHHHCCHHHCCCCCCEEEEEC
T ss_conf 612432304434555664546776606647756641343004887349999468-----710068866288752256672
Q ss_pred CCCCHHHHHHHH
Q ss_conf 687868999999
Q gi|254780163|r 365 SEPSIEDAIEIV 376 (798)
Q Consensus 365 ~ep~~~~~~~iL 376 (798)
T Consensus 368 gyCtf~-~fK~L 378 (457)
T KOG0743 368 GYCTFE-AFKTL 378 (457)
T ss_pred CCCCHH-HHHHH
T ss_conf 669879-99999