HHsearch alignment for GI: 254780163 and conserved domain: KOG0744

Probab=98.32  E-value=1.2e-05  Score=59.68  Aligned_cols=139  Identities=29%  Similarity=0.463  Sum_probs=86.4

Q ss_pred             CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC---------CCCEEEEEH-HHHHCCCCCCHHCCCCCHHCCCCCCCCCC
Q ss_conf             45657874068861432003889999987304---------773377206-88612465301104780002564443100
Q gi|254780163|r  500 LSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL---------GVQLLRFDM-SEYMERHAVSRLIGAPPGYVGFGQGGILA  569 (798)
Q Consensus       500 l~~~~rP~g~flf~GptGvGKTelak~la~~~---------~~~lir~dm-sey~e~~~vs~LiGappGYvG~~egg~Lt  569 (798)
T Consensus       173 lIt~NR---liLlhGPPGTGKTSLCKaLaQkLSIR~~~~y~~~~liEinshsLF------SKW---------FsESgKlV  234 (423)
T KOG0744         173 LITWNR---LILLHGPPGTGKTSLCKALAQKLSIRTNDRYYKGQLIEINSHSLF------SKW---------FSESGKLV  234 (423)
T ss_pred             EEEEEE---EEEEECCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHHHH------HHH---------HHHHHHHH
T ss_conf             466414---899857999882279999987514652376444069997046788------988---------71211389


Q ss_pred             HHH--------HH-CCCEEEEECCHHHC---C--------H----HHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECC
Q ss_conf             355--------51-58517774044550---2--------8----99999999877750217799776125429999424
Q gi|254780163|r  570 DSV--------DQ-NPYSVVLLDEIEKS---H--------P----DVLNILLQIMDYGILTDQSGKKISFRNVILIMTTN  625 (798)
Q Consensus       570 e~v--------r~-~P~sVvl~DEiEKA---h--------~----~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN  625 (798)
T Consensus       235 ~kmF~kI~ELv~d~~~lVfvLIDEVESLa~aR~s~~S~~EpsDaIRvVNalLTQlD--r-------lK~~~NvliL~TSN  305 (423)
T KOG0744         235 AKMFQKIQELVEDRGNLVFVLIDEVESLAAARTSASSRNEPSDAIRVVNALLTQLD--R-------LKRYPNVLILATSN  305 (423)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH--H-------HCCCCCEEEEECCC
T ss_conf             99999999997178968999807878889998754137998218999999999899--8-------60479779996262


Q ss_pred             CCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             21455330368988211148899999872887881776828962889999999999999999999
Q gi|254780163|r  626 AGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLEL  690 (798)
Q Consensus       626 ~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~  690 (798)
T Consensus       306 l~~s---------------------iD----~AfVDRADi~~yVG~Pt~~ai~~IlkscieEL~~  345 (423)
T KOG0744         306 LTDS---------------------ID----VAFVDRADIVFYVGPPTAEAIYEILKSCIEELIS  345 (423)
T ss_pred             HHHH---------------------HH----HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             6777---------------------78----8861175421103896399999999999999986