HHsearch alignment for GI: 254780163 and conserved domain: KOG1969

Probab=96.95  E-value=0.022  Score=36.22  Aligned_cols=172  Identities=22%  Similarity=0.330  Sum_probs=100.5

Q ss_pred             HHCCCCCCCCCCC-EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHH-
Q ss_conf             5204456578740-68861432003889999987304773377206886124653011047800025644431003555-
Q gi|254780163|r  496 ARAGLSDPNKPIG-CYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVD-  573 (798)
Q Consensus       496 ~~~gl~~~~rP~g-~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr-  573 (798)
T Consensus       314 ~~~~~~~s~RP~kKilLL~GppGlGKTTLAHViAkqaGYsVvEINASDeRt~~~v~~kI~----------~avq~~s~l~  383 (877)
T KOG1969         314 LDMELDPSKRPPKKILLLCGPPGLGKTTLAHVIAKQAGYSVVEINASDERTAPMVKEKIE----------NAVQNHSVLD  383 (877)
T ss_pred             HHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH----------HHHHHCCCCC
T ss_conf             632468667984006875368878724799999986285488732555434788999999----------9886411225


Q ss_pred             --HCCCEEEEECCHHHCCHHHHHHHHHHHH-HHHCCCC-CCCEE------C---CCCEEEEEECCCCHHHHHHCCCCCCC
Q ss_conf             --1585177740445502899999999877-7502177-99776------1---25429999424214553303689882
Q gi|254780163|r  574 --QNPYSVVLLDEIEKSHPDVLNILLQIMD-YGILTDQ-SGKKI------S---FRNVILIMTTNAGALEMSKARIGFGS  640 (798)
Q Consensus       574 --~~P~sVvl~DEiEKAh~~v~~~llqild-~G~ltd~-~Gr~v------d---f~n~iii~TsN~G~~~~~~~~~g~~~  640 (798)
T Consensus       384 adsrP~CL-ViDEIDGa~~~~Vdvilslv~a~~k~~~Gkq~~~~~~rkkkr~~~L~RP-IICICNd--------------  447 (877)
T KOG1969         384 ADSRPVCL-VIDEIDGAPRAAVDVILSLVKATNKQATGKQAKKDKKRKKKRSKLLTRP-IICICND--------------  447 (877)
T ss_pred             CCCCCCEE-EEECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHCCCCCCCC-EEEEECC--------------
T ss_conf             68886359-9842468728999999999974161421686632034555304654587-7898647--------------


Q ss_pred             CCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCC
Q ss_conf             1114889999987288788177682896288999999999999999999999866988999889999999718
Q gi|254780163|r  641 SRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEEVINWLVSHG  713 (798)
Q Consensus       641 ~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~  713 (798)
T Consensus       448 -L----YaPaLR~-Lr~-----~A~ii~f~~p~~s~Lv-------~RL~~IC~rE--~mr~d~~aL~~L~el~  500 (877)
T KOG1969         448 -L----YAPALRP-LRP-----FAEIIAFVPPSQSRLV-------ERLNEICHRE--NMRADSKALNALCELT  500 (877)
T ss_pred             -C----CCHHHHH-CCC-----CEEEEEECCCCHHHHH-------HHHHHHHHHH--CCCCCHHHHHHHHHHH
T ss_conf             -5----5533331-021-----0489995699766899-------9999997641--5778878999999986