HHsearch alignment for GI: 254780163 and conserved domain: KOG3347
>KOG3347 consensus.
Probab=96.90 E-value=0.03 Score=35.36 Aligned_cols=121 Identities=22% Similarity=0.394 Sum_probs=68.6
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHHC
Q ss_conf 68861432003889999987304773377206886124653011047800025644431003555158517774044550
Q gi|254780163|r 509 CYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEKS 588 (798)
Q Consensus 509 ~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~~P~sVvl~DEiEKA 588 (798)
T Consensus 9 NILvtGTPG~GKstl~~~lae~~--~~~~i~isd~vkEn~---------l~~gyDE~-----------y~c~i~DE---- 62 (176)
T KOG3347 9 NILVTGTPGTGKSTLAERLAEKT--GLEYIEISDLVKENN---------LYEGYDEE-----------YKCHILDE---- 62 (176)
T ss_pred CEEEECCCCCCCHHHHHHHHHHH--CCCEEEHHHHHHHHC---------CHHCCCCC-----------CCCCCCCH----
T ss_conf 87986799988025999999973--985674556776611---------02102322-----------36754567----
Q ss_pred CHHHHHHHHHHHH-HHHCCCCCCCEE---CCCCEEEEEECCCCH--HHHHHCCCCCCCCCCHHH--------HHHHHHHH
Q ss_conf 2899999999877-750217799776---125429999424214--553303689882111488--------99999872
Q gi|254780163|r 589 HPDVLNILLQIMD-YGILTDQSGKKI---SFRNVILIMTTNAGA--LEMSKARIGFGSSRNDDA--------DKEALRNF 654 (798)
Q Consensus 589 h~~v~~~llqild-~G~ltd~~Gr~v---df~n~iii~TsN~G~--~~~~~~~~g~~~~~~~~~--------~~~~l~~~ 654 (798)
T Consensus 63 -dkv~D~Le~~m~~Gg~IVDyHgCd~FperwfdlVvVLr~~~s~LY~RL--~sRgY~e~Ki~eNiecEIfgv~~eea~eS 139 (176)
T KOG3347 63 -DKVLDELEPLMIEGGNIVDYHGCDFFPERWFDLVVVLRTPNSVLYDRL--KSRGYSEKKIKENIECEIFGVVLEEARES 139 (176)
T ss_pred -HHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEEEECCCHHHHHHH--HHCCCCHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf -899988889875688488600567650113557999946845999999--97588888876510158999999999987
Q ss_pred CCHH
Q ss_conf 8878
Q gi|254780163|r 655 LSPE 658 (798)
Q Consensus 655 f~pe 658 (798)
T Consensus 140 y~~~ 143 (176)
T KOG3347 140 YSPK 143 (176)
T ss_pred CCCC
T ss_conf 1874