HHsearch alignment for GI: 254780163 and conserved domain: PRK00411

Probab=99.32  E-value=2e-09  Score=86.93  Aligned_cols=228  Identities=21%  Similarity=0.297  Sum_probs=148.3

Q ss_pred             HHHHHHHHHHHHHHHHH----CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHH----------H
Q ss_conf             22217899999999862----267787489667641166899999999854898834520144554046----------7
Q gi|254780163|r  205 ILVGRHEEINRTIQILC----RRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMG----------N  270 (798)
Q Consensus       205 PVIGRd~EI~riiqIL~----RR~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~----------~  270 (798)
T Consensus        31 ~l~~Re~Ei~~l~~~l~~~l~g~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~-----~~~~vyINc~~~~t~~~i~~~  105 (394)
T PRK00411         31 NLPHREEQIEELAFALRPALRGSRPSNVLILGPPGTGKTTTVKKVFEELEEAAL-----KVVYVYINCQIDRTRYAILSE  105 (394)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC-----CCEEEEEECCCCCCHHHHHHH
T ss_conf             898859999999999999975999984799889999899999999999997468-----965999969668989999999


Q ss_pred             H---HCCCC--CCCH-HHHHHHHHHHHHCCCCC-EEEEECCHHHHHCCCCCCCCCCCHHHHHH-H-HHCCCCEEEEEECC
Q ss_conf             5---30634--3123-78999999987203898-39997361663015544434477788887-6-63026603887304
Q gi|254780163|r  271 L---IAGTR--YRGD-FEERIKKIVKEIESYAN-AILYIDEIHTLVGAGSASGISVDASNLLK-P-ALSSGAVRCIGSTT  341 (798)
Q Consensus       271 l---~ag~~--~rg~-fe~r~~~~~~~~~~~~~-~ilfideih~ligag~~~g~~~d~an~lk-P-~L~rg~~~~IgatT  341 (798)
T Consensus       106 i~~~L~~~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~---~~~~~~-vLY~L~r~~~~~~~~~~~vI~IsN  181 (394)
T PRK00411        106 IARSLFGHPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLV---EKEGND-VLYSLLRAHEEYPGARIGVIGISS  181 (394)
T ss_pred             HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC---CCCCCH-HHHHHHHCCCCCCCCCEEEEEEEC
T ss_conf             9999569989877878999999999986166975899996554020---366508-999998540226887389999976


Q ss_pred             HHHHHHHHHCCHHHHHHC--EEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             899999852011143200--144306878689999998612766541035121117899999865420155564679889
Q gi|254780163|r  342 YSEYRQFFEKDKALVRRF--QKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDV  419 (798)
Q Consensus       342 ~~ey~~~~e~d~al~rrF--~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidl  419 (798)
T Consensus       182 ~~~~~~~L--dprv~S~l~~~~i~F~PY~~~qL~~IL~~R~~--~af~~gv~~~~~i~~~A~~~a~~~GD---aR~Aldl  254 (394)
T PRK00411        182 DLTFLYIL--DPRVKSVFGPEEIVFPPYTADEIFDILKDRVE--EGFYPGVVSDEVLELIADLTGREHGD---ARVAIDL  254 (394)
T ss_pred             CCCHHHHH--HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH--HCCCCCCCCHHHHHHHHHHHHHCCCC---HHHHHHH
T ss_conf             87177664--07775027862898589998999999999998--41455678978999999998550475---8999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf             986533332114432211365789998663102
Q gi|254780163|r  420 IDEAGASQILQPLSKRRKFITEKDIKKTIASMN  452 (798)
Q Consensus       420 lDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~  452 (798)
T Consensus       255 lr~A~e~Ae----~~g~~~Vt~~hV~~A~~~~~  283 (394)
T PRK00411        255 LRRAGEIAE----REGSRKVTEEDVRKAYEKSE  283 (394)
T ss_pred             HHHHHHHHH----HHCCCCCCHHHHHHHHHHHH
T ss_conf             999999999----71899658999999999860