HHsearch alignment for GI: 254780163 and conserved domain: PRK03992

>PRK03992 proteasome-activating nucleotidase; Provisional.
Probab=99.60  E-value=3.7e-13  Score=113.67  Aligned_cols=217  Identities=23%  Similarity=0.340  Sum_probs=142.3

Q ss_pred             HHHHHHHHHHHHHHHHHH-------------CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHH
Q ss_conf             122217899999999862-------------2677874896676411668999999998548988345201445540467
Q gi|254780163|r  204 DILVGRHEEINRTIQILC-------------RRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGN  270 (798)
Q Consensus       204 DPVIGRd~EI~riiqIL~-------------RR~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~  270 (798)
T Consensus       132 ~dIGGl~~~k~el~E~velPl~~pe~f~~~Gi~pPkGvLLyGPPGtGKTllAkAvA~e----------~~~~fi~v~~s~  201 (390)
T PRK03992        132 EDIGGLDEQIREVREAVELPLKNPELFEEVGIEPPKGVLLYGPPGTGKTLLAKAVAHE----------TNATFIRVVGSE  201 (390)
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH----------HCCCEEEEEHHH
T ss_conf             6614989999999999999865989999769999972786898999789999999987----------488879966799


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCC--HHHHHHHHH-------CCCCEEEEEECC
Q ss_conf             53063431237899999998720389839997361663015544434477--788887663-------026603887304
Q gi|254780163|r  271 LIAGTRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVD--ASNLLKPAL-------SSGAVRCIGSTT  341 (798)
Q Consensus       271 l~ag~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d--~an~lkP~L-------~rg~~~~IgatT  341 (798)
T Consensus       202 l~s--k~vGesek~vr~lF~~Ar~~aP~IiFiDEiDai~~~R~~~~~~g~~ev~r~l~qLL~emDG~~~~~~V~VIaATN  279 (390)
T PRK03992        202 LVQ--KFIGEGARLVRELFELAREKAPSIIFIDEIDAIAAKRTDSGTSGDREVQRTLMQLLAEMDGFDPRGNVKIIAATN  279 (390)
T ss_pred             HHH--CCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
T ss_conf             752--454179999999999999709908971432566335677888620889999999999744877778827996069


Q ss_pred             HHHHHHHHHCCHHHHH--HCE-EEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCH-HHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf             8999998520111432--001-4430687868999999861276654103512111-78999998654201555646798
Q gi|254780163|r  342 YSEYRQFFEKDKALVR--RFQ-KIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKE-AIRAAVQLSVRHFTSRKLPDKAI  417 (798)
Q Consensus       342 ~~ey~~~~e~d~al~r--rF~-~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~-al~~av~ls~ryi~~r~lPdkAi  417 (798)
T Consensus       280 rpd-----~LDpAllRpGRFDr~I~iplPd~~~R~~Ilki~~~------~~~l~~dvdl~~lA~~T~G~S------GADI  342 (390)
T PRK03992        280 RPD-----ILDPALLRPGRFDRIIEVPLPDEEGRLEILKIHTR------KMNLADDVDLEELAELTEGAS------GADL  342 (390)
T ss_pred             CCH-----HCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHC------CCCCCCCCCHHHHHHHCCCCC------HHHH
T ss_conf             810-----05977754776523887089499999999999847------999998889999997687998------9999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf             89986533332114432211365789998663102
Q gi|254780163|r  418 DVIDEAGASQILQPLSKRRKFITEKDIKKTIASMN  452 (798)
Q Consensus       418 dllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~  452 (798)
T Consensus       343 ~---~lc~EA~m~Air~~r~~i~~~Df~~Ai~kv~  374 (390)
T PRK03992        343 K---AICTEAGMFAIRDDRTEVTMEDFLKAIEKVM  374 (390)
T ss_pred             H---HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf             9---9999999999985898608999999999996