HHsearch alignment for GI: 254780163 and conserved domain: PRK05022
>PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional.
Probab=97.55 E-value=0.00032 Score=49.47 Aligned_cols=151 Identities=22% Similarity=0.311 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHC--CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHH--------HCC
Q ss_conf 222178999999998622--6778748966764116689999999985489883452014455404675--------306
Q gi|254780163|r 205 ILVGRHEEINRTIQILCR--RSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNL--------IAG 274 (798)
Q Consensus 205 PVIGRd~EI~riiqIL~R--R~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l--------~ag 274 (798)
T Consensus 187 elIG~S~~m~~l~~~i~~vA~sd~pVLI~GEtGTGKelvAr~IH~~S-------~R~~~Pfv~vNCaalpe~l~EseLFG 259 (510)
T PRK05022 187 EMIGQSPAMQQLKKEIEVVAASDLNVLITGETGVGKELVARAIHQAS-------PRAVKPLVYLNCAALPESLAESELFG 259 (510)
T ss_pred CEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCC-------CCCCCCCEEEECCCCCHHHHHHHHCC
T ss_conf 75208999999999999996899988988989813999999999668-------87899857888999985678998659
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCC-------------EEEEEECC
Q ss_conf 34312378999999987203898399973616630155444344777888876630266-------------03887304
Q gi|254780163|r 275 TRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSGA-------------VRCIGSTT 341 (798)
Q Consensus 275 ~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg~-------------~~~IgatT 341 (798)
T Consensus 260 -h~kGaFtGA~~~r~G~fe~A~gGTLfLDEI~~L---------pl~~Q~KLLrvLq~g~iqrvG~~~~~~vdvRIIAATn 329 (510)
T PRK05022 260 -HVKGAFTGAISNRSGKFELADGGTLFLDEIGEL---------PLALQAKLLRVLQYGEIQRVGSDRSLRVDVRVIAATN 329 (510)
T ss_pred -CCCCCCCCCCCCCCCCEEECCCCEEEEECHHHC---------CHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEECC
T ss_conf -777886886556788101778987987574549---------9999999999984795885589946666689996078
Q ss_pred HHHHHHHHHCCH---HHHHHCEEEEECCCCHHHHH
Q ss_conf 899999852011---14320014430687868999
Q gi|254780163|r 342 YSEYRQFFEKDK---ALVRRFQKIDVSEPSIEDAI 373 (798)
Q Consensus 342 ~~ey~~~~e~d~---al~rrF~~i~v~ep~~~~~~ 373 (798)
T Consensus 330 rd-L~~~V~~G~FR~DLYyRLsv~~I~vPPLRER~ 363 (510)
T PRK05022 330 RD-LREEVLAGRFRADLYHRLSVFPLPVPPLRERG 363 (510)
T ss_pred CC-HHHHHHCCCHHHHHHHHHHCCCCCCCCHHHCH
T ss_conf 35-99998839638999987620403480865555