HHsearch alignment for GI: 254780163 and conserved domain: PRK05648
>PRK05648 DNA polymerase III subunits gamma and tau; Reviewed.
Probab=98.71 E-value=2.4e-08 Score=79.14 Aligned_cols=197 Identities=21% Similarity=0.271 Sum_probs=124.7
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEECCCCCHHHHHHHHHHHHHHCCCCCHHH-HE-------------E
Q ss_conf 7754861122217899999999862267787-4896676411668999999998548988345-20-------------1
Q gi|254780163|r 197 KVKKGKVDILVGRHEEINRTIQILCRRSKNN-PLYVGDPGVGKTAIAEGFAKQIVDGMVPDIL-LG-------------A 261 (798)
Q Consensus 197 ~AreGKLDPVIGRd~EI~riiqIL~RR~KNn-~~lvG~~gvGktaive~la~~i~~~~vp~~l-~~-------------~ 261 (798)
T Consensus 9 k~rp~~f~~~~gq~~~~~~l~~~~~~~~~~~a~l~~g~rg~gkt~~ar~~ak~lnc~~~~~~~pc~~c~~c~~i~~~~~~ 88 (705)
T PRK05648 9 KWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAKCLNCETGVSSTPCGECSVCREIDEGRFV 88 (705)
T ss_pred HHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 31787576632819999999999970986304650078988898999999998677899988978776004666248977
Q ss_pred EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC---CCC-EEEEECCHHHHHCCCCCCCCCCCHHH-HHHHHHC--CCCE
Q ss_conf 445540467530634312378999999987203---898-39997361663015544434477788-8876630--2660
Q gi|254780163|r 262 RIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES---YAN-AILYIDEIHTLVGAGSASGISVDASN-LLKPALS--SGAV 334 (798)
Q Consensus 262 ~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~---~~~-~ilfideih~ligag~~~g~~~d~an-~lkP~L~--rg~~ 334 (798)
T Consensus 89 d~~e~d~as------~~~v--~~~r~~~~~~~~~p~~~~~kv~~idevhmls---------~~~fnallk-tleepp~~v 150 (705)
T PRK05648 89 DLIEVDAAS------RTKV--EDTRELLDNVQYAPTRGRYKVYLIDEVHMLS---------SHSFNALLK-TLEEPPPHV 150 (705)
T ss_pred CEEEECCCC------CCCH--HHHHHHHHHCCCCCCCCCEEEEEEEHHHHCC---------HHHHHHHHH-HCCCCCCCE
T ss_conf 634451554------4788--9999999855517767745799984265417---------999999987-404797545
Q ss_pred EEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 38873048999998520111432001443068786899999986127665410351211178999998654201555646
Q gi|254780163|r 335 RCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPD 414 (798)
Q Consensus 335 ~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPd 414 (798)
T Consensus 151 ~f~~att~~~--k~--p~t~~sr-c~~~~~~~~~~~~~~~~l~~~~----~~e~~~~~~~~~~~~~~~~~g~~rd----- 216 (705)
T PRK05648 151 KFLLATTDPQ--KL--PVTILSR-CLQFSLKNMSPERVVEHLSHVL----GAENVPFEEDALWLLGRAADGSMRD----- 216 (705)
T ss_pred EEEEECCCHH--HC--CHHHHHH-HHHCCCCCCCHHHHHHHHHHHH----HHCCCCCCHHHHHHHHHHCCCCHHH-----
T ss_conf 9998428735--37--5899976-6430236899999999999999----9759977899999999974896777-----
Q ss_pred HHHHHHHHHHHH
Q ss_conf 798899865333
Q gi|254780163|r 415 KAIDVIDEAGAS 426 (798)
Q Consensus 415 kAidllDea~a~ 426 (798)
T Consensus 217 -~ls~~dq~~~~ 227 (705)
T PRK05648 217 -AMSLTDQAIAF 227 (705)
T ss_pred -HHHHHHHHHHC
T ss_conf -99999999860