HHsearch alignment for GI: 254780163 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.30 E-value=9.8e-11 Score=96.29 Aligned_cols=215 Identities=22% Similarity=0.256 Sum_probs=146.2
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCC-CCHH------------H-
Q ss_conf 58877548611222178999999998622677874-8966764116689999999985489-8834------------5-
Q gi|254780163|r 194 LTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGM-VPDI------------L- 258 (798)
Q Consensus 194 LTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~-vp~~------------l- 258 (798)
T Consensus 7 larKYRP~~F~dvVGQ~~vv~~L~nai~~~ri~HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~C~~I~~ 86 (462)
T PRK06305 7 SSRKYRPQTFSEILGQDAVVTVLKNALRFNRAAHAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAICKEISS 86 (462)
T ss_pred HHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 88763889876604909999999999984997623430389985999999999999679999888898876688899863
Q ss_pred -HEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC---CCC-EEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHC--C
Q ss_conf -201445540467530634312378999999987203---898-399973616630155444344777888876630--2
Q gi|254780163|r 259 -LGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES---YAN-AILYIDEIHTLVGAGSASGISVDASNLLKPALS--S 331 (798)
Q Consensus 259 -~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~---~~~-~ilfideih~ligag~~~g~~~d~an~lkP~L~--r 331 (798)
T Consensus 87 g~~~DViEiD------aAs~~gV--ddIRel~e~v~~~P~~~~yKVyIIDEvhmL---------s~~AfNALLKtLEEPP 149 (462)
T PRK06305 87 GTSLDVIEID------GASHRGI--EDIRQINETVLFTPSKSQYKIYIIDEVHML---------TKEAFNSLLKTLEEPP 149 (462)
T ss_pred CCCCCEEEEC------CCCCCCH--HHHHHHHHHHCCCCCCCCEEEEEEECHHHC---------CHHHHHHHHHHHHCCC
T ss_conf 8999868643------5534466--899999977100886775059998152117---------9999999999861898
Q ss_pred CCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCC
Q ss_conf 66038873048999998520111432001443068786899999986127665410351211178999998654201555
Q gi|254780163|r 332 GAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRK 411 (798)
Q Consensus 332 g~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~ 411 (798)
T Consensus 150 ~~v~FILaTTe~~--KIp---~TIlSRCQrf~F~~i~~~~I~~~L~~I~~----~E~i~~e~~AL~lIA~~a~GsmRD-- 218 (462)
T PRK06305 150 QHVKFFLATTEIH--KIP---GTILSRCQKMHLKRIPEETIIDKLALIAQ----QDGIETSREALLPIARAAQGSLRD-- 218 (462)
T ss_pred CCEEEEEEECCHH--HCC---HHHHHHHHEEECCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHCCCCHHH--
T ss_conf 7749999818814--285---47876540233257999999999999999----839985999999999985895878--
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 6467988998653333211443221136578999866
Q gi|254780163|r 412 LPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTI 448 (798)
Q Consensus 412 lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~ 448 (798)
T Consensus 219 ----AlslLDQ~i~~~--------~~~it~~~V~~~l 243 (462)
T PRK06305 219 ----AESLYDYVVGLF--------PKSLSPDTVAKAL 243 (462)
T ss_pred ----HHHHHHHHHHHC--------CCCCCHHHHHHHH
T ss_conf ----999999999847--------9986899999986