HHsearch alignment for GI: 254780163 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.13 E-value=2.1e-09 Score=86.76 Aligned_cols=215 Identities=23% Similarity=0.274 Sum_probs=142.0
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEECCCCCHHHHHHHHHHHHHHCCC----CCH----H-------H--
Q ss_conf 7754861122217899999999862267787-48966764116689999999985489----883----4-------5--
Q gi|254780163|r 197 KVKKGKVDILVGRHEEINRTIQILCRRSKNN-PLYVGDPGVGKTAIAEGFAKQIVDGM----VPD----I-------L-- 258 (798)
Q Consensus 197 ~AreGKLDPVIGRd~EI~riiqIL~RR~KNn-~~lvG~~gvGktaive~la~~i~~~~----vp~----~-------l-- 258 (798)
T Consensus 14 KyRP~~f~~liGQ~~~~~~l~n~i~~~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c~~c~~i~~ 93 (507)
T PRK06645 14 KYRPSNFAELQGQEVLVKVLSYTILNDRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKCTNCISFNN 93 (507)
T ss_pred CCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 00799765623939999999999973996634774587997889999999999679998888998888888767899865
Q ss_pred -HEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCC---CC-EEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHC--C
Q ss_conf -2014455404675306343123789999999872038---98-399973616630155444344777888876630--2
Q gi|254780163|r 259 -LGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESY---AN-AILYIDEIHTLVGAGSASGISVDASNLLKPALS--S 331 (798)
Q Consensus 259 -~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~---~~-~ilfideih~ligag~~~g~~~d~an~lkP~L~--r 331 (798)
T Consensus 94 ~~~~dv~EiDaas------~~g--v~~ir~l~~~~~~~p~~~~~kv~iidE~hml---------s~~a~nallktlEepp 156 (507)
T PRK06645 94 HNHPDIIEIDAAS------KTS--VDDIRRIIESAEYKPLQGKHKIFIIDEVHML---------SKGAFNALLKTLEEPP 156 (507)
T ss_pred CCCCCEEEEECCC------CCC--HHHHHHHHHHCCCCCCCCCEEEEEECCHHHC---------CHHHHHHHHHHHHCCC
T ss_conf 8999859963788------888--8999999863551787674358995214224---------8999999999742786
Q ss_pred CCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCC
Q ss_conf 66038873048999998520111432001443068786899999986127665410351211178999998654201555
Q gi|254780163|r 332 GAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRK 411 (798)
Q Consensus 332 g~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~ 411 (798)
T Consensus 157 ~~~~Fi~atte~--~ki--p~-ti~srcq~f~~~~i~~~~i~~~l~~i~~~----E~~~~~~~al~~ia~~a~Gs~RD-- 225 (507)
T PRK06645 157 PHIIFIFATTEV--QKI--PA-TIISRCQRYDLRRLSFEEIFKLLEYITKQ----ENLKADIEALRIIAYKSEGSARD-- 225 (507)
T ss_pred CCEEEEEECCCH--HHC--CH-HHHHHCEEEEEECCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH--
T ss_conf 443899974853--648--37-88854327875459979999999999997----68777789999999855998678--
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 6467988998653333211443221136578999866
Q gi|254780163|r 412 LPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTI 448 (798)
Q Consensus 412 lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~ 448 (798)
T Consensus 226 ----alslldqai~~~-----~~~~~~I~~~~V~~ML 253 (507)
T PRK06645 226 ----AVSILDQAASMS-----AKSDNIISPQVINQML 253 (507)
T ss_pred ----HHHHHHHHHHHH-----CCCCCCCCHHHHHHHH
T ss_conf ----999999999975-----4898702699999983