HHsearch alignment for GI: 254780163 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.32 E-value=6.2e-11 Score=97.72 Aligned_cols=214 Identities=21% Similarity=0.251 Sum_probs=143.9
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCHH-----------H-H--
Q ss_conf 8877548611222178999999998622677874-89667641166899999999854898834-----------5-2--
Q gi|254780163|r 195 TEKVKKGKVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPDI-----------L-L-- 259 (798)
Q Consensus 195 Te~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~~-----------l-~-- 259 (798)
T Consensus 7 a~KYRP~~F~dvvGQe~vv~~L~nai~~~rl~HAyLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~~i~~g~ 86 (560)
T PRK06647 7 ATKRRPRDFNSLEGQDFVVETLKHSIEKNKIANAYIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCKSIDNDS 86 (560)
T ss_pred HHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 76428986544039499999999999749977436632899878999999999996599999988887887888874599
Q ss_pred EEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCC---C-CEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHC--CCC
Q ss_conf 014455404675306343123789999999872038---9-8399973616630155444344777888876630--266
Q gi|254780163|r 260 GARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESY---A-NAILYIDEIHTLVGAGSASGISVDASNLLKPALS--SGA 333 (798)
Q Consensus 260 ~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~---~-~~ilfideih~ligag~~~g~~~d~an~lkP~L~--rg~ 333 (798)
T Consensus 87 ~~DviEidaa------sn~~V--ddIR~l~e~v~~~P~~~~yKV~IIDEahmL---------t~~A~NALLKtLEEPP~~ 149 (560)
T PRK06647 87 SLDVIEIDGA------SNTSV--QDVRQIKEEIMFPPASSRYRVYIIDEVHML---------SNSAFNALLKTIEEPPPY 149 (560)
T ss_pred CCCEEEECCC------CCCCH--HHHHHHHHHHCCCCCCCCEEEEEECCHHHC---------CHHHHHHHHHHHHCCCCC
T ss_conf 9875764364------54888--999999998632876687069996465655---------999999999986348875
Q ss_pred EEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCH
Q ss_conf 03887304899999852011143200144306878689999998612766541035121117899999865420155564
Q gi|254780163|r 334 VRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLP 413 (798)
Q Consensus 334 ~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lP 413 (798)
T Consensus 150 ~~FILaTte~--~KI~~---TI~SRCQ~f~Fk~i~~~~I~~~L~~I~~~----E~i~~e~~AL~lIa~~a~Gs~RD---- 216 (560)
T PRK06647 150 IVFIFATTEV--HKLPA---TIKSRCQHFNFRLLSLEKIYEMLKKVCLE----DDIKYEDEALKWIAYKSGGSVRD---- 216 (560)
T ss_pred EEEEEECCCH--HHCHH---HHHHHHEEEECCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH----
T ss_conf 5999977994--76848---99965104105559999999999999986----79887999999999977895888----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 67988998653333211443221136578999866
Q gi|254780163|r 414 DKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTI 448 (798)
Q Consensus 414 dkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~ 448 (798)
T Consensus 217 --alslldq~i~~~--------~~~i~~~~v~~~l 241 (560)
T PRK06647 217 --AYTLFDQIVSFS--------NSDITLEQIRSKM 241 (560)
T ss_pred --HHHHHHHHHHCC--------CCCCCHHHHHHHH
T ss_conf --999999999607--------9977899999986