HHsearch alignment for GI: 254780163 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.84 E-value=9.5e-07 Score=67.64 Aligned_cols=129 Identities=25% Similarity=0.387 Sum_probs=79.4
Q ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC-CCCEEE-------EEHHHHHCCCC
Q ss_conf 6653458999999999877520445657874068861432003889999987304-773377-------20688612465
Q gi|254780163|r 477 TVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL-GVQLLR-------FDMSEYMERHA 548 (798)
Q Consensus 477 ~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~-~~~lir-------~dmsey~e~~~ 548 (798)
T Consensus 16 ~dvvGQe~vv~~L~nai~~~rl--------~HAyLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~~i~~g~~ 87 (560)
T PRK06647 16 NSLEGQDFVVETLKHSIEKNKI--------ANAYIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCKSIDNDSS 87 (560)
T ss_pred HHHCCCHHHHHHHHHHHHCCCC--------CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 4403949999999999974997--------74366328998789999999999965999999888878878888745999
Q ss_pred --CCHHCCCCCHHCCCCCCCCCCHHHHHCC----CEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEE
Q ss_conf --3011047800025644431003555158----5177740445502899999999877750217799776125429999
Q gi|254780163|r 549 --VSRLIGAPPGYVGFGQGGILADSVDQNP----YSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIM 622 (798)
Q Consensus 549 --vs~LiGappGYvG~~egg~Lte~vr~~P----~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~ 622 (798)
T Consensus 88 ~DviEidaa--sn~~VddIR~l~e~v~~~P~~~~yKV~IIDEahmLt~~A~NALLKtLEEPP-----------~~~~FIL 154 (560)
T PRK06647 88 LDVIEIDGA--SNTSVQDVRQIKEEIMFPPASSRYRVYIIDEVHMLSNSAFNALLKTIEEPP-----------PYIVFIF 154 (560)
T ss_pred CCEEEECCC--CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCC-----------CCEEEEE
T ss_conf 875764364--548889999999986328766870699964656559999999999863488-----------7559999
Q ss_pred ECCC
Q ss_conf 4242
Q gi|254780163|r 623 TTNA 626 (798)
Q Consensus 623 TsN~ 626 (798)
T Consensus 155 aTte 158 (560)
T PRK06647 155 ATTE 158 (560)
T ss_pred ECCC
T ss_conf 7799