HHsearch alignment for GI: 254780163 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.30 E-value=1.9e-10 Score=94.26 Aligned_cols=213 Identities=23% Similarity=0.335 Sum_probs=140.3
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCHH-----------HHE---
Q ss_conf 877548611222178999999998622677874-89667641166899999999854898834-----------520---
Q gi|254780163|r 196 EKVKKGKVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPDI-----------LLG--- 260 (798)
Q Consensus 196 e~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~~-----------l~~--- 260 (798)
T Consensus 8 rkyRP~~F~dvvGQ~~v~~~L~nai~~~ri~HAyLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~C~~C~~i~~g~~ 87 (563)
T PRK06674 8 RVFRPQKFEDVVGQEHVTKTLQNALLQEKVSHAYLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNECPSCLGITNGSI 87 (563)
T ss_pred HHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 76389976552480999999999998499650343128998689999999999857999999887766878999855899
Q ss_pred EEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC---CC-CEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC--CCE
Q ss_conf 1445540467530634312378999999987203---89-83999736166301554443447778888766302--660
Q gi|254780163|r 261 ARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES---YA-NAILYIDEIHTLVGAGSASGISVDASNLLKPALSS--GAV 334 (798)
Q Consensus 261 ~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~---~~-~~ilfideih~ligag~~~g~~~d~an~lkP~L~r--g~~ 334 (798)
T Consensus 88 ~DviEiDaas------n~gV--d~IR~i~~~v~~~P~~~~yKV~IIDeah~L---------t~~A~NALLKtLEEPP~~v 150 (563)
T PRK06674 88 SDVLEIDAAS------NNGV--DEIRDIRDKVKFAPSAVEYKVYIIDEVHML---------SIGAFNALLKTLEEPPGHV 150 (563)
T ss_pred CCEEEECCCC------CCCH--HHHHHHHHHHCCCCCCCCEEEEEEECHHHC---------CHHHHHHHHHHHHCCCCCE
T ss_conf 8779852555------5787--999999998264886787379998545637---------9999999999863887564
Q ss_pred EEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 38873048999998520111432001443068786899999986127665410351211178999998654201555646
Q gi|254780163|r 335 RCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPD 414 (798)
Q Consensus 335 ~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPd 414 (798)
T Consensus 151 iFILaTtep~--ki---~~TI~SRCQrf~F~ri~~~~i~~rL~~I~~----~E~i~~~~~aL~~Ia~~a~GsmRD----- 216 (563)
T PRK06674 151 IFILATTEPH--KI---PPTIISRCQRFDFRRISVNDIVERLSTVVT----NEGTQVEDEALQIIARAADGGMRD----- 216 (563)
T ss_pred EEEEECCCHH--HC---CHHHHHHHEEEECCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHCCCCHHH-----
T ss_conf 9999659947--58---478873310312788999999999999999----849998788999999976997889-----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 7988998653333211443221136578999866
Q gi|254780163|r 415 KAIDVIDEAGASQILQPLSKRRKFITEKDIKKTI 448 (798)
Q Consensus 415 kAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~ 448 (798)
T Consensus 217 -AlsiLdQ~~s~~--------~~~i~~~~v~~~l 241 (563)
T PRK06674 217 -ALSLLDQAISFS--------DERVTTEDVLAVT 241 (563)
T ss_pred -HHHHHHHHHHHC--------CCCCCHHHHHHHH
T ss_conf -999999999715--------9976899999986