HHsearch alignment for GI: 254780163 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=98.21 E-value=2.6e-05 Score=57.38 Aligned_cols=129 Identities=20% Similarity=0.223 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC---CCCEEEEEHHHHHCCCCCCHHCCCCC
Q ss_conf 458999999999877520445657874068861432003889999987304---77337720688612465301104780
Q gi|254780163|r 481 GQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL---GVQLLRFDMSEYMERHAVSRLIGAPP 557 (798)
Q Consensus 481 GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~---~~~lir~dmsey~e~~~vs~LiGapp 557 (798)
T Consensus 160 sprenm~~i~~~~~~fi~~F~~---~~~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L~~~l~~~~~~---- 232 (330)
T PRK06835 160 SPRENMENILEKCLNFIKNFDK---NNENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDELIENLREIRFN---- 232 (330)
T ss_pred CHHHHHHHHHHHHHHHHHHCCC---CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCC----
T ss_conf 9899999999999999872478---888669889999988999999999999879949996299999999997545----
Q ss_pred HHCCCCCC--CCCCHHHHHCCCEEEEECCH--HHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHH
Q ss_conf 00256444--31003555158517774044--550289999999987775021779977612542999942421455330
Q gi|254780163|r 558 GYVGFGQG--GILADSVDQNPYSVVLLDEI--EKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSK 633 (798)
Q Consensus 558 GYvG~~eg--g~Lte~vr~~P~sVvl~DEi--EKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~ 633 (798)
T Consensus 233 -----~~~~~~~~~~~l~~--~DLLIIDDLG~E~~t~~~~~~Lf~iIN~-R~~~~---------k~tIITTNl~~~eL~~ 295 (330)
T PRK06835 233 -----NDNDAPELEDLLIN--CDLLIIDDLGTESITEFSKTELFNLINK-RLLMN---------KKMIISTNLSLEELLK 295 (330)
T ss_pred -----CCCCHHHHHHHHHH--CCEEEEECCCCCCCCHHHHHHHHHHHHH-HHHCC---------CCEEEECCCCHHHHHH
T ss_conf -----76448999999961--8989972103455886899999999999-98679---------9979988999899999