HHsearch alignment for GI: 254780163 and conserved domain: PRK06871

>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=97.69  E-value=0.00033  Score=49.37  Aligned_cols=160  Identities=18%  Similarity=0.259  Sum_probs=95.1

Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHCCCCCHHH-------------HEE--EEEEEEHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             74896676411668999999998548988345-------------201--445540467530634312378999999987
Q gi|254780163|r  227 NPLYVGDPGVGKTAIAEGFAKQIVDGMVPDIL-------------LGA--RIFSLDMGNLIAGTRYRGDFEERIKKIVKE  291 (798)
Q Consensus       227 n~~lvG~~gvGktaive~la~~i~~~~vp~~l-------------~~~--~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~  291 (798)
T Consensus        25 A~L~~G~~G~Gk~~la~~~a~~llC~~-~~~~~~Cg~C~sC~l~~~g~HPD~~~i~~~---~~k~I-~-v-d~IR~l~~~   97 (324)
T PRK06871         25 ALLFKADSGLGTEQLIRALAQWLMCQA-PGDEQPCGQCHSCHLFQAGNHPDFHILEPI---DGKDI-G-V-DQVREINEK   97 (324)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHCCCCCCEEEEECC---CCCCC-C-H-HHHHHHHHH
T ss_conf             787689999789999999999982899-999998888989999973899987998467---88878-8-9-999999999


Q ss_pred             HCC----CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEEC
Q ss_conf             203----8983999736166301554443447778888766302--6603887304899999852011143200144306
Q gi|254780163|r  292 IES----YANAILYIDEIHTLVGAGSASGISVDASNLLKPALSS--GAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVS  365 (798)
Q Consensus       292 ~~~----~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~r--g~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~  365 (798)
T Consensus        98 ~~~~~~~g~~KV~iI~~ae~m---------~~~AaNALLKtLEEPp~~~~fiL~t~~~--~~---ll~TI~SRCq~~~~~  163 (324)
T PRK06871         98 VSQFAQQGGNKVVYIQGAERL---------TEAAANALLKTLEEPRPNTYFLLQADLS--AS---LLATIYSRCQTWLIH  163 (324)
T ss_pred             HHHCCCCCCCEEEEECCHHHH---------HHHHHHHHHHHHCCCCCCEEEEEEECCC--CC---CCCHHHHCCCCEECC
T ss_conf             864622059669997588885---------7999999999833898783899987870--10---324086266120089


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             878689999998612766541035121117899999865420155564679889986
Q gi|254780163|r  366 EPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDE  422 (798)
Q Consensus       366 ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDe  422 (798)
T Consensus       164 ~p~~~~~~~wL~~~~---------~~~~~~~~~al~~~------~g~pl~A~~~~~~  205 (324)
T PRK06871        164 VPEEQIALDWLQAQS---------SGEIQEIQTALRIN------YGRPLLALTFLEQ  205 (324)
T ss_pred             CCCHHHHHHHHHHHC---------CCCHHHHHHHHHHC------CCCHHHHHHHHCC
T ss_conf             949999999999746---------88729999999976------9987999998687