HHsearch alignment for GI: 254780163 and conserved domain: PRK06871
>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=97.69 E-value=0.00033 Score=49.37 Aligned_cols=160 Identities=18% Similarity=0.259 Sum_probs=95.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCHHH-------------HEE--EEEEEEHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 74896676411668999999998548988345-------------201--445540467530634312378999999987
Q gi|254780163|r 227 NPLYVGDPGVGKTAIAEGFAKQIVDGMVPDIL-------------LGA--RIFSLDMGNLIAGTRYRGDFEERIKKIVKE 291 (798)
Q Consensus 227 n~~lvG~~gvGktaive~la~~i~~~~vp~~l-------------~~~--~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~ 291 (798)
T Consensus 25 A~L~~G~~G~Gk~~la~~~a~~llC~~-~~~~~~Cg~C~sC~l~~~g~HPD~~~i~~~---~~k~I-~-v-d~IR~l~~~ 97 (324)
T PRK06871 25 ALLFKADSGLGTEQLIRALAQWLMCQA-PGDEQPCGQCHSCHLFQAGNHPDFHILEPI---DGKDI-G-V-DQVREINEK 97 (324)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHCCCCCCEEEEECC---CCCCC-C-H-HHHHHHHHH
T ss_conf 787689999789999999999982899-999998888989999973899987998467---88878-8-9-999999999
Q ss_pred HCC----CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEEC
Q ss_conf 203----8983999736166301554443447778888766302--6603887304899999852011143200144306
Q gi|254780163|r 292 IES----YANAILYIDEIHTLVGAGSASGISVDASNLLKPALSS--GAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVS 365 (798)
Q Consensus 292 ~~~----~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~r--g~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ 365 (798)
T Consensus 98 ~~~~~~~g~~KV~iI~~ae~m---------~~~AaNALLKtLEEPp~~~~fiL~t~~~--~~---ll~TI~SRCq~~~~~ 163 (324)
T PRK06871 98 VSQFAQQGGNKVVYIQGAERL---------TEAAANALLKTLEEPRPNTYFLLQADLS--AS---LLATIYSRCQTWLIH 163 (324)
T ss_pred HHHCCCCCCCEEEEECCHHHH---------HHHHHHHHHHHHCCCCCCEEEEEEECCC--CC---CCCHHHHCCCCEECC
T ss_conf 864622059669997588885---------7999999999833898783899987870--10---324086266120089
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 878689999998612766541035121117899999865420155564679889986
Q gi|254780163|r 366 EPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDE 422 (798)
Q Consensus 366 ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDe 422 (798)
T Consensus 164 ~p~~~~~~~wL~~~~---------~~~~~~~~~al~~~------~g~pl~A~~~~~~ 205 (324)
T PRK06871 164 VPEEQIALDWLQAQS---------SGEIQEIQTALRIN------YGRPLLALTFLEQ 205 (324)
T ss_pred CCCHHHHHHHHHHHC---------CCCHHHHHHHHHHC------CCCHHHHHHHHCC
T ss_conf 949999999999746---------88729999999976------9987999998687