HHsearch alignment for GI: 254780163 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.30 E-value=6.7e-11 Score=97.47 Aligned_cols=200 Identities=23% Similarity=0.257 Sum_probs=138.5
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCHH------------HHE
Q ss_conf 58877548611222178999999998622677874-89667641166899999999854898834------------520
Q gi|254780163|r 194 LTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPDI------------LLG 260 (798)
Q Consensus 194 LTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~~------------l~~ 260 (798)
T Consensus 5 LyrkyRP~~F~dvvGQe~i~~~L~nal~~~ri~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~pC~~C~~C~~i~~g 84 (557)
T PRK07270 5 LYRKYRSQTFDEMVGQEVVATTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNNCDICRDITNG 84 (557)
T ss_pred HHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 67660899876714819999999999985995404421089986899999999999579998999988877799998758
Q ss_pred --EEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCC----CCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHC--CC
Q ss_conf --14455404675306343123789999999872038----98399973616630155444344777888876630--26
Q gi|254780163|r 261 --ARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESY----ANAILYIDEIHTLVGAGSASGISVDASNLLKPALS--SG 332 (798)
Q Consensus 261 --~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~----~~~ilfideih~ligag~~~g~~~d~an~lkP~L~--rg 332 (798)
T Consensus 85 ~~~DviEida------as~~gV--d~IRei~~~~~~~P~~~~yKV~IIDEah~L---------s~~A~NALLKtLEEPP~ 147 (557)
T PRK07270 85 SLEDVIEIDA------ASNNGV--DEIRDIRDKSTYAPSRATYKVYIIDEVHML---------STGAFNALLKTLEEPTE 147 (557)
T ss_pred CCCCEEEECC------CCCCCH--HHHHHHHHHHCCCCCCCCEEEEEECCHHHC---------CHHHHHHHHHHHHCCCC
T ss_conf 9997487347------776788--999999998423877788389997144534---------99999989998528998
Q ss_pred CEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCC
Q ss_conf 60388730489999985201114320014430687868999999861276654103512111789999986542015556
Q gi|254780163|r 333 AVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKL 412 (798)
Q Consensus 333 ~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~l 412 (798)
T Consensus 148 ~~vFIL~Ttep~--kIl---~TI~SRCQrf~F~~i~~~~i~~~L~~I~~----~E~i~~~~~aL~~Ia~~a~G~mR---- 214 (557)
T PRK07270 148 NVVFILATTELH--KIP---ATILSRVQRFEFKSIKTKAIREHLAWILD----KEGISFEVEALNLIARRAEGGMR---- 214 (557)
T ss_pred CEEEEEEECCHH--HCC---HHHHHHHHHCCCCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHCCCCHH----
T ss_conf 769999849947--592---88874300010888999999999999999----83998699999999997799687----
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 4679889986533
Q gi|254780163|r 413 PDKAIDVIDEAGA 425 (798)
Q Consensus 413 PdkAidllDea~a 425 (798)
T Consensus 215 --dAlsiLdQ~~s 225 (557)
T PRK07270 215 --DALSILDQALS 225 (557)
T ss_pred --HHHHHHHHHHH
T ss_conf --89999999997