HHsearch alignment for GI: 254780163 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=99.07 E-value=5.1e-09 Score=83.95 Aligned_cols=163 Identities=24% Similarity=0.388 Sum_probs=94.2
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC-CCC----E--EEEEHHHHHCCC
Q ss_conf 246653458999999999877520445657874068861432003889999987304-773----3--772068861246
Q gi|254780163|r 475 LGTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL-GVQ----L--LRFDMSEYMERH 547 (798)
Q Consensus 475 l~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~-~~~----l--ir~dmsey~e~~ 547 (798)
T Consensus 2 ~F~~iiGq~~~~~~L~~ai~~~--------rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~~~ri~~~nHPDl~ 73 (314)
T PRK07399 2 LFANLIGQPLAIELLTAAIEQN--------RIAPAYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNIRRRLEEGNHPDLL 73 (314)
T ss_pred CCCCCCCCHHHHHHHHHHHHCC--------CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEE
T ss_conf 8331259499999999999859--------96744877899983299999999999857899997665587518999778
Q ss_pred CC-------CHHCC-----------CCCHHCCCCCCCCCCHHHHHCC----CEEEEECCHHHCCHHHHHHHHHHHHHHHC
Q ss_conf 53-------01104-----------7800025644431003555158----51777404455028999999998777502
Q gi|254780163|r 548 AV-------SRLIG-----------APPGYVGFGQGGILADSVDQNP----YSVVLLDEIEKSHPDVLNILLQIMDYGIL 605 (798)
Q Consensus 548 ~v-------s~LiG-----------appGYvG~~egg~Lte~vr~~P----~sVvl~DEiEKAh~~v~~~llqild~G~l 605 (798)
T Consensus 74 ~i~P~~~~~g~~~~~~~~~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m~~~AaNaLLKtLEEP-- 151 (314)
T PRK07399 74 WVEPTYQHQGKLITASEAEEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETMNEAAANALLKTLEEP-- 151 (314)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCC--
T ss_conf 860562003454557789876530268777879999999999731885688479998897871999999999861478--
Q ss_pred CCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 177997761254299994242145533036898821114889999987288788177682896288999999999999
Q gi|254780163|r 606 TDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHK 683 (798)
Q Consensus 606 td~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~ 683 (798)
T Consensus 152 --~~-------~~fILit~~~~--------------------------~lLpTI~SRC-Q~i~F~~l~~~~i~~~L~~ 193 (314)
T PRK07399 152 --GN-------GTLILIAPSPE--------------------------SLLPTIVSRC-QIIPFYRLSDEQLEQVLKR 193 (314)
T ss_pred --CC-------CEEEEEECCHH--------------------------HCCHHHHCCC-EEEECCCCCHHHHHHHHHH
T ss_conf --78-------56999979936--------------------------4914664187-5633899899999999997