HHsearch alignment for GI: 254780163 and conserved domain: PRK07764
>PRK07764 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.19 E-value=1.4e-10 Score=95.30 Aligned_cols=200 Identities=17% Similarity=0.169 Sum_probs=129.8
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCH-----------HHH--
Q ss_conf 58877548611222178999999998622677874-8966764116689999999985489883-----------452--
Q gi|254780163|r 194 LTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPD-----------ILL-- 259 (798)
Q Consensus 194 LTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~-----------~l~-- 259 (798)
T Consensus 5 LyrkyRP~~F~eviGQe~v~~~L~~Ai~~gri~HAYLFsGprG~GKTt~ARilAkaLNC~~~~~~~PCg~C~sC~~i~~g 84 (775)
T PRK07764 5 LYRRYRPATFAEVVGQEHVTEPLSTALDSGRINHAYLFSGPRGCGKTSSARILARSLNCAQGPTSTPCGVCDSCVALAPG 84 (775)
T ss_pred HHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 66550788766622859999999999981997633762378887888999999999668999998988887637888638
Q ss_pred ---EEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC----CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHC--
Q ss_conf ---01445540467530634312378999999987203----898399973616630155444344777888876630--
Q gi|254780163|r 260 ---GARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES----YANAILYIDEIHTLVGAGSASGISVDASNLLKPALS-- 330 (798)
Q Consensus 260 ---~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~----~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~-- 330 (798)
T Consensus 85 ~~~~~DviEiD------AAS~~gV--ddiReL~e~~~y~P~~~ryKVyIIDEaHml---------s~~afNALLKtLEEP 147 (775)
T PRK07764 85 GPGSLDVVEID------AASHGGV--DDARELRERAFFAPAQSRYRIFIIDEAHMV---------TTAGFNALLKIVEEP 147 (775)
T ss_pred CCCCCCEEEEC------CCCCCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHH---------CHHHHHHHHHHHCCC
T ss_conf 98888668731------5655688--999999985476876786359998535440---------799999998862278
Q ss_pred CCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCC
Q ss_conf 26603887304899999852011143200144306878689999998612766541035121117899999865420155
Q gi|254780163|r 331 SGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSR 410 (798)
Q Consensus 331 rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r 410 (798)
T Consensus 148 P~hvvFIlaTTep~--kip~---TI~SRcq~f~Fr~i~~~~~~~~l~~i~----~~E~i~~~~~al~li~r~~~Gs~RD- 217 (775)
T PRK07764 148 PEHLIFIFATTEPE--KVIG---TIRSRTHHYPFRLVPPGTMRPYLERIC----AQEGVVVDDAVLPLVIRAGGGSPRD- 217 (775)
T ss_pred CCCEEEEEECCCHH--HCCH---HHHHHCCCCCCCCCCHHHHHHHHHHHH----HHCCCCCCHHHHHHHHHHCCCCHHH-
T ss_conf 64627999548735--4716---776410234526699999999999999----9839987989999999982896676-
Q ss_pred CCHHHHHHHHHHHHH
Q ss_conf 564679889986533
Q gi|254780163|r 411 KLPDKAIDVIDEAGA 425 (798)
Q Consensus 411 ~lPdkAidllDea~a 425 (798)
T Consensus 218 -----alS~ldQl~a 227 (775)
T PRK07764 218 -----TLSVLDQLLA 227 (775)
T ss_pred -----HHHHHHHHHH
T ss_conf -----8999999984