HHsearch alignment for GI: 254780163 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=97.17 E-value=0.026 Score=35.79 Aligned_cols=153 Identities=20% Similarity=0.265 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHHHHHHCC-------------CCCCEEEECCCCCHHHHHHHHHHHHHHCCC--CCHH---------H
Q ss_conf 112221789999999986226-------------778748966764116689999999985489--8834---------5
Q gi|254780163|r 203 VDILVGRHEEINRTIQILCRR-------------SKNNPLYVGDPGVGKTAIAEGFAKQIVDGM--VPDI---------L 258 (798)
Q Consensus 203 LDPVIGRd~EI~riiqIL~RR-------------~KNn~~lvG~~gvGktaive~la~~i~~~~--vp~~---------l 258 (798)
T Consensus 4 f~~ivGQe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~~i~ 83 (395)
T PRK07940 4 WDRLVGQDAVVAELRAAARAARADSAHSAAAGSGMTHAWLFTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACRTVL 83 (395)
T ss_pred CHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 01315929999999999983634344333346876603763689987889999999999669999999998787899987
Q ss_pred HEE--EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC----CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC-
Q ss_conf 201--445540467530634312378999999987203----8983999736166301554443447778888766302-
Q gi|254780163|r 259 LGA--RIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES----YANAILYIDEIHTLVGAGSASGISVDASNLLKPALSS- 331 (798)
Q Consensus 259 ~~~--~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~----~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~r- 331 (798)
T Consensus 84 ~g~hpDv~~i~p----~~~~i~---id~iR~l~~~~~~~p~~~~~kv~ii~~a~~m---------~~~a~NalLKtLEEP 147 (395)
T PRK07940 84 AGTHPDVRVVVP----EGLSIG---VDEVREIVQIAARRPTTGRWRIVVIEDADRL---------TERAANALLKAVEEP 147 (395)
T ss_pred CCCCCCEEEEEC----CCCCCC---HHHHHHHHHHHHHCCCCCCCEEEEEECHHHH---------CHHHHHHHHHHHCCC
T ss_conf 689987189826----877688---9999999999852730379559998077874---------899999999852178
Q ss_pred -CCEEEEEECC-HHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHH
Q ss_conf -6603887304-899999852011143200144306878689999998
Q gi|254780163|r 332 -GAVRCIGSTT-YSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVK 377 (798)
Q Consensus 332 -g~~~~IgatT-~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~ 377 (798)
T Consensus 148 p~~~~fiL~t~~~~~l------lpTI~SRcq~~~f~~~~~~~i~~~L~ 189 (395)
T PRK07940 148 PPRTVWLLCAPSVEDV------LPTIRSRCRHVALRTPSVEAVADVLV 189 (395)
T ss_pred CCCEEEEEEECCHHHH------HHHHHHHHEECCCCCCCHHHHHHHHH
T ss_conf 8886999873997874------46887440002379999999999998