HHsearch alignment for GI: 254780163 and conserved domain: PRK08084

>PRK08084 DNA replication initiation factor; Provisional.
Probab=98.64  E-value=3.7e-06  Score=63.39  Aligned_cols=187  Identities=14%  Similarity=0.185  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHH
Q ss_conf             22178999999998622677874-89667641166899999999854898834520144554046753063431237899
Q gi|254780163|r  206 LVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEER  284 (798)
Q Consensus       206 VIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r  284 (798)
T Consensus        25 i~g~n~~~~~al~~~~~~~~~~~l~l~G~~G~GKTHLLqA~~~~~~~~-------~~~~~yl~~~~~----------~~~   87 (235)
T PRK08084         25 YPGDNDSLLAALQNVLRQEHSGYIYLWGREGAGRSHLLHAACAELSQR-------GDAVGYVPLDKR----------AWF   87 (235)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC-------CCCEEEEEHHHH----------HHH
T ss_conf             448869999999999857898769998999988899999999999707-------985799877986----------651


Q ss_pred             HHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEE-CCHHHHHHHHHCCHHHHHHCE---
Q ss_conf             9999987203898399973616630155444344777888876630266038873-048999998520111432001---
Q gi|254780163|r  285 IKKIVKEIESYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSGAVRCIGS-TTYSEYRQFFEKDKALVRRFQ---  360 (798)
Q Consensus       285 ~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg~~~~Iga-tT~~ey~~~~e~d~al~rrF~---  360 (798)
T Consensus        88 ~~~~l~~l~~~--dll~iDDi~~i~g~~~~ee---~lF~l~N~~~~~g~~~ll~ts~~~P~~l~~~l--~DL~SRl~~g~  160 (235)
T PRK08084         88 VPEVLEGMEQL--SLVCIDNIECIAGDELWEM---AIFDLYNRILESGKTRLLITGDRPPRQLNLGL--PDLASRLDWGQ  160 (235)
T ss_pred             HHHHHHHHHHC--CEEEEECHHHHCCCHHHHH---HHHHHHHHHHHHCCCEEEEECCCCHHHCCCCC--HHHHHHHHCCC
T ss_conf             79999876418--9899827455469978999---99999999998489669996798824302312--88999995697


Q ss_pred             EEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             443068786899999986127665410351211178999998654201555646798899865
Q gi|254780163|r  361 KIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDEA  423 (798)
Q Consensus       361 ~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDea  423 (798)
T Consensus       161 ~~~i~~~dde~~~~iL~~~----a~~rgl~l~~~V~~yl~~~~~R~~~~---L~~~l~~Ld~~  216 (235)
T PRK08084        161 IYKLQPLSDEEKLQALQLR----ARLRGFELPEDVGRFLLKRLDREMRT---LFMTLDQLDKA  216 (235)
T ss_pred             EEEECCCCHHHHHHHHHHH----HHHCCCCCCHHHHHHHHHHCCCCHHH---HHHHHHHHHHH
T ss_conf             2785599989999999999----99739999989999999861588999---99999999999