HHsearch alignment for GI: 254780163 and conserved domain: PRK08116

Probab=97.60  E-value=0.0023  Score=43.32  Aligned_cols=128  Identities=19%  Similarity=0.345  Sum_probs=72.7

Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCC--CCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             7489667641166899999999854898834520144554046753063--43123789999999872038983999736
Q gi|254780163|r  227 NPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGT--RYRGDFEERIKKIVKEIESYANAILYIDE  304 (798)
Q Consensus       227 n~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~--~~rg~fe~r~~~~~~~~~~~~~~ilfide  304 (798)
T Consensus       110 GLll~G~~GtGKThLa~aIa~~l~~~-------g~~V~~~~~~~ll~~lk~~~~~~~~~~~~e~l~~l~~~--dLLIiDD  180 (262)
T PRK08116        110 GLLLWGSPGNGKTYLAAAIANELIEK-------GVPVVFVNVPELLNRIKSTYNSEGKEDENEIIRALDNA--DLLILDD  180 (262)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHC-------CCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC--CEEEEEH
T ss_conf             18998989998999999999999987-------99399988999999999998635610199999986129--9899832


Q ss_pred             HHHHHCCCCCCCCCCCHHHHHHHHHC---CCCEEEEEEC--CHHHHHHHHHCCHHHHHH---CEEEEECCCCHHH
Q ss_conf             16630155444344777888876630---2660388730--489999985201114320---0144306878689
Q gi|254780163|r  305 IHTLVGAGSASGISVDASNLLKPALS---SGAVRCIGST--TYSEYRQFFEKDKALVRR---FQKIDVSEPSIED  371 (798)
Q Consensus       305 ih~ligag~~~g~~~d~an~lkP~L~---rg~~~~Igat--T~~ey~~~~e~d~al~rr---F~~i~v~ep~~~~  371 (798)
T Consensus       181 l----G~e--~~t~w-~~e~lf~IIn~Ry~~~kptIiTTNl~~~eL~~~~~-~Ri~sRl~e~~~~v~~~G~d~R~  247 (262)
T PRK08116        181 L----GAE--KDTEW-VREKLYNIIDSRYRKGLPTIFTTNLSLEELKNQYG-KRTYSRILEMCTPVKNEGKSYRR  247 (262)
T ss_pred             H----CCC--CCCHH-HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH-HHHHHHHHHCCEEEEEECCCHHH
T ss_conf             2----145--69878-99999999999997699989987999999999863-79999998677899851778879