HHsearch alignment for GI: 254780163 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.06 E-value=3.2e-09 Score=85.45 Aligned_cols=198 Identities=21% Similarity=0.261 Sum_probs=126.6
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEECCCCCHHHHHHHHHHHHHHCCC----CCH----------HHHE
Q ss_conf 87754861122217899999999862267787-48966764116689999999985489----883----------4520
Q gi|254780163|r 196 EKVKKGKVDILVGRHEEINRTIQILCRRSKNN-PLYVGDPGVGKTAIAEGFAKQIVDGM----VPD----------ILLG 260 (798)
Q Consensus 196 e~AreGKLDPVIGRd~EI~riiqIL~RR~KNn-~~lvG~~gvGktaive~la~~i~~~~----vp~----------~l~~ 260 (798)
T Consensus 8 rk~RP~~F~e~vGQ~~v~~~L~nal~~~rl~haylf~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~C~~C~~i~~g~~ 87 (704)
T PRK08691 8 RKWRPKTFADLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRY 87 (704)
T ss_pred HHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 65188747564186999999999998199752375027898788899999999967999999997877776787855899
Q ss_pred EEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC---CCC-EEEEECCHHHHHCCCCCCCCCCCHHH-HHHHHHC--CCC
Q ss_conf 1445540467530634312378999999987203---898-39997361663015544434477788-8876630--266
Q gi|254780163|r 261 ARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES---YAN-AILYIDEIHTLVGAGSASGISVDASN-LLKPALS--SGA 333 (798)
Q Consensus 261 ~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~---~~~-~ilfideih~ligag~~~g~~~d~an-~lkP~L~--rg~ 333 (798)
T Consensus 88 ~D~~EiDaAs------~~~v--dd~R~l~~~~~y~P~~~~yKVyiiDEvhmLs---------~~afNAlLK-tLEEPP~~ 149 (704)
T PRK08691 88 VDLLEIDAAS------NTGI--DNIREVLENAQYAPTAGKYKVYIIDEVHMLS---------KSAFNAMLK-TLEEPPEH 149 (704)
T ss_pred CCEEEEECCC------CCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHCC---------HHHHHHHHH-HHCCCCCC
T ss_conf 8747742454------4588--9999999853468867853599983154438---------999999998-61479756
Q ss_pred EEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCH
Q ss_conf 03887304899999852011143200144306878689999998612766541035121117899999865420155564
Q gi|254780163|r 334 VRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLP 413 (798)
Q Consensus 334 ~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lP 413 (798)
T Consensus 150 v~FilaTTdp~--Kl--p~TIlSR-C~~f~l~~~~~~~i~~~L~~i~~----~E~i~~e~~al~~ia~~a~Gs~RD---- 216 (704)
T PRK08691 150 VKFILATTDPH--KV--PVTVLSR-CLQFVLRNMTAQQVADHLAHVLD----SEKIAYEPPALQLLGRAAAGSMRD---- 216 (704)
T ss_pred EEEEEECCCHH--HC--CHHHHHH-HHHHCCCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHCCCCHHH----
T ss_conf 08998548846--47--5899988-87710268999999999999999----839856899999999975785777----
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 6798899865333
Q gi|254780163|r 414 DKAIDVIDEAGAS 426 (798)
Q Consensus 414 dkAidllDea~a~ 426 (798)
T Consensus 217 --alslldQaia~ 227 (704)
T PRK08691 217 --ALSLLDQAIAL 227 (704)
T ss_pred --HHHHHHHHHHH
T ss_conf --98899999996